RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ASCC2Q9H1I8 757 aaPredicted RBP8.87□□□□□ -0.99
SPG11-213ENST00000558988 TNKS2Q9H2K2 1166 aa8.87□□□□□ -0.99
SPG11-213ENST00000558988 TMPRSS5Q9H3S3 457 aa8.87□□□□□ -0.99
SPG11-213ENST00000558988 ZBTB21Q9ULJ3 1066 aa8.87□□□□□ -0.99
SPG11-213ENST00000558988 DDX19BQ9UMR2 479 aa8.87□□□□□ -0.99
SPG11-213ENST00000558988 COL2A1P02458 1487 aaPredicted RBP8.87□□□□□ -0.99
SPG11-213ENST00000558988 MYH1P12882 1939 aa8.86□□□□□ -0.99
SPG11-213ENST00000558988 METTL12A8MUP2 240 aa8.86□□□□□ -0.99
SPG11-213ENST00000558988 POLR3DP05423 398 aaPredicted RBP8.86□□□□□ -0.99
SPG11-213ENST00000558988 ASNSP08243 561 aa8.86□□□□□ -0.99
SPG11-213ENST00000558988 SYN1P17600 705 aa8.86□□□□□ -0.99
SPG11-213ENST00000558988 PABPC4Q13310 644 aaKnown RBP eCLIP8.86□□□□□ -0.99
SPG11-213ENST00000558988 RAB3GAP1Q15042 981 aa8.86□□□□□ -0.99
SPG11-213ENST00000558988 OCLNQ16625 522 aa8.86□□□□□ -0.99
SPG11-213ENST00000558988 SLC9C2Q5TAH2 1124 aa8.86□□□□□ -0.99
SPG11-213ENST00000558988 FOXP4Q8IVH2 680 aaPredicted RBP8.86□□□□□ -0.99
SPG11-213ENST00000558988 DPF3Q92784 378 aa8.86□□□□□ -0.99
SPG11-213ENST00000558988 KIF1BPQ96EK5 621 aa8.86□□□□□ -0.99
SPG11-213ENST00000558988 PAGR1Q9BTK6 254 aa8.86□□□□□ -0.99
SPG11-213ENST00000558988 MKNK1Q9BUB5 465 aa8.86□□□□□ -0.99
SPG11-213ENST00000558988 BOLA2Q9H3K6 86 aa8.86□□□□□ -0.99
SPG11-213ENST00000558988 ZCCHC4Q9H5U6 513 aa8.86□□□□□ -0.99
SPG11-213ENST00000558988 SLC45A1Q9Y2W3 748 aa8.86□□□□□ -0.99
SPG11-213ENST00000558988 FOCADQ5VW36 1801 aa8.86□□□□□ -0.99
SPG11-213ENST00000558988 ETV2O00321 342 aaPredicted RBP8.85□□□□□ -0.99
SPG11-213ENST00000558988 MPHOSPH10O00566 681 aaKnown RBP8.85□□□□□ -0.99
SPG11-213ENST00000558988 SMARCA5O60264 1052 aaPredicted RBP8.85□□□□□ -0.99
SPG11-213ENST00000558988 PDE6AP16499 860 aa8.85□□□□□ -0.99
SPG11-213ENST00000558988 LINC00310P59036 64 aa8.85□□□□□ -0.99
SPG11-213ENST00000558988 ZNF423Q2M1K9 1284 aa8.85□□□□□ -0.99
SPG11-213ENST00000558988 WDR78Q5VTH9 848 aa8.85□□□□□ -0.99
SPG11-213ENST00000558988 CYFIP1Q7L576 1253 aa8.85□□□□□ -0.99
SPG11-213ENST00000558988 CCAR1Q8IX12 1150 aaKnown RBP8.85□□□□□ -0.99
SPG11-213ENST00000558988 SIRT2Q8IXJ6 389 aa8.85□□□□□ -0.99
SPG11-213ENST00000558988 ASB11Q8WXH4 323 aa8.85□□□□□ -0.99
SPG11-213ENST00000558988 SHISA4Q96DD7 197 aa8.85□□□□□ -0.99
SPG11-213ENST00000558988 IRF2BPLQ9H1B7 796 aa8.85□□□□□ -0.99
SPG11-213ENST00000558988 CWC22Q9HCG8 908 aaKnown RBP8.85□□□□□ -0.99
SPG11-213ENST00000558988 ZBTB40Q9NUA8 1239 aa8.85□□□□□ -0.99
SPG11-213ENST00000558988 MCM9Q9NXL9 1143 aa8.85□□□□□ -0.99
SPG11-213ENST00000558988 SNX11Q9Y5W9 270 aa8.85□□□□□ -0.99
SPG11-213ENST00000558988 LOC285556D6RIA3 1793 aa8.85□□□□□ -0.99
SPG11-213ENST00000558988 ZNF532Q9HCE3 1301 aa8.84□□□□□ -0.99
SPG11-213ENST00000558988 A6NHS1 94 aa8.84□□□□□ -0.99
SPG11-213ENST00000558988 TFRCP02786 760 aaKnown RBP8.84□□□□□ -0.99
SPG11-213ENST00000558988 CYP2D6P10635 497 aa8.84□□□□□ -0.99
SPG11-213ENST00000558988 BMP7P18075 431 aa8.84□□□□□ -0.99
SPG11-213ENST00000558988 GCLCP48506 637 aaPredicted RBP8.84□□□□□ -0.99
SPG11-213ENST00000558988 BACE1P56817 501 aa8.84□□□□□ -0.99
SPG11-213ENST00000558988 TTF1Q15361 905 aaPredicted RBP8.84□□□□□ -0.99
SPG11-213ENST00000558988 FAM110CQ1W6H9 321 aa8.84□□□□□ -0.99
SPG11-213ENST00000558988 CERKLQ49MI3 558 aaPredicted RBP8.84□□□□□ -0.99
SPG11-213ENST00000558988 TTC6Q86TZ1 520 aa8.84□□□□□ -0.99
SPG11-213ENST00000558988 ATCAYQ86WG3 371 aa8.84□□□□□ -0.99
SPG11-213ENST00000558988 RPAP2Q8IXW5 612 aaPredicted RBP8.84□□□□□ -0.99
SPG11-213ENST00000558988 DOCK3Q8IZD9 2030 aa8.84□□□□□ -0.99
SPG11-213ENST00000558988 LCORLQ8N3X6 602 aa8.84□□□□□ -0.99
SPG11-213ENST00000558988 SDR42E1Q8WUS8 393 aa8.84□□□□□ -0.99
SPG11-213ENST00000558988 DEFB118Q96PH6 123 aa8.84□□□□□ -0.99
SPG11-213ENST00000558988 P2RX7Q99572 595 aaKnown RBP8.84□□□□□ -0.99
SPG11-213ENST00000558988 WDR18Q9BV38 432 aa8.84□□□□□ -0.99
SPG11-213ENST00000558988 CRNKL1Q9BZJ0 848 aaKnown RBP8.84□□□□□ -0.99
SPG11-213ENST00000558988 ARMT1Q9H993 441 aa8.84□□□□□ -0.99
SPG11-213ENST00000558988 SERPINB13Q9UIV8 391 aa8.84□□□□□ -0.99
SPG11-213ENST00000558988 NAV1Q8NEY1 1877 aa8.83□□□□□ -1
SPG11-213ENST00000558988 H0YGN5 161 aa8.83□□□□□ -1
SPG11-213ENST00000558988 EREGO14944 169 aa8.83□□□□□ -1
SPG11-213ENST00000558988 RAB11FIP3O75154 756 aa8.83□□□□□ -1
SPG11-213ENST00000558988 MBD4O95243 580 aa8.83□□□□□ -1
SPG11-213ENST00000558988 GJB1P08034 283 aa8.83□□□□□ -1
SPG11-213ENST00000558988 CYP2B6P20813 491 aa8.83□□□□□ -1
SPG11-213ENST00000558988 PLCD1P51178 756 aa8.83□□□□□ -1
SPG11-213ENST00000558988 PCDH1Q08174 1060 aa8.83□□□□□ -1
SPG11-213ENST00000558988 ABCB5Q2M3G0 1257 aa8.83□□□□□ -1
SPG11-213ENST00000558988 SLC44A5Q8NCS7 719 aa8.83□□□□□ -1
SPG11-213ENST00000558988 U2AF1L4Q8WU68 220 aaKnown RBP8.83□□□□□ -1
SPG11-213ENST00000558988 CHMP4BQ9H444 224 aaKnown RBP8.83□□□□□ -1
SPG11-213ENST00000558988 ZFYVE1Q9HBF4 777 aa8.83□□□□□ -1
SPG11-213ENST00000558988 TXNRD2Q9NNW7 524 aa8.83□□□□□ -1
SPG11-213ENST00000558988 CABP5Q9NP86 173 aa8.83□□□□□ -1
SPG11-213ENST00000558988 DCP1AQ9NPI6 582 aaPredicted RBP8.83□□□□□ -1
SPG11-213ENST00000558988 PAG1Q9NWQ8 432 aa8.83□□□□□ -1
SPG11-213ENST00000558988 C19orf81C9J6K1 198 aa8.82□□□□□ -1
SPG11-213ENST00000558988 PRKAB2O43741 272 aa8.82□□□□□ -1
SPG11-213ENST00000558988 CHGBP05060 677 aa8.82□□□□□ -1
SPG11-213ENST00000558988 GJA8P48165 433 aa8.82□□□□□ -1
SPG11-213ENST00000558988 HERVK_113P62684 666 aa8.82□□□□□ -1
SPG11-213ENST00000558988 PDE3AQ14432 1141 aa8.82□□□□□ -1
SPG11-213ENST00000558988 SEPT2Q15019 361 aa8.82□□□□□ -1
SPG11-213ENST00000558988 TSHZ3Q63HK5 1081 aa8.82□□□□□ -1
SPG11-213ENST00000558988 CERS3Q8IU89 383 aa8.82□□□□□ -1
SPG11-213ENST00000558988 GPRC5AQ8NFJ5 357 aa8.82□□□□□ -1
SPG11-213ENST00000558988 ACER1Q8TDN7 264 aa8.82□□□□□ -1
SPG11-213ENST00000558988 GCC1Q96CN9 775 aa8.82□□□□□ -1
SPG11-213ENST00000558988 DYNLL2Q96FJ2 89 aa8.82□□□□□ -1
SPG11-213ENST00000558988 CORO1BQ9BR76 489 aa8.82□□□□□ -1
SPG11-213ENST00000558988 RIOK1Q9BRS2 568 aaKnown RBP8.82□□□□□ -1
SPG11-213ENST00000558988 DUSP23Q9BVJ7 150 aa8.82□□□□□ -1
SPG11-213ENST00000558988 LRRCC1Q9C099 1032 aa8.82□□□□□ -1
SPG11-213ENST00000558988 CYP2D7A0A087X1C5 515 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms