RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 SMIM10L2AP0DMW4 78 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 SMIM10L2BP0DMW5 78 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 PTGS1P23219 599 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 PSMC6P62333 389 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 KRT85P78386 507 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 PPFIA1Q13136 1202 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 PLCB4Q15147 1175 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 TRIM60Q495X7 471 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 NME8Q8N427 588 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 RETREG2Q8NC44 543 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 KCNG4Q8TDN1 519 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 NACC1Q96RE7 527 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 PCYT2Q99447 389 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 HSD17B14Q9BPX1 270 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 RNPEPQ9H4A4 650 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 ANKEF1Q9NU02 776 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 BRCA2P51587 3418 aa13.51□□□□□ -0.25
RABGGTA-215ENST00000560207 ARID2Q68CP9 1835 aa13.5□□□□□ -0.25
RABGGTA-215ENST00000560207 WNT7AO00755 349 aa13.5□□□□□ -0.25
RABGGTA-215ENST00000560207 KIAA0355O15063 1070 aa13.5□□□□□ -0.25
RABGGTA-215ENST00000560207 GAS2O43903 313 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-215ENST00000560207 TMOD1P28289 359 aa13.5□□□□□ -0.25
RABGGTA-215ENST00000560207 TXLNAP40222 546 aa13.5□□□□□ -0.25
RABGGTA-215ENST00000560207 RBL2Q08999 1139 aa13.5□□□□□ -0.25
RABGGTA-215ENST00000560207 STK38Q15208 465 aa13.5□□□□□ -0.25
RABGGTA-215ENST00000560207 GRIK4Q16099 956 aa13.5□□□□□ -0.25
RABGGTA-215ENST00000560207 RPAINQ86UA6 219 aa13.5□□□□□ -0.25
RABGGTA-215ENST00000560207 EIF2AK1Q9BQI3 630 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-215ENST00000560207 LXNQ9BS40 222 aa13.5□□□□□ -0.25
RABGGTA-215ENST00000560207 SCAND2PQ9GZW5 306 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-215ENST00000560207 TMEM39AQ9NV64 488 aa13.5□□□□□ -0.25
RABGGTA-215ENST00000560207 SRPRBQ9Y5M8 271 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-215ENST00000560207 MBLAC1A4D2B0 266 aaPredicted RBP13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 SLITRK3O94933 977 aa13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 INSRRP14616 1297 aa13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 RFC2P35250 354 aa13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 DDIT3P35638 169 aa13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 RFC5P40937 340 aa13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 UBA7P41226 1012 aa13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 CHMP4BP1P59074 171 aa13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 ADAM17P78536 824 aa13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 PRKCEQ02156 737 aa13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 FAAP100Q0VG06 881 aa13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 NBR1Q14596 966 aa13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 SERINC5Q86VE9 423 aa13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 TRIM50Q86XT4 487 aa13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 KRI1Q8N9T8 703 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 ZNF579Q8NAF0 562 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 CALML4Q96GE6 196 aa13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 CCDC43Q96MW1 224 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 TUBE1Q9UJT0 475 aa13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 RBM19Q9Y4C8 960 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 PCDHA2Q9Y5H9 948 aa13.49□□□□□ -0.25
RABGGTA-215ENST00000560207 TANC1Q9C0D5 1861 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 SMIM35A0A1B0GVV1 85 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 VWA3AA6NCI4 1184 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 POTEMA6NI47 508 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 EML1O00423 815 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 SPTLC2O15270 562 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 B4GALT4O60513 344 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 TIMP1P01033 207 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 RAG1P15918 1043 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 MARK3P27448 753 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 YWHABP31946 246 aaKnown RBP13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 CCT6AP40227 531 aaKnown RBP13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 DNM2P50570 870 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 PTPAQ15257 358 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 GDF6Q6KF10 455 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 TPH2Q8IWU9 490 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 TMEM199Q8N511 208 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 LINC00301Q8NCQ3 95 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 LMBR1Q8WVP7 490 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 SLC7A3Q8WY07 619 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 GJA10Q969M2 543 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 CDK5RAP3Q96JB5 506 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 USP28Q96RU2 1077 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 LBHD1Q9BQE6 289 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 PYM1Q9BRP8 204 aaKnown RBP13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 SETD4Q9NVD3 440 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 CHMP5Q9NZZ3 219 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 CCDC39Q9UFE4 941 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 DBR1Q9UK59 544 aaKnown RBP13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 TBX21Q9UL17 535 aa13.48□□□□□ -0.25
RABGGTA-215ENST00000560207 DDX11L8A8MPP1 907 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 M0QZ92 97 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 ZNF862O60290 1169 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 PFKMP08237 780 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 TBC1D8BQ0IIM8 1120 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 CSPP1Q1MSJ5 1256 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 ODR4Q5SWX8 454 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 HYIQ5T013 277 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 IER5Q5VY09 327 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 MTHFD1LQ6UB35 978 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 CATSPER3Q86XQ3 398 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 C7orf61Q8IZ16 206 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 RPUSD2Q8IZ73 545 aaKnown RBP13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 BANK1Q8NDB2 785 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 SNX29Q8TEQ0 813 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 DYDC2Q96IM9 177 aa13.47□□□□□ -0.25
RABGGTA-215ENST00000560207 IPO9Q96P70 1041 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms