RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 IGBP1P78318 339 aa17.51■□□□□ 0.39
CCDC113-203ENST00000561517 MGAT3Q09327 533 aa17.51■□□□□ 0.39
CCDC113-203ENST00000561517 GRIN2CQ14957 1233 aa17.51■□□□□ 0.39
CCDC113-203ENST00000561517 RSPH3Q86UC2 560 aa17.51■□□□□ 0.39
CCDC113-203ENST00000561517 HERC6Q8IVU3 1022 aa17.51■□□□□ 0.39
CCDC113-203ENST00000561517 PCDHA2Q9Y5H9 948 aa17.51■□□□□ 0.39
CCDC113-203ENST00000561517 COL1A2P08123 1366 aa17.51■□□□□ 0.39
CCDC113-203ENST00000561517 COL6A3P12111 3177 aa17.5■□□□□ 0.39
CCDC113-203ENST00000561517 RBAK-RBAKDNI3L0D1 243 aa17.5■□□□□ 0.39
CCDC113-203ENST00000561517 GAS7O60861 476 aa17.5■□□□□ 0.39
CCDC113-203ENST00000561517 MYOGP15173 224 aa17.5■□□□□ 0.39
CCDC113-203ENST00000561517 LRCH2Q5VUJ6 765 aa17.5■□□□□ 0.39
CCDC113-203ENST00000561517 PPP4R3AQ6IN85 833 aa17.5■□□□□ 0.39
CCDC113-203ENST00000561517 B3GNT9Q6UX72 402 aa17.5■□□□□ 0.39
CCDC113-203ENST00000561517 NEK8Q86SG6 692 aa17.5■□□□□ 0.39
CCDC113-203ENST00000561517 ETNPPLQ8TBG4 499 aa17.5■□□□□ 0.39
CCDC113-203ENST00000561517 TRAPPC12Q8WVT3 735 aa17.5■□□□□ 0.39
CCDC113-203ENST00000561517 DNAJB3Q8WWF6 145 aa17.5■□□□□ 0.39
CCDC113-203ENST00000561517 MYLIPQ8WY64 445 aa17.5■□□□□ 0.39
CCDC113-203ENST00000561517 TNFRSF25Q93038 417 aa17.5■□□□□ 0.39
CCDC113-203ENST00000561517 ZBTB10Q96DT7 871 aa17.5■□□□□ 0.39
CCDC113-203ENST00000561517 ZSCAN31Q96LW9 406 aaPredicted RBP17.5■□□□□ 0.39
CCDC113-203ENST00000561517 TEKT3Q9BXF9 490 aa17.5■□□□□ 0.39
CCDC113-203ENST00000561517 SLC28A3Q9HAS3 691 aa17.5■□□□□ 0.39
CCDC113-203ENST00000561517 DISC1Q9NRI5 854 aa17.5■□□□□ 0.39
CCDC113-203ENST00000561517 IGSF9BQ9UPX0 1349 aa17.49■□□□□ 0.39
CCDC113-203ENST00000561517 TTC3P53804 2025 aa17.49■□□□□ 0.39
CCDC113-203ENST00000561517 SMIM35A0A1B0GVV1 85 aa17.49■□□□□ 0.39
CCDC113-203ENST00000561517 ZBTB42B2RXF5 422 aa17.49■□□□□ 0.39
CCDC113-203ENST00000561517 GCFC2P16383 781 aaKnown RBP17.49■□□□□ 0.39
CCDC113-203ENST00000561517 SFNP31947 248 aa17.49■□□□□ 0.39
CCDC113-203ENST00000561517 KRT2P35908 639 aa17.49■□□□□ 0.39
CCDC113-203ENST00000561517 JAK3P52333 1124 aa17.49■□□□□ 0.39
CCDC113-203ENST00000561517 DEFB103AP81534 67 aa17.49■□□□□ 0.39
CCDC113-203ENST00000561517 LETM2Q2VYF4 491 aa17.49■□□□□ 0.39
CCDC113-203ENST00000561517 ZNF484Q5JVG2 852 aa17.49■□□□□ 0.39
CCDC113-203ENST00000561517 MTHFD1LQ6UB35 978 aa17.49■□□□□ 0.39
CCDC113-203ENST00000561517 PIK3AP1Q6ZUJ8 805 aa17.49■□□□□ 0.39
CCDC113-203ENST00000561517 RDM1Q8NG50 284 aa17.49■□□□□ 0.39
CCDC113-203ENST00000561517 BBXQ8WY36 941 aaPredicted RBP17.49■□□□□ 0.39
CCDC113-203ENST00000561517 SEPT8Q92599 483 aa17.49■□□□□ 0.39
CCDC113-203ENST00000561517 GJA10Q969M2 543 aa17.49■□□□□ 0.39
CCDC113-203ENST00000561517 LLPHQ9BRT6 129 aaKnown RBP17.49■□□□□ 0.39
CCDC113-203ENST00000561517 UNC45AQ9H3U1 944 aa17.49■□□□□ 0.39
CCDC113-203ENST00000561517 GABBR1Q9UBS5 961 aa17.49■□□□□ 0.39
CCDC113-203ENST00000561517 DDX25Q9UHL0 483 aaKnown RBP17.49■□□□□ 0.39
CCDC113-203ENST00000561517 KIF28PB7ZC32 967 aa17.48■□□□□ 0.39
CCDC113-203ENST00000561517 SLC37A4O43826 429 aa17.48■□□□□ 0.39
CCDC113-203ENST00000561517 MMP1P03956 469 aa17.48■□□□□ 0.39
CCDC113-203ENST00000561517 KLRC1P26715 233 aa17.48■□□□□ 0.39
CCDC113-203ENST00000561517 MRPS6P82932 125 aaKnown RBP17.48■□□□□ 0.39
CCDC113-203ENST00000561517 NR5A1Q13285 461 aa17.48■□□□□ 0.39
CCDC113-203ENST00000561517 EARS2Q5JPH6 523 aaKnown RBP17.48■□□□□ 0.39
CCDC113-203ENST00000561517 CCDC83Q8IWF9 413 aa17.48■□□□□ 0.39
CCDC113-203ENST00000561517 APBB2Q92870 758 aa17.48■□□□□ 0.39
CCDC113-203ENST00000561517 NAP1L4Q99733 375 aaKnown RBP17.48■□□□□ 0.39
CCDC113-203ENST00000561517 FAM49AQ9H0Q0 323 aaPredicted RBP17.48■□□□□ 0.39
CCDC113-203ENST00000561517 BRMS1Q9HCU9 246 aa17.48■□□□□ 0.39
CCDC113-203ENST00000561517 KCNMB3Q9NPA1 279 aa17.48■□□□□ 0.39
CCDC113-203ENST00000561517 SH2B1Q9NRF2 756 aaPredicted RBP17.48■□□□□ 0.39
CCDC113-203ENST00000561517 SAMM50Q9Y512 469 aa17.48■□□□□ 0.39
CCDC113-203ENST00000561517 CDY2AQ9Y6F7 541 aa17.48■□□□□ 0.39
CCDC113-203ENST00000561517 CHD7Q9P2D1 2997 aa17.47■□□□□ 0.39
CCDC113-203ENST00000561517 ZNF862O60290 1169 aa17.47■□□□□ 0.39
CCDC113-203ENST00000561517 LPIN1Q14693 890 aa17.47■□□□□ 0.39
CCDC113-203ENST00000561517 RABEP1Q15276 862 aa17.47■□□□□ 0.39
CCDC113-203ENST00000561517 FBXO47Q5MNV8 452 aa17.47■□□□□ 0.39
CCDC113-203ENST00000561517 PPP2R2DQ66LE6 453 aa17.47■□□□□ 0.39
CCDC113-203ENST00000561517 KRT40Q6A162 431 aa17.47■□□□□ 0.39
CCDC113-203ENST00000561517 CKAP2LQ8IYA6 745 aa17.47■□□□□ 0.39
CCDC113-203ENST00000561517 NME8Q8N427 588 aa17.47■□□□□ 0.39
CCDC113-203ENST00000561517 FAM167AQ96KS9 214 aa17.47■□□□□ 0.39
CCDC113-203ENST00000561517 FAM20AQ96MK3 541 aa17.47■□□□□ 0.39
CCDC113-203ENST00000561517 IFIH1Q9BYX4 1025 aaKnown RBP17.47■□□□□ 0.39
CCDC113-203ENST00000561517 SQORQ9Y6N5 450 aa17.47■□□□□ 0.39
CCDC113-203ENST00000561517 KDM3AQ9Y4C1 1321 aa17.47■□□□□ 0.39
CCDC113-203ENST00000561517 PRRC2BQ5JSZ5 2229 aaKnown RBP17.46■□□□□ 0.39
CCDC113-203ENST00000561517 FAM205CA6NFA0 338 aa17.46■□□□□ 0.39
CCDC113-203ENST00000561517 CHMP2AO43633 222 aa17.46■□□□□ 0.39
CCDC113-203ENST00000561517 TLL1O43897 1013 aa17.46■□□□□ 0.39
CCDC113-203ENST00000561517 GJB5O95377 273 aa17.46■□□□□ 0.39
CCDC113-203ENST00000561517 CA3P07451 260 aa17.46■□□□□ 0.39
CCDC113-203ENST00000561517 GHRP10912 638 aa17.46■□□□□ 0.39
CCDC113-203ENST00000561517 IER5Q5VY09 327 aa17.46■□□□□ 0.39
CCDC113-203ENST00000561517 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.46■□□□□ 0.39
CCDC113-203ENST00000561517 MIER3Q7Z3K6 550 aa17.46■□□□□ 0.39
CCDC113-203ENST00000561517 TMCO2Q7Z6W1 182 aaPredicted RBP17.46■□□□□ 0.39
CCDC113-203ENST00000561517 IL27Q8NEV9 243 aa17.46■□□□□ 0.39
CCDC113-203ENST00000561517 TRPV2Q9Y5S1 764 aa17.46■□□□□ 0.39
CCDC113-203ENST00000561517 CDH23Q9H251 3354 aa17.46■□□□□ 0.39
CCDC113-203ENST00000561517 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.45■□□□□ 0.38
CCDC113-203ENST00000561517 BTBD18B2RXH4 712 aa17.45■□□□□ 0.38
CCDC113-203ENST00000561517 TBX3O15119 743 aa17.45■□□□□ 0.38
CCDC113-203ENST00000561517 CCNT1O60563 726 aaKnown RBP17.45■□□□□ 0.38
CCDC113-203ENST00000561517 C22orf31O95567 290 aa17.45■□□□□ 0.38
CCDC113-203ENST00000561517 AMHP03971 560 aa17.45■□□□□ 0.38
CCDC113-203ENST00000561517 FOSL2P15408 326 aa17.45■□□□□ 0.38
CCDC113-203ENST00000561517 TRIM29Q14134 588 aa17.45■□□□□ 0.38
CCDC113-203ENST00000561517 UGCGQ16739 394 aa17.45■□□□□ 0.38
CCDC113-203ENST00000561517 TSHZ1Q6ZSZ6 1077 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms