RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 SLC34A2O95436 690 aa12.1□□□□□ -0.47
GABRB3-211ENST00000556636 SFNP31947 248 aa12.1□□□□□ -0.47
GABRB3-211ENST00000556636 IGBP1P78318 339 aa12.1□□□□□ -0.47
GABRB3-211ENST00000556636 SPIRE1Q08AE8 756 aa12.1□□□□□ -0.47
GABRB3-211ENST00000556636 MGAT3Q09327 533 aa12.1□□□□□ -0.47
GABRB3-211ENST00000556636 PPP2R5CQ13362 524 aa12.1□□□□□ -0.47
GABRB3-211ENST00000556636 MKRN4PQ13434 485 aaPredicted RBP12.1□□□□□ -0.47
GABRB3-211ENST00000556636 CUL4AQ13619 759 aa12.1□□□□□ -0.47
GABRB3-211ENST00000556636 UGCGQ16739 394 aa12.1□□□□□ -0.47
GABRB3-211ENST00000556636 TAF2Q6P1X5 1199 aa12.1□□□□□ -0.47
GABRB3-211ENST00000556636 MTHFD1LQ6UB35 978 aa12.1□□□□□ -0.47
GABRB3-211ENST00000556636 POTEDQ86YR6 584 aa12.1□□□□□ -0.47
GABRB3-211ENST00000556636 FAM184AQ8NB25 1140 aa12.1□□□□□ -0.47
GABRB3-211ENST00000556636 RDM1Q8NG50 284 aa12.1□□□□□ -0.47
GABRB3-211ENST00000556636 DNAJB3Q8WWF6 145 aa12.1□□□□□ -0.47
GABRB3-211ENST00000556636 MTMR9Q96QG7 549 aa12.1□□□□□ -0.47
GABRB3-211ENST00000556636 NAP1L4Q99733 375 aaKnown RBP12.1□□□□□ -0.47
GABRB3-211ENST00000556636 FOXP1Q9H334 677 aaPredicted RBP12.1□□□□□ -0.47
GABRB3-211ENST00000556636 TUBE1Q9UJT0 475 aa12.1□□□□□ -0.47
GABRB3-211ENST00000556636 TRPC6Q9Y210 931 aa12.1□□□□□ -0.47
GABRB3-211ENST00000556636 PCDHA2Q9Y5H9 948 aa12.1□□□□□ -0.47
GABRB3-211ENST00000556636 IGSF9BQ9UPX0 1349 aa12.1□□□□□ -0.47
GABRB3-211ENST00000556636 CHMP2AO43633 222 aa12.09□□□□□ -0.47
GABRB3-211ENST00000556636 U2AF2P26368 475 aaKnown RBP eCLIP12.09□□□□□ -0.47
GABRB3-211ENST00000556636 KLRC1P26715 233 aa12.09□□□□□ -0.47
GABRB3-211ENST00000556636 JAK3P52333 1124 aa12.09□□□□□ -0.47
GABRB3-211ENST00000556636 SAFBQ15424 915 aaKnown RBP eCLIP12.09□□□□□ -0.47
GABRB3-211ENST00000556636 PLEKHG4Q58EX7 1191 aa12.09□□□□□ -0.47
GABRB3-211ENST00000556636 ZNF484Q5JVG2 852 aa12.09□□□□□ -0.47
GABRB3-211ENST00000556636 MIER3Q7Z3K6 550 aa12.09□□□□□ -0.47
GABRB3-211ENST00000556636 KIAA0319LQ8IZA0 1049 aa12.09□□□□□ -0.47
GABRB3-211ENST00000556636 DBF4BQ8NFT6 615 aa12.09□□□□□ -0.47
GABRB3-211ENST00000556636 BBXQ8WY36 941 aaPredicted RBP12.09□□□□□ -0.47
GABRB3-211ENST00000556636 TNPO1Q92973 898 aaKnown RBP12.09□□□□□ -0.47
GABRB3-211ENST00000556636 CEP89Q96ST8 783 aa12.09□□□□□ -0.47
GABRB3-211ENST00000556636 FTOQ9C0B1 505 aaKnown RBP eCLIP12.09□□□□□ -0.47
GABRB3-211ENST00000556636 TMEM60Q9H2L4 133 aa12.09□□□□□ -0.47
GABRB3-211ENST00000556636 SAMM50Q9Y512 469 aa12.09□□□□□ -0.47
GABRB3-211ENST00000556636 SMIM35A0A1B0GVV1 85 aa12.08□□□□□ -0.48
GABRB3-211ENST00000556636 CTSHP09668 335 aa12.08□□□□□ -0.48
GABRB3-211ENST00000556636 GJB2P29033 226 aa12.08□□□□□ -0.48
GABRB3-211ENST00000556636 PBX2P40425 430 aa12.08□□□□□ -0.48
GABRB3-211ENST00000556636 TOB1P50616 345 aaPredicted RBP12.08□□□□□ -0.48
GABRB3-211ENST00000556636 TARBP2Q15633 366 aaKnown RBP12.08□□□□□ -0.48
GABRB3-211ENST00000556636 Q7L0L9 218 aa12.08□□□□□ -0.48
GABRB3-211ENST00000556636 TRMT1LQ7Z2T5 733 aaKnown RBP12.08□□□□□ -0.48
GABRB3-211ENST00000556636 PBX4Q9BYU1 374 aa12.08□□□□□ -0.48
GABRB3-211ENST00000556636 WRAP73Q9P2S5 460 aaPredicted RBP12.08□□□□□ -0.48
GABRB3-211ENST00000556636 SLC4A7Q9Y6M7 1214 aa12.08□□□□□ -0.48
GABRB3-211ENST00000556636 SCN5AQ14524 2016 aa12.08□□□□□ -0.48
GABRB3-211ENST00000556636 COL1A2P08123 1366 aa12.07□□□□□ -0.48
GABRB3-211ENST00000556636 C22orf31O95567 290 aa12.07□□□□□ -0.48
GABRB3-211ENST00000556636 OATP04181 439 aa12.07□□□□□ -0.48
GABRB3-211ENST00000556636 EPHA7Q15375 998 aa12.07□□□□□ -0.48
GABRB3-211ENST00000556636 CNKSR3Q6P9H4 555 aa12.07□□□□□ -0.48
GABRB3-211ENST00000556636 NOSTRINQ8IVI9 506 aa12.07□□□□□ -0.48
GABRB3-211ENST00000556636 CKAP2LQ8IYA6 745 aa12.07□□□□□ -0.48
GABRB3-211ENST00000556636 LINC01465Q8N7H1 131 aa12.07□□□□□ -0.48
GABRB3-211ENST00000556636 C4orf32Q8N8J7 132 aa12.07□□□□□ -0.48
GABRB3-211ENST00000556636 NIFKQ9BYG3 293 aaKnown RBP12.07□□□□□ -0.48
GABRB3-211ENST00000556636 TTYH1Q9H313 450 aaPredicted RBP12.07□□□□□ -0.48
GABRB3-211ENST00000556636 SEMA6BQ9H3T3 888 aa12.07□□□□□ -0.48
GABRB3-211ENST00000556636 NRBP2Q9NSY0 501 aa12.07□□□□□ -0.48
GABRB3-211ENST00000556636 MTMR10Q9NXD2 777 aa12.07□□□□□ -0.48
GABRB3-211ENST00000556636 TCEAL9Q9UHQ7 104 aa12.07□□□□□ -0.48
GABRB3-211ENST00000556636 ABHD14A-ACY1A0A1B0GW23 586 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 TMEM150BA6NC51 233 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 BAIAP3O94812 1187 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 SLITRK3O94933 977 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 BAG4O95429 457 aaKnown RBP12.06□□□□□ -0.48
GABRB3-211ENST00000556636 ACTN1P12814 892 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 ATP2B1P20020 1258 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 RABGGTBP53611 331 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 WDR5P61964 334 aaKnown RBP12.06□□□□□ -0.48
GABRB3-211ENST00000556636 MRPS6P82932 125 aaKnown RBP12.06□□□□□ -0.48
GABRB3-211ENST00000556636 PRKCEQ02156 737 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 LPIN1Q14693 890 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 ZNF174Q15697 407 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 CALCRLQ16602 461 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 FBXO47Q5MNV8 452 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.06□□□□□ -0.48
GABRB3-211ENST00000556636 SLFN12Q8IYM2 578 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 NME8Q8N427 588 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 DEFB123Q8N688 67 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 BANK1Q8NDB2 785 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 PHOSPHO2Q8TCD6 241 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 HSD17B14Q9BPX1 270 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 FAM49AQ9H0Q0 323 aaPredicted RBP12.06□□□□□ -0.48
GABRB3-211ENST00000556636 MTIF3Q9H2K0 278 aaKnown RBP12.06□□□□□ -0.48
GABRB3-211ENST00000556636 AGO3Q9H9G7 860 aaKnown RBP12.06□□□□□ -0.48
GABRB3-211ENST00000556636 CDHR5Q9HBB8 845 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 RGL1Q9NZL6 768 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 PCDHA12Q9UN75 941 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 YBX2Q9Y2T7 364 aaKnown RBP12.06□□□□□ -0.48
GABRB3-211ENST00000556636 CDY2AQ9Y6F7 541 aa12.06□□□□□ -0.48
GABRB3-211ENST00000556636 ZBBXA8MT70 800 aa12.05□□□□□ -0.48
GABRB3-211ENST00000556636 ZBTB39O15060 712 aa12.05□□□□□ -0.48
GABRB3-211ENST00000556636 NEMFO60524 1076 aa12.05□□□□□ -0.48
GABRB3-211ENST00000556636 RPLP2P05387 115 aaKnown RBP12.05□□□□□ -0.48
GABRB3-211ENST00000556636 P4HBP07237 508 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms