RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 SPATA6Q9NWH7 488 aaPredicted RBP5.08□□□□□ -1.6
HERC1-215ENST00000561436 MYOTQ9UBF9 498 aa5.08□□□□□ -1.6
HERC1-215ENST00000561436 WASF3Q9UPY6 502 aa5.08□□□□□ -1.6
HERC1-215ENST00000561436 ATP8A1Q9Y2Q0 1164 aa5.08□□□□□ -1.6
HERC1-215ENST00000561436 TELO2Q9Y4R8 837 aa5.08□□□□□ -1.6
HERC1-215ENST00000561436 DENND4BO75064 1496 aaPredicted RBP5.07□□□□□ -1.6
HERC1-215ENST00000561436 CCDC66A2RUB6 948 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 OTOL1A6NHN0 477 aaPredicted RBP5.07□□□□□ -1.6
HERC1-215ENST00000561436 KRIT1O00522 736 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 WNT9AO14904 365 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 HGSO14964 777 aaPredicted RBP5.07□□□□□ -1.6
HERC1-215ENST00000561436 CYP2C8P10632 490 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 HOXA5P20719 270 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 SLC6A11P48066 632 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 AMPD3Q01432 767 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 ARHGAP44Q17R89 818 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 CR1LQ2VPA4 569 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 PKN3Q6P5Z2 889 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 TMC5Q6UXY8 1006 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 C16orf59Q7L2K0 433 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 C11orf74Q86VG3 221 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 SIAH1Q8IUQ4 282 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 UBR7Q8N806 425 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 MARCH10Q8NA82 808 aaPredicted RBP5.07□□□□□ -1.6
HERC1-215ENST00000561436 PCDH19Q8TAB3 1148 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 C20orf173Q96LM9 149 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 KCNC2Q96PR1 638 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 TTC1Q99614 292 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 YIPF4Q9BSR8 244 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 CD244Q9BZW8 370 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 HOMER2Q9NSB8 354 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 TYW1Q9NV66 732 aaKnown RBP5.07□□□□□ -1.6
HERC1-215ENST00000561436 ABCA8O94911 1581 aa5.07□□□□□ -1.6
HERC1-215ENST00000561436 YEATS2Q9ULM3 1422 aa5.06□□□□□ -1.6
HERC1-215ENST00000561436 KIAA0556O60303 1618 aa5.06□□□□□ -1.6
HERC1-215ENST00000561436 A0A0G2JLL6 359 aaPredicted RBP5.06□□□□□ -1.6
HERC1-215ENST00000561436 M0R2C6 588 aa5.06□□□□□ -1.6
HERC1-215ENST00000561436 TADA3O75528 432 aa5.06□□□□□ -1.6
HERC1-215ENST00000561436 ITGA1P56199 1179 aa5.06□□□□□ -1.6
HERC1-215ENST00000561436 STRN3Q13033 797 aa5.06□□□□□ -1.6
HERC1-215ENST00000561436 RTP5Q14D33 572 aa5.06□□□□□ -1.6
HERC1-215ENST00000561436 TMEM177Q53S58 311 aa5.06□□□□□ -1.6
HERC1-215ENST00000561436 MIB1Q86YT6 1006 aa5.06□□□□□ -1.6
HERC1-215ENST00000561436 FAM126BQ8IXS8 530 aa5.06□□□□□ -1.6
HERC1-215ENST00000561436 C2orf69Q8N8R5 385 aa5.06□□□□□ -1.6
HERC1-215ENST00000561436 LINC01356Q8N9X3 169 aa5.06□□□□□ -1.6
HERC1-215ENST00000561436 CHST14Q8NCH0 376 aa5.06□□□□□ -1.6
HERC1-215ENST00000561436 CLEC4DQ8WXI8 215 aa5.06□□□□□ -1.6
HERC1-215ENST00000561436 CPA5Q8WXQ8 436 aa5.06□□□□□ -1.6
HERC1-215ENST00000561436 ORAI3Q9BRQ5 295 aa5.06□□□□□ -1.6
HERC1-215ENST00000561436 IFT22Q9H7X7 185 aa5.06□□□□□ -1.6
HERC1-215ENST00000561436 METTL14Q9HCE5 456 aaKnown RBP5.06□□□□□ -1.6
HERC1-215ENST00000561436 PARD6AQ9NPB6 346 aa5.06□□□□□ -1.6
HERC1-215ENST00000561436 ZNF652Q9Y2D9 606 aa5.06□□□□□ -1.6
HERC1-215ENST00000561436 PCF11O94913 1555 aaKnown RBP5.05□□□□□ -1.6
HERC1-215ENST00000561436 TCRBV5S4A2TA0A5A2 114 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 KRTAP9-7A8MTY7 169 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 CBX4O00257 560 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 ZEB2O60315 1214 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 HIP1RO75146 1068 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 GLRX3O76003 335 aaKnown RBP5.05□□□□□ -1.6
HERC1-215ENST00000561436 LRG1P02750 347 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 PYGMP11217 842 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 KRT15P19012 456 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 SLURP1P55000 103 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 IL2P60568 153 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 GPR19Q15760 415 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 EFCAB2Q5VUJ9 269 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 LIPIQ6XZB0 460 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 TTLL10Q6ZVT0 673 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 OTOP3Q7RTS5 596 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 SAPCD2Q86UD0 394 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 FERMT3Q86UX7 667 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 DDX42Q86XP3 938 aaKnown RBP eCLIP5.05□□□□□ -1.6
HERC1-215ENST00000561436 PASD1Q8IV76 773 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 TMEM151BQ8IW70 566 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 AFAP1L2Q8N4X5 818 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 PRPF38AQ8NAV1 312 aaKnown RBP5.05□□□□□ -1.6
HERC1-215ENST00000561436 SCYL1Q96KG9 808 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 C11orf84Q9BUA3 381 aaPredicted RBP5.05□□□□□ -1.6
HERC1-215ENST00000561436 XYLT2Q9H1B5 865 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 APOBEC2Q9Y235 224 aaKnown RBP5.05□□□□□ -1.6
HERC1-215ENST00000561436 COQ6Q9Y2Z9 468 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 FANCAO15360 1455 aa5.05□□□□□ -1.6
HERC1-215ENST00000561436 PPRC1Q5VV67 1664 aaKnown RBP5.05□□□□□ -1.6
HERC1-215ENST00000561436 ADAM9Q13443 819 aa5.04□□□□□ -1.6
HERC1-215ENST00000561436 TUSC3Q13454 348 aa5.04□□□□□ -1.6
HERC1-215ENST00000561436 PCBP1Q15365 356 aaKnown RBP eCLIP5.04□□□□□ -1.6
HERC1-215ENST00000561436 KRTAP19-4Q3LI73 84 aa5.04□□□□□ -1.6
HERC1-215ENST00000561436 RGL3Q3MIN7 710 aa5.04□□□□□ -1.6
HERC1-215ENST00000561436 EMC4Q5J8M3 183 aa5.04□□□□□ -1.6
HERC1-215ENST00000561436 RNF219Q5W0B1 726 aaPredicted RBP5.04□□□□□ -1.6
HERC1-215ENST00000561436 FSTL4Q6MZW2 842 aa5.04□□□□□ -1.6
HERC1-215ENST00000561436 TEPPQ6URK8 271 aa5.04□□□□□ -1.6
HERC1-215ENST00000561436 NLGN4XQ8N0W4 816 aa5.04□□□□□ -1.6
HERC1-215ENST00000561436 CISD2Q8N5K1 135 aaKnown RBP5.04□□□□□ -1.6
HERC1-215ENST00000561436 WDR66Q8TBY9 1149 aa5.04□□□□□ -1.6
HERC1-215ENST00000561436 SH3RF2Q8TEC5 729 aa5.04□□□□□ -1.6
HERC1-215ENST00000561436 SLC6A20Q9NP91 592 aa5.04□□□□□ -1.6
HERC1-215ENST00000561436 DDX56Q9NY93 547 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms