RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 LENG1Q96BZ8 264 aaPredicted RBP13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 DOCK5Q9H7D0 1870 aa13.61□□□□□ -0.23
HMGB1P8-201ENST00000558211 SEPT4O43236 478 aa13.61□□□□□ -0.23
HMGB1P8-201ENST00000558211 ARIH2O95376 493 aa13.61□□□□□ -0.23
HMGB1P8-201ENST00000558211 ZSCAN22P10073 491 aaPredicted RBP13.61□□□□□ -0.23
HMGB1P8-201ENST00000558211 AKR1A1P14550 325 aa13.61□□□□□ -0.23
HMGB1P8-201ENST00000558211 MCM7P33993 719 aa13.61□□□□□ -0.23
HMGB1P8-201ENST00000558211 RESTQ13127 1097 aa13.61□□□□□ -0.23
HMGB1P8-201ENST00000558211 SEMA3FQ13275 785 aa13.61□□□□□ -0.23
HMGB1P8-201ENST00000558211 PPP1R26Q5T8A7 1209 aaPredicted RBP13.61□□□□□ -0.23
HMGB1P8-201ENST00000558211 IQSEC1Q6DN90 963 aa13.61□□□□□ -0.23
HMGB1P8-201ENST00000558211 FAM173BQ6P4H8 233 aa13.61□□□□□ -0.23
HMGB1P8-201ENST00000558211 ARMC5Q96C12 935 aa13.61□□□□□ -0.23
HMGB1P8-201ENST00000558211 ZNF333Q96JL9 665 aa13.61□□□□□ -0.23
HMGB1P8-201ENST00000558211 IPO9Q96P70 1041 aaKnown RBP13.61□□□□□ -0.23
HMGB1P8-201ENST00000558211 INPP4AQ96PE3 977 aaPredicted RBP13.61□□□□□ -0.23
HMGB1P8-201ENST00000558211 DDX25Q9UHL0 483 aaKnown RBP13.61□□□□□ -0.23
HMGB1P8-201ENST00000558211 NRBP1Q9UHY1 535 aa13.61□□□□□ -0.23
HMGB1P8-201ENST00000558211 IGLV3-22A0A075B6J6 115 aa13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 RBM47A0AV96 593 aaKnown RBP13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 SPATA31C2B4DYI2 1134 aa13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 MEIS1O00470 390 aa13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 DYNC1LI2O43237 492 aaPredicted RBP13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 ADCY6O43306 1168 aa13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 FIBPO43427 364 aa13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 SLC37A4O43826 429 aa13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 MARCH6O60337 910 aa13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 ATP9AO75110 1047 aa13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 CIITAP33076 1130 aa13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 SP2Q02086 613 aa13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 DHX9Q08211 1270 aaKnown RBP13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 TTC38Q5R3I4 469 aa13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 BRAPQ7Z569 592 aa13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 GJA10Q969M2 543 aa13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 GPRASP2Q96D09 838 aa13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 DEFB118Q96PH6 123 aa13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 BCAS3Q9H6U6 928 aa13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 AAASQ9NRG9 546 aa13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 KCNH7Q9NS40 1196 aa13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 DDX20Q9UHI6 824 aaKnown RBP13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 DDX41Q9UJV9 622 aaKnown RBP13.6□□□□□ -0.23
HMGB1P8-201ENST00000558211 ERVH48-1M5A8F1 160 aa13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 DDX39AO00148 427 aaKnown RBP13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 GGPS1O95749 300 aa13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 F13A1P00488 732 aa13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 RARBP10826 455 aa13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 PDIA4P13667 645 aaKnown RBP13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 ICAM3P32942 547 aa13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 TOB1P50616 345 aaPredicted RBP13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 WDR4P57081 412 aaKnown RBP13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 SP4Q02446 784 aa13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 DUSP28Q4G0W2 176 aa13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 CCDC62Q6P9F0 684 aa13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 KCNV1Q6PIU1 500 aa13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 NIPA1Q7RTP0 329 aa13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 DHX37Q8IY37 1157 aaKnown RBP13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 OR6J1Q8NGC5 347 aa13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 GLMNQ92990 594 aa13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 ITPKCQ96DU7 683 aa13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 CDHR1Q96JP9 859 aa13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 NAP1L4Q99733 375 aaKnown RBP13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 ZNF577Q9BSK1 485 aa13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 ZSCAN16Q9H4T2 348 aaPredicted RBP13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 MLXIPQ9HAP2 919 aa13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 AGO4Q9HCK5 861 aaKnown RBP13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 PCDHB6Q9Y5E3 794 aa13.59□□□□□ -0.23
HMGB1P8-201ENST00000558211 CYP3A7-CYP3A51PA0A087WV96 503 aa13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 MSH4O15457 936 aa13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 MAFGO15525 162 aa13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 PGK1P00558 417 aa13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 TGFB3P10600 412 aa13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 GCFC2P16383 781 aaKnown RBP13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 UBA1P22314 1058 aaKnown RBP13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 CYP3A7P24462 503 aa13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 SETQ01105 290 aaPredicted RBP13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 CEBPZQ03701 1054 aaKnown RBP13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 Q4G0T1 1027 aa13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 RILPL1Q5EBL4 403 aa13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 PPP4R3AQ6IN85 833 aa13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 MOXD1Q6UVY6 613 aa13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 CYFIP1Q7L576 1253 aa13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 TLK2Q86UE8 772 aa13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 LENG9Q96B70 501 aa13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 CALR3Q96L12 384 aaKnown RBP13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 AP5M1Q9H0R1 490 aa13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 XPNPEP3Q9NQH7 507 aa13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 ZDHHC9Q9Y397 364 aa13.58□□□□□ -0.24
HMGB1P8-201ENST00000558211 IPO5O00410 1097 aaKnown RBP13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 NKRFO15226 690 aaKnown RBP eCLIP13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 NEMFO60524 1076 aa13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 MSCO60682 206 aa13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 DUSP11O75319 330 aaKnown RBP13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 BRD1O95696 1058 aa13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 GH1P01241 217 aa13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 TFRCP02786 760 aaKnown RBP13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 C6orf222P0C671 652 aaPredicted RBP13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 KCNA2P16389 499 aa13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 TRAPPC10P48553 1259 aa13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 NUCB2P80303 420 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms