RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 STRBPQ96SI9 672 aaKnown RBP12.9□□□□□ -0.34
NEK9-210ENST00000557026 PUS3Q9BZE2 481 aaKnown RBP12.9□□□□□ -0.34
NEK9-210ENST00000557026 LSM7Q9UK45 103 aaKnown RBP12.9□□□□□ -0.34
NEK9-210ENST00000557026 PRR36Q9H6K5 1346 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 KPNA6O60684 536 aa12.9□□□□□ -0.35
NEK9-210ENST00000557026 PDE1BQ01064 536 aa12.9□□□□□ -0.35
NEK9-210ENST00000557026 GRM4Q14833 912 aa12.9□□□□□ -0.35
NEK9-210ENST00000557026 OR6B2Q6IFH4 312 aa12.9□□□□□ -0.35
NEK9-210ENST00000557026 CC2D1AQ6P1N0 951 aaPredicted RBP12.9□□□□□ -0.35
NEK9-210ENST00000557026 NEDD1Q8NHV4 660 aa12.9□□□□□ -0.35
NEK9-210ENST00000557026 CARD6Q9BX69 1037 aa12.9□□□□□ -0.35
NEK9-210ENST00000557026 PCDHA6Q9UN73 950 aa12.9□□□□□ -0.35
NEK9-210ENST00000557026 PCDHA8Q9Y5H6 950 aa12.9□□□□□ -0.35
NEK9-210ENST00000557026 APOEP02649 317 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 SRGAP2CP0DJJ0 459 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 DBN1Q16643 649 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 KLHL7Q8IXQ5 586 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 USP28Q96RU2 1077 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 TEX13BQ9BXU2 312 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 SLC39A2Q9NP94 309 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 VPS18Q9P253 973 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 RSPH14Q9UHP6 348 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 TSPOAP1O95153 1857 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 TRPM1Q7Z4N2 1603 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 DLC1Q96QB1 1528 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 KCNK3O14649 394 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 PSMD3O43242 534 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 SMARCA1P28370 1054 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 QARSP47897 775 aaKnown RBP12.89□□□□□ -0.35
NEK9-210ENST00000557026 IER5Q5VY09 327 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 SKA2Q8WVK7 121 aaPredicted RBP12.89□□□□□ -0.35
NEK9-210ENST00000557026 HDAC11Q96DB2 347 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 TSSK1BQ9BXA7 367 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 SLITRK6Q9H5Y7 841 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 SEPT10Q9P0V9 454 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 MTMR6Q9Y217 621 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 EIF2AK2P19525 551 aaKnown RBP12.89□□□□□ -0.35
NEK9-210ENST00000557026 TAC1P20366 129 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 PNOCQ13519 176 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 ITPRIPL1Q6GPH6 555 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 UNC13DQ70J99 1090 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 SPDYE1Q8NFV5 336 aaPredicted RBP12.89□□□□□ -0.35
NEK9-210ENST00000557026 RILPQ96NA2 401 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 PTPRUQ92729 1446 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 FOXP2O15409 715 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 STAG3L1P0CL83 205 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 DYNLL1P63167 89 aaKnown RBP12.89□□□□□ -0.35
NEK9-210ENST00000557026 UBN1Q9NPG3 1134 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 CYP26B1Q9NR63 512 aa12.89□□□□□ -0.35
NEK9-210ENST00000557026 TBX3O15119 743 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 SERPING1P05155 500 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 ZBED6P86452 979 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 MXD4Q14582 209 aaPredicted RBP12.88□□□□□ -0.35
NEK9-210ENST00000557026 TBC1D10BQ4KMP7 808 aaPredicted RBP12.88□□□□□ -0.35
NEK9-210ENST00000557026 BSPRYQ5W0U4 402 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 TBC1D9BQ66K14 1250 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 ERICH1Q86X53 443 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 XXYLT1Q8NBI6 393 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 ENOX1Q8TC92 643 aaKnown RBP12.88□□□□□ -0.35
NEK9-210ENST00000557026 ATP6V1E2Q96A05 226 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 HEXIM2Q96MH2 286 aaKnown RBP12.88□□□□□ -0.35
NEK9-210ENST00000557026 EPN1Q9Y6I3 576 aaPredicted RBP12.88□□□□□ -0.35
NEK9-210ENST00000557026 FLT1P17948 1338 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 NDUFAB1O14561 156 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 RFC5P40937 340 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 CAV1Q03135 178 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 ELOA2Q8IYF1 753 aaPredicted RBP12.88□□□□□ -0.35
NEK9-210ENST00000557026 ZNF512BQ96KM6 892 aaPredicted RBP12.88□□□□□ -0.35
NEK9-210ENST00000557026 SMARCAD1Q9H4L7 1026 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 TUFT1Q9NNX1 390 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 DYRK4Q9NR20 520 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 NYAP2Q9P242 653 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 SLC13A4Q9UKG4 626 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 PCDHA7Q9UN72 937 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 FRMPD1Q5SYB0 1578 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 C1orf167Q5SNV9 1468 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 DCCP43146 1447 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 GH1P01241 217 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 ABCB4P21439 1286 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 GCLCP48506 637 aaPredicted RBP12.88□□□□□ -0.35
NEK9-210ENST00000557026 GPC3P51654 580 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 FCGRTP55899 365 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 TGFB2P61812 414 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 EPHA7Q15375 998 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 PFKFB3Q16875 520 aaPredicted RBP12.88□□□□□ -0.35
NEK9-210ENST00000557026 C4orf50Q6ZRC1 276 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 CCDC13Q8IYE1 715 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 CEP120Q8N960 986 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 ZBBXA8MT70 800 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 NFX1Q12986 1120 aaKnown RBP12.88□□□□□ -0.35
NEK9-210ENST00000557026 EFHD1Q9BUP0 239 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 TSPYL2Q9H2G4 693 aaPredicted RBP12.88□□□□□ -0.35
NEK9-210ENST00000557026 GPBP1L1Q9HC44 474 aaPredicted RBP12.88□□□□□ -0.35
NEK9-210ENST00000557026 SERPINA10Q9UK55 444 aa12.88□□□□□ -0.35
NEK9-210ENST00000557026 CCDC160A6NGH7 325 aa12.87□□□□□ -0.35
NEK9-210ENST00000557026 CYP27B1O15528 508 aa12.87□□□□□ -0.35
NEK9-210ENST00000557026 MGEA5O60502 916 aa12.87□□□□□ -0.35
NEK9-210ENST00000557026 GPSM2P81274 684 aa12.87□□□□□ -0.35
NEK9-210ENST00000557026 ANKRD13AQ8IZ07 590 aa12.87□□□□□ -0.35
NEK9-210ENST00000557026 CD163L1Q9NR16 1453 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms