RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 SLFN12Q8IYM2 578 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 NME8Q8N427 588 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 ZNF579Q8NAF0 562 aaKnown RBP9.58□□□□□ -0.88
TPM1-213ENST00000558400 FBXO18Q8NFZ0 1043 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 PPP1R13LQ8WUF5 828 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 SCLYQ96I15 445 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 CTAGE1Q96RT6 745 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 PCYT2Q99447 389 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 FTOQ9C0B1 505 aaKnown RBP eCLIP9.58□□□□□ -0.88
TPM1-213ENST00000558400 WNT8AQ9H1J5 351 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 DISC1Q9NRI5 854 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 NRBP2Q9NSY0 501 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 TRPC6Q9Y210 931 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 MAFBQ9Y5Q3 323 aaPredicted RBP9.58□□□□□ -0.88
TPM1-213ENST00000558400 LAMA2P24043 3122 aaKnown RBP9.58□□□□□ -0.88
TPM1-213ENST00000558400 UMODL1Q5DID0 1318 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 MBLAC1A4D2B0 266 aaPredicted RBP9.57□□□□□ -0.88
TPM1-213ENST00000558400 BTBD18B2RXH4 712 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 CCNT1O60563 726 aaKnown RBP9.57□□□□□ -0.88
TPM1-213ENST00000558400 DKC1O60832 514 aaKnown RBP eCLIP9.57□□□□□ -0.88
TPM1-213ENST00000558400 EFCAB14O75071 495 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 PSMD10O75832 226 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 BAIAP3O94812 1187 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 MARK3P27448 753 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 PLCB4Q15147 1175 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 TRIM71Q2Q1W2 868 aaKnown RBP9.57□□□□□ -0.88
TPM1-213ENST00000558400 ZNF484Q5JVG2 852 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 RASIP1Q5U651 963 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 OTOP2Q7RTS6 562 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 DEFB128Q7Z7B8 93 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 CKAP2LQ8IYA6 745 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 DIS3L2Q8IYB7 885 aaKnown RBP9.57□□□□□ -0.88
TPM1-213ENST00000558400 ZNF710Q8N1W2 664 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 PHOSPHO2Q8TCD6 241 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 OXER1Q8TDS5 423 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 ATP8B4Q8TF62 1192 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 LMBR1Q8WVP7 490 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 BBXQ8WY36 941 aaPredicted RBP9.57□□□□□ -0.88
TPM1-213ENST00000558400 DHX38Q92620 1227 aaKnown RBP9.57□□□□□ -0.88
TPM1-213ENST00000558400 TMX3Q96JJ7 454 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 FAM167AQ96KS9 214 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 FOXP1Q9H334 677 aaPredicted RBP9.57□□□□□ -0.88
TPM1-213ENST00000558400 GJB4Q9NTQ9 266 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 TUBE1Q9UJT0 475 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 CEP131Q9UPN4 1083 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 TELO2Q9Y4R8 837 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.57□□□□□ -0.88
TPM1-213ENST00000558400 SLC4A7Q9Y6M7 1214 aa9.57□□□□□ -0.88
TPM1-213ENST00000558400 COL1A2P08123 1366 aa9.56□□□□□ -0.88
TPM1-213ENST00000558400 ABHD14A-ACY1A0A1B0GW23 586 aa9.56□□□□□ -0.88
TPM1-213ENST00000558400 MAGEB2O15479 319 aa9.56□□□□□ -0.88
TPM1-213ENST00000558400 TDP2O95551 362 aa9.56□□□□□ -0.88
TPM1-213ENST00000558400 CXCL10P02778 98 aa9.56□□□□□ -0.88
TPM1-213ENST00000558400 ST3GAL1Q11201 340 aa9.56□□□□□ -0.88
TPM1-213ENST00000558400 NR5A1Q13285 461 aa9.56□□□□□ -0.88
TPM1-213ENST00000558400 GNL2Q13823 731 aaKnown RBP9.56□□□□□ -0.88
TPM1-213ENST00000558400 IKBKEQ14164 716 aa9.56□□□□□ -0.88
TPM1-213ENST00000558400 HIC1Q14526 733 aa9.56□□□□□ -0.88
TPM1-213ENST00000558400 FAM26DQ5JW98 314 aa9.56□□□□□ -0.88
TPM1-213ENST00000558400 ZNF618Q5T7W0 954 aa9.56□□□□□ -0.88
TPM1-213ENST00000558400 IER5Q5VY09 327 aa9.56□□□□□ -0.88
TPM1-213ENST00000558400 MIER3Q7Z3K6 550 aa9.56□□□□□ -0.88
TPM1-213ENST00000558400 ETNPPLQ8TBG4 499 aa9.56□□□□□ -0.88
TPM1-213ENST00000558400 TNFRSF25Q93038 417 aa9.56□□□□□ -0.88
TPM1-213ENST00000558400 KCNMB3Q9NPA1 279 aa9.56□□□□□ -0.88
TPM1-213ENST00000558400 PCDHA2Q9Y5H9 948 aa9.56□□□□□ -0.88
TPM1-213ENST00000558400 SQORQ9Y6N5 450 aa9.56□□□□□ -0.88
TPM1-213ENST00000558400 SMIM35A0A1B0GVV1 85 aa9.55□□□□□ -0.88
TPM1-213ENST00000558400 KIF28PB7ZC32 967 aa9.55□□□□□ -0.88
TPM1-213ENST00000558400 M0QZ92 97 aa9.55□□□□□ -0.88
TPM1-213ENST00000558400 KLRC1P26715 233 aa9.55□□□□□ -0.88
TPM1-213ENST00000558400 TMOD1P28289 359 aa9.55□□□□□ -0.88
TPM1-213ENST00000558400 TRAPPC10P48553 1259 aa9.55□□□□□ -0.88
TPM1-213ENST00000558400 CDC42EP1Q00587 391 aa9.55□□□□□ -0.88
TPM1-213ENST00000558400 PPP2R5CQ13362 524 aa9.55□□□□□ -0.88
TPM1-213ENST00000558400 ORC2Q13416 577 aaPredicted RBP9.55□□□□□ -0.88
TPM1-213ENST00000558400 RAB30Q15771 203 aa9.55□□□□□ -0.88
TPM1-213ENST00000558400 MARCH8Q5T0T0 291 aa9.55□□□□□ -0.88
TPM1-213ENST00000558400 CNKSR3Q6P9H4 555 aa9.55□□□□□ -0.88
TPM1-213ENST00000558400 B3GNT9Q6UX72 402 aa9.55□□□□□ -0.88
TPM1-213ENST00000558400 CCDC60Q8IWA6 550 aaPredicted RBP9.55□□□□□ -0.88
TPM1-213ENST00000558400 EXOC8Q8IYI6 725 aa9.55□□□□□ -0.88
TPM1-213ENST00000558400 USP38Q8NB14 1042 aa9.55□□□□□ -0.88
TPM1-213ENST00000558400 MYLIPQ8WY64 445 aa9.55□□□□□ -0.88
TPM1-213ENST00000558400 GABBR1Q9UBS5 961 aa9.55□□□□□ -0.88
TPM1-213ENST00000558400 MSRAQ9UJ68 235 aa9.55□□□□□ -0.88
TPM1-213ENST00000558400 PCDHA12Q9UN75 941 aa9.55□□□□□ -0.88
TPM1-213ENST00000558400 ZBBXA8MT70 800 aa9.54□□□□□ -0.88
TPM1-213ENST00000558400 NBNO60934 754 aa9.54□□□□□ -0.88
TPM1-213ENST00000558400 DTNBO60941 627 aa9.54□□□□□ -0.88
TPM1-213ENST00000558400 P4HBP07237 508 aaKnown RBP9.54□□□□□ -0.88
TPM1-213ENST00000558400 FOSL2P15408 326 aa9.54□□□□□ -0.88
TPM1-213ENST00000558400 ATP2A2P16615 1042 aaKnown RBP9.54□□□□□ -0.88
TPM1-213ENST00000558400 KCNJ6P48051 423 aa9.54□□□□□ -0.88
TPM1-213ENST00000558400 PSMC5P62195 406 aa9.54□□□□□ -0.88
TPM1-213ENST00000558400 IGBP1P78318 339 aa9.54□□□□□ -0.88
TPM1-213ENST00000558400 GPNMBQ14956 572 aa9.54□□□□□ -0.88
TPM1-213ENST00000558400 EPHA7Q15375 998 aa9.54□□□□□ -0.88
TPM1-213ENST00000558400 XKR3Q5GH77 459 aa9.54□□□□□ -0.88
TPM1-213ENST00000558400 ODR4Q5SWX8 454 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms