RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 RRAGBQ5VZM2 374 aa10.76□□□□□ -0.69
CUX1-216ENST00000558469 PDXDC2PQ6P474 469 aa10.76□□□□□ -0.69
CUX1-216ENST00000558469 POTEGQ6S5H5 508 aa10.76□□□□□ -0.69
CUX1-216ENST00000558469 CCDC73Q6ZRK6 1079 aa10.76□□□□□ -0.69
CUX1-216ENST00000558469 TRMT1LQ7Z2T5 733 aaKnown RBP10.76□□□□□ -0.69
CUX1-216ENST00000558469 CKAP2LQ8IYA6 745 aa10.76□□□□□ -0.69
CUX1-216ENST00000558469 NEK9Q8TD19 979 aa10.76□□□□□ -0.69
CUX1-216ENST00000558469 ATP6V0A1Q93050 837 aa10.76□□□□□ -0.69
CUX1-216ENST00000558469 ZNF333Q96JL9 665 aa10.76□□□□□ -0.69
CUX1-216ENST00000558469 PNMA5Q96PV4 448 aa10.76□□□□□ -0.69
CUX1-216ENST00000558469 PCYT2Q99447 389 aa10.76□□□□□ -0.69
CUX1-216ENST00000558469 MCOLN1Q9GZU1 580 aa10.76□□□□□ -0.69
CUX1-216ENST00000558469 NT5C3AQ9H0P0 336 aa10.76□□□□□ -0.69
CUX1-216ENST00000558469 SMARCAD1Q9H4L7 1026 aa10.76□□□□□ -0.69
CUX1-216ENST00000558469 ZSWIM4Q9H7M6 989 aa10.76□□□□□ -0.69
CUX1-216ENST00000558469 PAK6Q9NQU5 681 aaPredicted RBP10.76□□□□□ -0.69
CUX1-216ENST00000558469 DDX19AQ9NUU7 478 aaKnown RBP10.76□□□□□ -0.69
CUX1-216ENST00000558469 WRAP73Q9P2S5 460 aaPredicted RBP10.76□□□□□ -0.69
CUX1-216ENST00000558469 TRPC6Q9Y210 931 aa10.76□□□□□ -0.69
CUX1-216ENST00000558469 HPSEQ9Y251 543 aa10.76□□□□□ -0.69
CUX1-216ENST00000558469 FAM237AA0A1B0GTK4 181 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 ZBTB39O15060 712 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 SLC26A4O43511 780 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 ZEB2O60315 1214 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 DKC1O60832 514 aaKnown RBP eCLIP10.75□□□□□ -0.692e-7■■■■■ 42.6
CUX1-216ENST00000558469 ADAMTS4O75173 837 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 NR1I2O75469 434 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 HOXD8P13378 290 aaPredicted RBP10.75□□□□□ -0.69
CUX1-216ENST00000558469 LIG1P18858 919 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 PLCG1P19174 1290 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 MUTP22033 750 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 STAT6P42226 847 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 SYKP43405 635 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 PSMC6P62333 389 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 PRKCEQ02156 737 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 FAM160A1Q05DH4 1040 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 LRRC41Q15345 812 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 NFKBIBQ15653 356 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 HYIQ5T013 277 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 PLPPR4Q7Z2D5 763 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 RNF180Q86T96 592 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 TRIM50Q86XT4 487 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 AFAP1L1Q8TED9 768 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 PIGOQ8TEQ8 1089 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 DHX58Q96C10 678 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 ARMC5Q96C12 935 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 DEFB118Q96PH6 123 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 C16orf70Q9BSU1 422 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 MAFBQ9Y5Q3 323 aaPredicted RBP10.75□□□□□ -0.69
CUX1-216ENST00000558469 EMSYQ7Z589 1322 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 IGSF9BQ9UPX0 1349 aa10.75□□□□□ -0.69
CUX1-216ENST00000558469 SCN10AQ9Y5Y9 1956 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 E9PMD0 336 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 H3BRB1 525 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 ATMINO43313 823 aaPredicted RBP10.74□□□□□ -0.69
CUX1-216ENST00000558469 ZNF862O60290 1169 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 KPNA6O60684 536 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 ZNF202O95125 648 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 ASGR1P07306 291 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 ATP4AP20648 1035 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 PTMSP20962 102 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 MARK3P27448 753 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 CHMP4BP1P59074 171 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 NKX3-2P78367 333 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 SNW1Q13573 536 aaKnown RBP10.74□□□□□ -0.69
CUX1-216ENST00000558469 KCNA10Q16322 511 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 TMEM119Q4V9L6 283 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 KCNK18Q7Z418 384 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 C4orf19Q8IY42 314 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 FMR1NBQ8N0W7 255 aaPredicted RBP10.74□□□□□ -0.69
CUX1-216ENST00000558469 IQUBQ8NA54 791 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 PCSK9Q8NBP7 692 aaKnown RBP10.74□□□□□ -0.69
CUX1-216ENST00000558469 ARRDC4Q8NCT1 418 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 KLHDC9Q8NEP7 349 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 ENGASEQ8NFI3 743 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 GPT2Q8TD30 523 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 NACC1Q96RE7 527 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 TUT1Q9H6E5 874 aaKnown RBP10.74□□□□□ -0.69
CUX1-216ENST00000558469 ERAP1Q9NZ08 941 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 ZNF215Q9UL58 517 aaPredicted RBP10.74□□□□□ -0.69
CUX1-216ENST00000558469 DNM3Q9UQ16 869 aa10.74□□□□□ -0.69
CUX1-216ENST00000558469 TMEM150BA6NC51 233 aa10.73□□□□□ -0.69
CUX1-216ENST00000558469 STBD1O95210 358 aa10.73□□□□□ -0.69
CUX1-216ENST00000558469 LYPLA2O95372 231 aa10.73□□□□□ -0.69
CUX1-216ENST00000558469 TFRCP02786 760 aaKnown RBP10.73□□□□□ -0.69
CUX1-216ENST00000558469 OATP04181 439 aa10.73□□□□□ -0.69
CUX1-216ENST00000558469 CST5P28325 142 aaPredicted RBP10.73□□□□□ -0.69
CUX1-216ENST00000558469 YWHABP31946 246 aaKnown RBP10.73□□□□□ -0.69
CUX1-216ENST00000558469 SLC26A2P50443 739 aa10.73□□□□□ -0.69
CUX1-216ENST00000558469 PURAQ00577 322 aaKnown RBP10.73□□□□□ -0.69
CUX1-216ENST00000558469 DHX8Q14562 1220 aaKnown RBP10.73□□□□□ -0.69
CUX1-216ENST00000558469 MFSD10Q14728 455 aa10.73□□□□□ -0.69
CUX1-216ENST00000558469 PLCB4Q15147 1175 aa10.73□□□□□ -0.69
CUX1-216ENST00000558469 E2F4Q16254 413 aa10.73□□□□□ -0.69
CUX1-216ENST00000558469 LONRF3Q496Y0 759 aa10.73□□□□□ -0.69
CUX1-216ENST00000558469 NAALADL2Q58DX5 795 aa10.73□□□□□ -0.69
CUX1-216ENST00000558469 XKR3Q5GH77 459 aa10.73□□□□□ -0.69
CUX1-216ENST00000558469 ASTLQ6HA08 431 aaPredicted RBP10.73□□□□□ -0.69
CUX1-216ENST00000558469 CCSAPQ6IQ19 270 aaPredicted RBP10.73□□□□□ -0.69
CUX1-216ENST00000558469 CXCL17Q6UXB2 119 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms