RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 ATP8B4Q8TF62 1192 aa23.82■■□□□ 1.4
CASC4-204ENST00000557945 FAM167AQ96KS9 214 aa23.82■■□□□ 1.4
CASC4-204ENST00000557945 NRBP2Q9NSY0 501 aa23.82■■□□□ 1.4
CASC4-204ENST00000557945 WRAP73Q9P2S5 460 aaPredicted RBP23.82■■□□□ 1.4
CASC4-204ENST00000557945 PCDHA7Q9UN72 937 aa23.82■■□□□ 1.4
CASC4-204ENST00000557945 SCN10AQ9Y5Y9 1956 aa23.81■■□□□ 1.4
CASC4-204ENST00000557945 DDX11L8A8MPP1 907 aa23.81■■□□□ 1.4
CASC4-204ENST00000557945 ARVCFO00192 962 aa23.81■■□□□ 1.4
CASC4-204ENST00000557945 SMIM10L2AP0DMW4 78 aa23.81■■□□□ 1.4
CASC4-204ENST00000557945 SMIM10L2BP0DMW5 78 aa23.81■■□□□ 1.4
CASC4-204ENST00000557945 NFRKBQ6P4R8 1299 aa23.81■■□□□ 1.4
CASC4-204ENST00000557945 CABP7Q86V35 215 aa23.81■■□□□ 1.4
CASC4-204ENST00000557945 RASSF8Q8NHQ8 419 aa23.81■■□□□ 1.4
CASC4-204ENST00000557945 MMTAG2Q9BU76 263 aaKnown RBP23.81■■□□□ 1.4
CASC4-204ENST00000557945 HDAC6Q9UBN7 1215 aa23.81■■□□□ 1.4
CASC4-204ENST00000557945 TCHHQ07283 1943 aa23.81■■□□□ 1.4
CASC4-204ENST00000557945 HBP1O60381 514 aa23.8■■□□□ 1.4
CASC4-204ENST00000557945 PPFIA1Q13136 1202 aa23.8■■□□□ 1.4
CASC4-204ENST00000557945 XKR3Q5GH77 459 aa23.8■■□□□ 1.4
CASC4-204ENST00000557945 POTEGQ6S5H5 508 aa23.8■■□□□ 1.4
CASC4-204ENST00000557945 C4orf19Q8IY42 314 aa23.8■■□□□ 1.4
CASC4-204ENST00000557945 BBXQ8WY36 941 aaPredicted RBP23.8■■□□□ 1.4
CASC4-204ENST00000557945 SYMPKQ92797 1274 aaKnown RBP23.8■■□□□ 1.4
CASC4-204ENST00000557945 EPSTI1Q96J88 318 aa23.8■■□□□ 1.4
CASC4-204ENST00000557945 CDK5RAP3Q96JB5 506 aa23.8■■□□□ 1.4
CASC4-204ENST00000557945 SEPT9Q9UHD8 586 aaPredicted RBP23.8■■□□□ 1.4
CASC4-204ENST00000557945 MYH9P35579 1960 aaKnown RBP23.8■■□□□ 1.4
CASC4-204ENST00000557945 A0A087WWV3 80 aa23.79■■□□□ 1.4
CASC4-204ENST00000557945 TXLNAP40222 546 aa23.79■■□□□ 1.4
CASC4-204ENST00000557945 IGBP1P78318 339 aa23.79■■□□□ 1.4
CASC4-204ENST00000557945 TPRNQ4KMQ1 711 aa23.79■■□□□ 1.4
CASC4-204ENST00000557945 USP49Q70CQ1 688 aa23.79■■□□□ 1.4
CASC4-204ENST00000557945 ZNF579Q8NAF0 562 aaKnown RBP23.79■■□□□ 1.4
CASC4-204ENST00000557945 PLIN2Q99541 437 aa23.79■■□□□ 1.4
CASC4-204ENST00000557945 SEZ6LQ9BYH1 1024 aa23.79■■□□□ 1.4
CASC4-204ENST00000557945 SETD4Q9NVD3 440 aa23.79■■□□□ 1.4
CASC4-204ENST00000557945 KIAA1024Q9UPX6 916 aa23.79■■□□□ 1.4
CASC4-204ENST00000557945 C17orf102A2RUQ5 167 aa23.78■■□□□ 1.4
CASC4-204ENST00000557945 INSRRP14616 1297 aa23.78■■□□□ 1.4
CASC4-204ENST00000557945 YWHABP31946 246 aaKnown RBP23.78■■□□□ 1.4
CASC4-204ENST00000557945 GRIK4Q16099 956 aa23.78■■□□□ 1.4
CASC4-204ENST00000557945 ECM1Q16610 540 aa23.78■■□□□ 1.4
CASC4-204ENST00000557945 AXDND1Q5T1B0 1012 aaPredicted RBP23.78■■□□□ 1.4
CASC4-204ENST00000557945 SLC43A3Q8NBI5 491 aa23.78■■□□□ 1.4
CASC4-204ENST00000557945 CALML4Q96GE6 196 aa23.78■■□□□ 1.4
CASC4-204ENST00000557945 KDM3AQ9Y4C1 1321 aa23.78■■□□□ 1.4
CASC4-204ENST00000557945 TMEM150BA6NC51 233 aa23.78■■□□□ 1.4
CASC4-204ENST00000557945 PQBP1O60828 265 aaKnown RBP23.78■■□□□ 1.4
CASC4-204ENST00000557945 STBD1O95210 358 aa23.78■■□□□ 1.4
CASC4-204ENST00000557945 LYPLA2O95372 231 aa23.78■■□□□ 1.4
CASC4-204ENST00000557945 PTPN11Q06124 597 aaPredicted RBP23.78■■□□□ 1.4
CASC4-204ENST00000557945 LRRC26Q2I0M4 334 aa23.78■■□□□ 1.4
CASC4-204ENST00000557945 TRIM60Q495X7 471 aa23.78■■□□□ 1.4
CASC4-204ENST00000557945 PLA2G4FQ68DD2 849 aa23.78■■□□□ 1.4
CASC4-204ENST00000557945 OTUD6AQ7L8S5 288 aa23.78■■□□□ 1.4
CASC4-204ENST00000557945 SESTD1Q86VW0 696 aa23.78■■□□□ 1.4
CASC4-204ENST00000557945 PIGOQ8TEQ8 1089 aa23.78■■□□□ 1.4
CASC4-204ENST00000557945 CCDC43Q96MW1 224 aaKnown RBP23.78■■□□□ 1.4
CASC4-204ENST00000557945 NACC1Q96RE7 527 aa23.78■■□□□ 1.4
CASC4-204ENST00000557945 CCSER1Q9C0I3 900 aa23.78■■□□□ 1.4
CASC4-204ENST00000557945 DDX19AQ9NUU7 478 aaKnown RBP23.78■■□□□ 1.4
CASC4-204ENST00000557945 GTF2IRD1Q9UHL9 959 aa23.78■■□□□ 1.4
CASC4-204ENST00000557945 ATP11BQ9Y2G3 1177 aa23.78■■□□□ 1.4
CASC4-204ENST00000557945 NRCAMQ92823 1304 aa23.77■■□□□ 1.4
CASC4-204ENST00000557945 WDR81Q562E7 1941 aa23.77■■□□□ 1.4
CASC4-204ENST00000557945 RRN3P2A6NIE6 340 aa23.77■■□□□ 1.4
CASC4-204ENST00000557945 ZBTB39O15060 712 aa23.77■■□□□ 1.4
CASC4-204ENST00000557945 CAPN15O75808 1086 aa23.77■■□□□ 1.4
CASC4-204ENST00000557945 GNAT1P11488 350 aa23.77■■□□□ 1.4
CASC4-204ENST00000557945 MUTP22033 750 aa23.77■■□□□ 1.4
CASC4-204ENST00000557945 CDK7P50613 346 aa23.77■■□□□ 1.4
CASC4-204ENST00000557945 RTP1P59025 263 aa23.77■■□□□ 1.4
CASC4-204ENST00000557945 KARSQ15046 597 aaKnown RBP23.77■■□□□ 1.4
CASC4-204ENST00000557945 CSPP1Q1MSJ5 1256 aa23.77■■□□□ 1.4
CASC4-204ENST00000557945 MTERF2Q49AM1 385 aa23.77■■□□□ 1.4
CASC4-204ENST00000557945 ZNF484Q5JVG2 852 aa23.77■■□□□ 1.4
CASC4-204ENST00000557945 GDF6Q6KF10 455 aaPredicted RBP23.77■■□□□ 1.4
CASC4-204ENST00000557945 SHC4Q6S5L8 630 aa23.77■■□□□ 1.4
CASC4-204ENST00000557945 ANO5Q75V66 913 aa23.77■■□□□ 1.4
CASC4-204ENST00000557945 LMBR1Q8WVP7 490 aa23.77■■□□□ 1.4
CASC4-204ENST00000557945 TRAPPC12Q8WVT3 735 aa23.77■■□□□ 1.4
CASC4-204ENST00000557945 PNMA5Q96PV4 448 aa23.77■■□□□ 1.4
CASC4-204ENST00000557945 SH2D3AQ9BRG2 576 aa23.77■■□□□ 1.4
CASC4-204ENST00000557945 MROH7Q68CQ1 1323 aa23.76■■□□□ 1.39
CASC4-204ENST00000557945 SLC26A4O43511 780 aa23.76■■□□□ 1.39
CASC4-204ENST00000557945 ZNF200P98182 395 aaPredicted RBP23.76■■□□□ 1.39
CASC4-204ENST00000557945 GRB10Q13322 594 aa23.76■■□□□ 1.39
CASC4-204ENST00000557945 HIC1Q14526 733 aa23.76■■□□□ 1.39
CASC4-204ENST00000557945 SNX17Q15036 470 aa23.76■■□□□ 1.39
CASC4-204ENST00000557945 C1orf53Q5VUE5 145 aa23.76■■□□□ 1.39
CASC4-204ENST00000557945 CEP170P1Q96L14 293 aa23.76■■□□□ 1.39
CASC4-204ENST00000557945 NIFKQ9BYG3 293 aaKnown RBP23.76■■□□□ 1.39
CASC4-204ENST00000557945 NT5C3AQ9H0P0 336 aa23.76■■□□□ 1.39
CASC4-204ENST00000557945 TRPV6Q9H1D0 765 aa23.76■■□□□ 1.39
CASC4-204ENST00000557945 TRMT13Q9NUP7 481 aaKnown RBP23.76■■□□□ 1.39
CASC4-204ENST00000557945 CCDC39Q9UFE4 941 aa23.76■■□□□ 1.39
CASC4-204ENST00000557945 NOD1Q9Y239 953 aa23.76■■□□□ 1.39
CASC4-204ENST00000557945 COL1A2P08123 1366 aa23.75■■□□□ 1.39
CASC4-204ENST00000557945 GOLGA6L4A6NEF3 574 aa23.75■■□□□ 1.39
CASC4-204ENST00000557945 TLR3O15455 904 aaKnown RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms