RNA–Protein interactions for RNA: ENST00000560944.1

CERS3-208, Transcript of ceramide synthase 3, human

TSL 3

Gene CERS3, Length 448 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CERS3-208	ENST00000560944	CKAP2L	Q8IYA6	745 aa		12.63	□□□□□ -0.39
CERS3-208	ENST00000560944	FSIP1	Q8NA03	581 aa		12.63	□□□□□ -0.39
CERS3-208	ENST00000560944	WNT8B	Q93098	351 aa		12.63	□□□□□ -0.39
CERS3-208	ENST00000560944	SENP6	Q9GZR1	1112 aa	Predicted RBP	12.63	□□□□□ -0.39
CERS3-208	ENST00000560944	POLD4	Q9HCU8	107 aa		12.63	□□□□□ -0.39
CERS3-208	ENST00000560944	DDX19A	Q9NUU7	478 aa	Known RBP	12.63	□□□□□ -0.39
CERS3-208	ENST00000560944	HDAC6	Q9UBN7	1215 aa		12.63	□□□□□ -0.39
CERS3-208	ENST00000560944	KIAA1024	Q9UPX6	916 aa		12.63	□□□□□ -0.39
CERS3-208	ENST00000560944	TRPC6	Q9Y210	931 aa		12.63	□□□□□ -0.39
CERS3-208	ENST00000560944	MAFB	Q9Y5Q3	323 aa	Predicted RBP	12.63	□□□□□ -0.39
CERS3-208	ENST00000560944	MORC2	Q9Y6X9	1032 aa	Predicted RBP	12.63	□□□□□ -0.39
CERS3-208	ENST00000560944	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	DDX11L8	A8MPP1	907 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944		H3BRB1	525 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	PPFIA4	O75335	1185 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	PRPF40A	O75400	957 aa	Known RBP	12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	COL6A1	P12109	1028 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	PFKFB1	P16118	471 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	LIG1	P18858	919 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	LONP1	P36776	959 aa	Known RBP	12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	QARS	P47897	775 aa	Known RBP	12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	LRRC26	Q2I0M4	334 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	MTERF2	Q49AM1	385 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	FAM47C	Q5HY64	1035 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	FAM160B1	Q5W0V3	765 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	GDF6	Q6KF10	455 aa	Predicted RBP	12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	RUFY4	Q6ZNE9	571 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	UBE2Q1	Q7Z7E8	422 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	GRAMD1C	Q8IYS0	662 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	ARRDC4	Q8NCT1	418 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	RDM1	Q8NG50	284 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	AFAP1L1	Q8TED9	768 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	LMBR1	Q8WVP7	490 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	VTI1A	Q96AJ9	217 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	CTAGE1	Q96RT6	745 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	POLR3C	Q9BUI4	534 aa	Predicted RBP	12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	SCAND2P	Q9GZW5	306 aa	Predicted RBP	12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	TRPV6	Q9H1D0	765 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	TUT1	Q9H6E5	874 aa	Known RBP	12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	BLOC1S4	Q9NUP1	217 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	TRMT13	Q9NUP7	481 aa	Known RBP	12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	SETD4	Q9NVD3	440 aa		12.62	□□□□□ -0.39
CERS3-208	ENST00000560944	NPHP3-ACAD11	A0A0J9YXS1	232 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	P4HB	P07237	508 aa	Known RBP	12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	INSRR	P14616	1297 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	RPA1	P27694	616 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	CASP1	P29466	404 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	NDUFA8	P51970	172 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	PSMC5	P62195	406 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	PPFIA1	Q13136	1202 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	DRP2	Q13474	957 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	PDIA5	Q14554	519 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	DHX8	Q14562	1220 aa	Known RBP	12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	GRIK4	Q16099	956 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	TRIM60	Q495X7	471 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	NAALADL2	Q58DX5	795 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	KRT79	Q5XKE5	535 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	TMEM87A	Q8NBN3	555 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	PCSK9	Q8NBP7	692 aa	Known RBP	12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	ATP8B4	Q8TF62	1192 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	STAM	Q92783	540 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	DHX58	Q96C10	678 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	PPP1R16B	Q96T49	567 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	RUSC1	Q9BVN2	902 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	SMARCAD1	Q9H4L7	1026 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	AZI2	Q9H6S1	392 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	TUFT1	Q9NNX1	390 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	STARD7	Q9NQZ5	370 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	ERAP1	Q9NZ08	941 aa		12.61	□□□□□ -0.39
CERS3-208	ENST00000560944	MOXD2P	A6NHM9	499 aa		12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	ZEB2	O60315	1214 aa		12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	PQBP1	O60828	265 aa	Known RBP	12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	CAPN15	O75808	1086 aa		12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	SSB	P05455	408 aa	Known RBP eCLIP	12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	YWHAB	P31946	246 aa	Known RBP	12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	UBA7	P41226	1012 aa		12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	CACNB1	Q02641	598 aa	Predicted RBP	12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	ITGA7	Q13683	1181 aa		12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	MCM6	Q14566	821 aa		12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	E2F4	Q16254	413 aa		12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	BRDT	Q58F21	947 aa	Predicted RBP	12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	MARCH8	Q5T0T0	291 aa		12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	PLPPR4	Q7Z2D5	763 aa		12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	RASSF8	Q8NHQ8	419 aa		12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	ERMN	Q8TAM6	284 aa		12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	ATP6V0A1	Q93050	837 aa		12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	ZNF668	Q96K58	619 aa	Predicted RBP	12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	CEP89	Q96ST8	783 aa		12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	TSEN34	Q9BSV6	310 aa	Known RBP	12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	C11orf49	Q9H6J7	331 aa		12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	ZSWIM4	Q9H7M6	989 aa		12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	LMBRD1	Q9NUN5	540 aa		12.6	□□□□□ -0.39
CERS3-208	ENST00000560944	ZNF215	Q9UL58	517 aa	Predicted RBP	12.6	□□□□□ -0.39
CERS3-208	ENST00000560944		A0A0U1RQG5	324 aa	Predicted RBP	12.59	□□□□□ -0.39
CERS3-208	ENST00000560944	POLR2D	O15514	142 aa	Known RBP	12.59	□□□□□ -0.39
CERS3-208	ENST00000560944	TREH	O43280	583 aa		12.59	□□□□□ -0.39
CERS3-208	ENST00000560944	USO1	O60763	962 aa	Known RBP	12.59	□□□□□ -0.39
CERS3-208	ENST00000560944	CYP2C9	P11712	490 aa		12.59	□□□□□ -0.39
CERS3-208	ENST00000560944	CLCN3	P51790	818 aa		12.59	□□□□□ -0.39
CERS3-208	ENST00000560944	RTP1	P59025	263 aa		12.59	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms