RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 MAFGO15525 162 aa17.54■□□□□ 0.4
CPNE6-208ENST00000558795 CDC45O75419 566 aa17.54■□□□□ 0.4
CPNE6-208ENST00000558795 SCG2P13521 617 aa17.54■□□□□ 0.4
CPNE6-208ENST00000558795 IBSPP21815 317 aaPredicted RBP17.54■□□□□ 0.4
CPNE6-208ENST00000558795 COASYQ13057 564 aa17.54■□□□□ 0.4
CPNE6-208ENST00000558795 PKN1Q16512 942 aa17.54■□□□□ 0.4
CPNE6-208ENST00000558795 TRIM67Q6ZTA4 783 aa17.54■□□□□ 0.4
CPNE6-208ENST00000558795 BMP8AQ7Z5Y6 402 aa17.54■□□□□ 0.4
CPNE6-208ENST00000558795 RTN4RL1Q86UN2 441 aaPredicted RBP17.54■□□□□ 0.4
CPNE6-208ENST00000558795 SUGP1Q8IWZ8 645 aaKnown RBP17.54■□□□□ 0.4
CPNE6-208ENST00000558795 SMRP1Q8NCR6 262 aa17.54■□□□□ 0.4
CPNE6-208ENST00000558795 JPH1Q9HDC5 661 aaPredicted RBP17.54■□□□□ 0.4
CPNE6-208ENST00000558795 JADE2Q9NQC1 790 aa17.54■□□□□ 0.4
CPNE6-208ENST00000558795 CLEC1BQ9P126 229 aa17.54■□□□□ 0.4
CPNE6-208ENST00000558795 PTPN5P54829 565 aa17.53■□□□□ 0.4
CPNE6-208ENST00000558795 UBE2SQ16763 222 aa17.53■□□□□ 0.4
CPNE6-208ENST00000558795 SPOUT1Q5T280 376 aaKnown RBP17.53■□□□□ 0.4
CPNE6-208ENST00000558795 NFXL1Q6ZNB6 911 aa17.53■□□□□ 0.4
CPNE6-208ENST00000558795 MB21D2Q8IYB1 491 aaPredicted RBP17.53■□□□□ 0.4
CPNE6-208ENST00000558795 CRIPAKQ8N1N5 446 aa17.53■□□□□ 0.4
CPNE6-208ENST00000558795 MICAL1Q8TDZ2 1067 aa17.53■□□□□ 0.4
CPNE6-208ENST00000558795 PRRX2Q99811 253 aa17.53■□□□□ 0.4
CPNE6-208ENST00000558795 LY9Q9HBG7 655 aa17.53■□□□□ 0.4
CPNE6-208ENST00000558795 SLC9A2Q9UBY0 812 aa17.53■□□□□ 0.4
CPNE6-208ENST00000558795 BARX2Q9UMQ3 279 aaPredicted RBP17.53■□□□□ 0.4
CPNE6-208ENST00000558795 PCDHA2Q9Y5H9 948 aa17.53■□□□□ 0.4
CPNE6-208ENST00000558795 PLXNA4Q9HCM2 1894 aa17.52■□□□□ 0.4
CPNE6-208ENST00000558795 IGSF9BQ9UPX0 1349 aa17.52■□□□□ 0.4
CPNE6-208ENST00000558795 LOC730098B7Z3J9 87 aa17.52■□□□□ 0.4
CPNE6-208ENST00000558795 PPFIA3O75145 1194 aa17.52■□□□□ 0.4
CPNE6-208ENST00000558795 PLEKHA8P1O95397 391 aa17.52■□□□□ 0.4
CPNE6-208ENST00000558795 SRBD1Q8N5C6 995 aaKnown RBP17.52■□□□□ 0.4
CPNE6-208ENST00000558795 TRAPPC12Q8WVT3 735 aa17.52■□□□□ 0.4
CPNE6-208ENST00000558795 PCYT2Q99447 389 aa17.52■□□□□ 0.4
CPNE6-208ENST00000558795 SDF4Q9BRK5 362 aa17.52■□□□□ 0.4
CPNE6-208ENST00000558795 CELF4Q9BZC1 486 aaKnown RBP17.52■□□□□ 0.4
CPNE6-208ENST00000558795 TLE6Q9H808 572 aa17.52■□□□□ 0.4
CPNE6-208ENST00000558795 PCDHA6Q9UN73 950 aa17.52■□□□□ 0.4
CPNE6-208ENST00000558795 USP15Q9Y4E8 981 aaPredicted RBP17.52■□□□□ 0.4
CPNE6-208ENST00000558795 PCDHB12Q9Y5F1 795 aa17.52■□□□□ 0.4
CPNE6-208ENST00000558795 PCDHA8Q9Y5H6 950 aa17.52■□□□□ 0.4
CPNE6-208ENST00000558795 C5orf42Q9H799 3197 aa17.52■□□□□ 0.39
CPNE6-208ENST00000558795 CCDC69A6NI79 296 aa17.51■□□□□ 0.39
CPNE6-208ENST00000558795 GLP2RO95838 553 aa17.51■□□□□ 0.39
CPNE6-208ENST00000558795 GATMP50440 423 aa17.51■□□□□ 0.39
CPNE6-208ENST00000558795 ZXDAP98168 799 aa17.51■□□□□ 0.39
CPNE6-208ENST00000558795 KRT76Q01546 638 aa17.51■□□□□ 0.39
CPNE6-208ENST00000558795 NFX1Q12986 1120 aaKnown RBP17.51■□□□□ 0.39
CPNE6-208ENST00000558795 PLCB4Q15147 1175 aa17.51■□□□□ 0.39
CPNE6-208ENST00000558795 CMTR1Q8N1G2 835 aaKnown RBP17.51■□□□□ 0.39
CPNE6-208ENST00000558795 TMTC2Q8N394 836 aa17.51■□□□□ 0.39
CPNE6-208ENST00000558795 PRSS33Q8NF86 280 aa17.51■□□□□ 0.39
CPNE6-208ENST00000558795 PHF7Q9BWX1 381 aaPredicted RBP17.51■□□□□ 0.39
CPNE6-208ENST00000558795 AAASQ9NRG9 546 aa17.51■□□□□ 0.39
CPNE6-208ENST00000558795 RNF216Q9NWF9 866 aaPredicted RBP17.51■□□□□ 0.39
CPNE6-208ENST00000558795 PCDHB7Q9Y5E2 793 aa17.51■□□□□ 0.39
CPNE6-208ENST00000558795 PCDHGC5Q9Y5F6 944 aa17.51■□□□□ 0.39
CPNE6-208ENST00000558795 SMIM35A0A1B0GVV1 85 aa17.5■□□□□ 0.39
CPNE6-208ENST00000558795 FSD2A1L4K1 749 aa17.5■□□□□ 0.39
CPNE6-208ENST00000558795 PRC1O43663 620 aa17.5■□□□□ 0.39
CPNE6-208ENST00000558795 CALM1P0DP23 149 aa17.5■□□□□ 0.39
CPNE6-208ENST00000558795 CALM2P0DP24 149 aa17.5■□□□□ 0.39
CPNE6-208ENST00000558795 CALM3P0DP25 149 aa17.5■□□□□ 0.39
CPNE6-208ENST00000558795 SARSP49591 514 aaKnown RBP17.5■□□□□ 0.39
CPNE6-208ENST00000558795 STAT5BP51692 787 aa17.5■□□□□ 0.39
CPNE6-208ENST00000558795 UBE3AQ05086 875 aa17.5■□□□□ 0.39
CPNE6-208ENST00000558795 TMEM266Q2M3C6 531 aa17.5■□□□□ 0.39
CPNE6-208ENST00000558795 PLPPR4Q7Z2D5 763 aa17.5■□□□□ 0.39
CPNE6-208ENST00000558795 HEATR3Q7Z4Q2 680 aa17.5■□□□□ 0.39
CPNE6-208ENST00000558795 NME8Q8N427 588 aa17.5■□□□□ 0.39
CPNE6-208ENST00000558795 RPGRIP1Q96KN7 1286 aa17.5■□□□□ 0.39
CPNE6-208ENST00000558795 PHOX2BQ99453 314 aa17.5■□□□□ 0.39
CPNE6-208ENST00000558795 MTA3Q9BTC8 594 aa17.5■□□□□ 0.39
CPNE6-208ENST00000558795 TLR9Q9NR96 1032 aa17.5■□□□□ 0.39
CPNE6-208ENST00000558795 KCNH7Q9NS40 1196 aa17.5■□□□□ 0.39
CPNE6-208ENST00000558795 GINS2Q9Y248 185 aa17.5■□□□□ 0.39
CPNE6-208ENST00000558795 KDM3AQ9Y4C1 1321 aa17.49■□□□□ 0.39
CPNE6-208ENST00000558795 hCG_1642624A0A1W2PR95 340 aa17.49■□□□□ 0.39
CPNE6-208ENST00000558795 PER2O15055 1255 aa17.49■□□□□ 0.39
CPNE6-208ENST00000558795 SGSM2O43147 1006 aa17.49■□□□□ 0.39
CPNE6-208ENST00000558795 RXRAP19793 462 aa17.49■□□□□ 0.39
CPNE6-208ENST00000558795 ACTR2P61160 394 aa17.49■□□□□ 0.39
CPNE6-208ENST00000558795 CBX2Q14781 532 aaPredicted RBP17.49■□□□□ 0.39
CPNE6-208ENST00000558795 IER5LQ5T953 404 aa17.49■□□□□ 0.39
CPNE6-208ENST00000558795 FBXL6Q8N531 539 aa17.49■□□□□ 0.39
CPNE6-208ENST00000558795 TMEM87BQ96K49 555 aa17.49■□□□□ 0.39
CPNE6-208ENST00000558795 MXRA8Q9BRK3 442 aa17.49■□□□□ 0.39
CPNE6-208ENST00000558795 TMX1Q9H3N1 280 aa17.49■□□□□ 0.39
CPNE6-208ENST00000558795 RBM8AQ9Y5S9 174 aaKnown RBP17.49■□□□□ 0.39
CPNE6-208ENST00000558795 NFASCO94856 1347 aa17.48■□□□□ 0.39
CPNE6-208ENST00000558795 FNDC1Q4ZHG4 1894 aaPredicted RBP17.48■□□□□ 0.39
CPNE6-208ENST00000558795 DENND3A2RUS2 1198 aa17.48■□□□□ 0.39
CPNE6-208ENST00000558795 TBKBP1A7MCY6 615 aa17.48■□□□□ 0.39
CPNE6-208ENST00000558795 SH2B2O14492 632 aaPredicted RBP17.48■□□□□ 0.39
CPNE6-208ENST00000558795 EIF5BO60841 1220 aaKnown RBP17.48■□□□□ 0.39
CPNE6-208ENST00000558795 RPS6KA5O75582 802 aa17.48■□□□□ 0.39
CPNE6-208ENST00000558795 SRGAP2BP0DMP2 458 aa17.48■□□□□ 0.39
CPNE6-208ENST00000558795 MCM5P33992 734 aa17.48■□□□□ 0.39
CPNE6-208ENST00000558795 SIGLEC14Q08ET2 396 aa17.48■□□□□ 0.39
CPNE6-208ENST00000558795 ODR4Q5SWX8 454 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms