RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 KCNJ6P48051 423 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 MRPS5P82675 430 aaKnown RBP8.36□□□□□ -1.07
GABPB1-211ENST00000561010 GHRHRQ02643 423 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 TROAPQ12815 778 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 GRB10Q13322 594 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 LAMC2Q13753 1193 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 LINC01559Q495D7 138 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 USP17L6PQ6QN14 398 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.36□□□□□ -1.07
GABPB1-211ENST00000561010 RALYLQ86SE5 291 aaKnown RBP8.36□□□□□ -1.07
GABPB1-211ENST00000561010 ZNF598Q86UK7 904 aaKnown RBP8.36□□□□□ -1.07
GABPB1-211ENST00000561010 NCOA7Q8NI08 942 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 CAGE1Q8TC20 777 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 IGDCC4Q8TDY8 1250 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 AFAP1L1Q8TED9 768 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 C16orf70Q9BSU1 422 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 LRRC2Q9BYS8 371 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 LY9Q9HBG7 655 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 ERICH2A1L162 156 aa8.35□□□□□ -1.07
GABPB1-211ENST00000561010 TREHO43280 583 aa8.35□□□□□ -1.07
GABPB1-211ENST00000561010 DGAT1O75907 488 aa8.35□□□□□ -1.07
GABPB1-211ENST00000561010 CD2BP2O95400 341 aaKnown RBP8.35□□□□□ -1.07
GABPB1-211ENST00000561010 LGALS2P05162 132 aa8.35□□□□□ -1.07
GABPB1-211ENST00000561010 SMIM10L2AP0DMW4 78 aa8.35□□□□□ -1.07
GABPB1-211ENST00000561010 SMIM10L2BP0DMW5 78 aa8.35□□□□□ -1.07
GABPB1-211ENST00000561010 HOXD8P13378 290 aaPredicted RBP8.35□□□□□ -1.07
GABPB1-211ENST00000561010 THPOP40225 353 aa8.35□□□□□ -1.07
GABPB1-211ENST00000561010 PTK7Q13308 1070 aa8.35□□□□□ -1.07
GABPB1-211ENST00000561010 UBE2SQ16763 222 aa8.35□□□□□ -1.07
GABPB1-211ENST00000561010 UTP14CQ5TAP6 766 aaKnown RBP8.35□□□□□ -1.07
GABPB1-211ENST00000561010 CNKSR3Q6P9H4 555 aa8.35□□□□□ -1.07
GABPB1-211ENST00000561010 CYFIP1Q7L576 1253 aa8.35□□□□□ -1.07
GABPB1-211ENST00000561010 ZNF654Q8IZM8 581 aa8.35□□□□□ -1.07
GABPB1-211ENST00000561010 CCDC82Q8N4S0 544 aa8.35□□□□□ -1.07
GABPB1-211ENST00000561010 CCDC155Q8N6L0 562 aa8.35□□□□□ -1.07
GABPB1-211ENST00000561010 ATXN2LQ8WWM7 1075 aaKnown RBP8.35□□□□□ -1.07
GABPB1-211ENST00000561010 RUFY2Q8WXA3 655 aa8.35□□□□□ -1.07
GABPB1-211ENST00000561010 BAP1Q92560 729 aa8.35□□□□□ -1.07
GABPB1-211ENST00000561010 UHRF1Q96T88 793 aaPredicted RBP8.35□□□□□ -1.07
GABPB1-211ENST00000561010 MLXIPQ9HAP2 919 aa8.35□□□□□ -1.07
GABPB1-211ENST00000561010 PKD2L1Q9P0L9 805 aa8.35□□□□□ -1.07
GABPB1-211ENST00000561010 FRMPD4Q14CM0 1322 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 COL4A6Q14031 1691 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 PRC1O43663 620 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 GPR37L1O60883 481 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 BAIAP3O94812 1187 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 CXCL10P02778 98 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 RBL2Q08999 1139 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 AGERQ15109 404 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 PDXDC2PQ6P474 469 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 CATIPQ7Z7H3 387 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 SERINC5Q86VE9 423 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 SRBD1Q8N5C6 995 aaKnown RBP8.34□□□□□ -1.07
GABPB1-211ENST00000561010 ZNF511Q8NB15 262 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 DBF4BQ8NFT6 615 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 PHOSPHO2Q8TCD6 241 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 MAP4K1Q92918 833 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 ATP6V0A1Q93050 837 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 ZBTB10Q96DT7 871 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 TCEANC2Q96MN5 208 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 KATNAL1Q9BW62 490 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 LSG1Q9H089 658 aaKnown RBP8.34□□□□□ -1.07
GABPB1-211ENST00000561010 RNPEPQ9H4A4 650 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 AAASQ9NRG9 546 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 SETD4Q9NVD3 440 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 MYO10Q9HD67 2058 aa8.34□□□□□ -1.07
GABPB1-211ENST00000561010 C17orf102A2RUQ5 167 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 LINC01553A4QN01 128 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 SPATA31C2B4DYI2 1134 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 KIF28PB7ZC32 967 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 H3BRB1 525 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 NOP56O00567 594 aaKnown RBP8.33□□□□□ -1.08
GABPB1-211ENST00000561010 SH2B2O14492 632 aaPredicted RBP8.33□□□□□ -1.08
GABPB1-211ENST00000561010 MEIS2O14770 477 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 SLC27A2O14975 620 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 ATP9AO75110 1047 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 PPFIA4O75335 1185 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 LGR5O75473 907 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 UPP2O95045 317 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 GJB5O95377 273 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 BMP1P13497 986 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 MARK3P27448 753 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 NT5C2P49902 561 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 PTK2Q05397 1052 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 SART3Q15020 963 aaKnown RBP8.33□□□□□ -1.08
GABPB1-211ENST00000561010 PKDCCQ504Y2 493 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 LCE2CQ5TA81 110 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 NFXL1Q6ZNB6 911 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 RUFY4Q6ZNE9 571 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 MYOCDQ8IZQ8 938 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 SMARCC2Q8TAQ2 1214 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 RRP36Q96EU6 259 aaKnown RBP8.33□□□□□ -1.08
GABPB1-211ENST00000561010 PGBD1Q96JS3 809 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 INPP4AQ96PE3 977 aaPredicted RBP8.33□□□□□ -1.08
GABPB1-211ENST00000561010 GPR20Q99678 358 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 C17orf80Q9BSJ5 609 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 MAF1Q9H063 256 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 TUT1Q9H6E5 874 aaKnown RBP8.33□□□□□ -1.08
GABPB1-211ENST00000561010 SUGCTQ9HAC7 445 aa8.33□□□□□ -1.08
GABPB1-211ENST00000561010 DACH1Q9UI36 760 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms