RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 EXOSC6Q5RKV6 272 aaKnown RBP10.81□□□□□ -0.68
GTF2A1-204ENST00000556268 CEP85Q6P2H3 762 aa10.81□□□□□ -0.68
GTF2A1-204ENST00000556268 SLC39A5Q6ZMH5 540 aa10.81□□□□□ -0.68
GTF2A1-204ENST00000556268 DTHD1Q6ZMT9 781 aa10.81□□□□□ -0.68
GTF2A1-204ENST00000556268 ABRAQ8N0Z2 381 aa10.81□□□□□ -0.68
GTF2A1-204ENST00000556268 C12orf50Q8NA57 414 aaPredicted RBP10.81□□□□□ -0.68
GTF2A1-204ENST00000556268 GUCD1Q96NT3 240 aa10.81□□□□□ -0.68
GTF2A1-204ENST00000556268 FEZ1Q99689 392 aa10.81□□□□□ -0.68
GTF2A1-204ENST00000556268 LBHD1Q9BQE6 289 aaPredicted RBP10.81□□□□□ -0.68
GTF2A1-204ENST00000556268 SPATC1LQ9H0A9 340 aa10.81□□□□□ -0.68
GTF2A1-204ENST00000556268 C7orf69Q9H7B7 122 aa10.81□□□□□ -0.68
GTF2A1-204ENST00000556268 ADAMTS5Q9UNA0 930 aa10.81□□□□□ -0.68
GTF2A1-204ENST00000556268 FOCADQ5VW36 1801 aa10.81□□□□□ -0.68
GTF2A1-204ENST00000556268 MYO5AQ9Y4I1 1855 aaKnown RBP10.81□□□□□ -0.68
GTF2A1-204ENST00000556268 SCO2A0A1W2PP80 73 aa10.8□□□□□ -0.68
GTF2A1-204ENST00000556268 TCRBV5S4A2TA0A5A2 114 aa10.8□□□□□ -0.68
GTF2A1-204ENST00000556268 SEPT4O43236 478 aa10.8□□□□□ -0.68
GTF2A1-204ENST00000556268 ERCC3P19447 782 aa10.8□□□□□ -0.68
GTF2A1-204ENST00000556268 ADORA2AP29274 412 aa10.8□□□□□ -0.68
GTF2A1-204ENST00000556268 RTP1P59025 263 aa10.8□□□□□ -0.68
GTF2A1-204ENST00000556268 NXPE4Q6UWF7 544 aa10.8□□□□□ -0.68
GTF2A1-204ENST00000556268 DPP9Q86TI2 863 aa10.8□□□□□ -0.68
GTF2A1-204ENST00000556268 ERC1Q8IUD2 1116 aa10.8□□□□□ -0.68
GTF2A1-204ENST00000556268 TRIM42Q8IWZ5 723 aa10.8□□□□□ -0.68
GTF2A1-204ENST00000556268 MB21D1Q8N884 522 aa10.8□□□□□ -0.68
GTF2A1-204ENST00000556268 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.8□□□□□ -0.68
GTF2A1-204ENST00000556268 CORO1BQ9BR76 489 aa10.8□□□□□ -0.68
GTF2A1-204ENST00000556268 KCNF1Q9H3M0 494 aa10.8□□□□□ -0.68
GTF2A1-204ENST00000556268 CWC22Q9HCG8 908 aaKnown RBP10.8□□□□□ -0.68
GTF2A1-204ENST00000556268 DCP1AQ9NPI6 582 aaPredicted RBP10.8□□□□□ -0.68
GTF2A1-204ENST00000556268 HIF3AQ9Y2N7 669 aa10.8□□□□□ -0.68
GTF2A1-204ENST00000556268 UNC80Q8N2C7 3258 aa10.8□□□□□ -0.68
GTF2A1-204ENST00000556268 HMX2A2RU54 273 aa10.79□□□□□ -0.68
GTF2A1-204ENST00000556268 DRD2P14416 443 aa10.79□□□□□ -0.68
GTF2A1-204ENST00000556268 PDE6AP16499 860 aa10.79□□□□□ -0.68
GTF2A1-204ENST00000556268 CNGA1P29973 690 aa10.79□□□□□ -0.68
GTF2A1-204ENST00000556268 TTF1Q15361 905 aaPredicted RBP10.79□□□□□ -0.68
GTF2A1-204ENST00000556268 SGO2Q562F6 1265 aa10.79□□□□□ -0.68
GTF2A1-204ENST00000556268 GJC2Q5T442 439 aaPredicted RBP10.79□□□□□ -0.68
GTF2A1-204ENST00000556268 SLC9C2Q5TAH2 1124 aa10.79□□□□□ -0.68
GTF2A1-204ENST00000556268 WDR78Q5VTH9 848 aa10.79□□□□□ -0.68
GTF2A1-204ENST00000556268 AACSQ86V21 672 aa10.79□□□□□ -0.68
GTF2A1-204ENST00000556268 FBF1Q8TES7 1133 aa10.79□□□□□ -0.68
GTF2A1-204ENST00000556268 MROH8Q9H579 483 aa10.79□□□□□ -0.68
GTF2A1-204ENST00000556268 MCM9Q9NXL9 1143 aa10.79□□□□□ -0.68
GTF2A1-204ENST00000556268 NRBP1Q9UHY1 535 aa10.79□□□□□ -0.68
GTF2A1-204ENST00000556268 TMX2Q9Y320 296 aa10.79□□□□□ -0.68
GTF2A1-204ENST00000556268 IGLV1-40P01703 118 aa10.78□□□□□ -0.68
GTF2A1-204ENST00000556268 P4HBP07237 508 aaKnown RBP10.78□□□□□ -0.68
GTF2A1-204ENST00000556268 SHHQ15465 462 aa10.78□□□□□ -0.68
GTF2A1-204ENST00000556268 PRAMEF19Q5SWL8 479 aa10.78□□□□□ -0.68
GTF2A1-204ENST00000556268 BEND4Q6ZU67 534 aa10.78□□□□□ -0.68
GTF2A1-204ENST00000556268 TMEM179Q6ZVK1 233 aa10.78□□□□□ -0.68
GTF2A1-204ENST00000556268 SND1Q7KZF4 910 aaKnown RBP eCLIP10.78□□□□□ -0.68
GTF2A1-204ENST00000556268 CRNKL1Q9BZJ0 848 aaKnown RBP10.78□□□□□ -0.68
GTF2A1-204ENST00000556268 SWAP70Q9UH65 585 aa10.78□□□□□ -0.68
GTF2A1-204ENST00000556268 EXOC6BQ9Y2D4 811 aa10.78□□□□□ -0.68
GTF2A1-204ENST00000556268 ZNF532Q9HCE3 1301 aa10.78□□□□□ -0.68
GTF2A1-204ENST00000556268 MYH1P12882 1939 aa10.78□□□□□ -0.68
GTF2A1-204ENST00000556268 TRIM43BA6NCK2 446 aa10.77□□□□□ -0.69
GTF2A1-204ENST00000556268 GSC2O15499 205 aa10.77□□□□□ -0.69
GTF2A1-204ENST00000556268 CYP2D6P10635 497 aa10.77□□□□□ -0.69
GTF2A1-204ENST00000556268 ADH5P11766 374 aa10.77□□□□□ -0.69
GTF2A1-204ENST00000556268 AP3B2Q13367 1082 aa10.77□□□□□ -0.69
GTF2A1-204ENST00000556268 LRRC41Q15345 812 aa10.77□□□□□ -0.69
GTF2A1-204ENST00000556268 HSP90AB4PQ58FF6 505 aa10.77□□□□□ -0.69
GTF2A1-204ENST00000556268 CLEC10AQ8IUN9 316 aa10.77□□□□□ -0.69
GTF2A1-204ENST00000556268 ITPRIPQ8IWB1 547 aa10.77□□□□□ -0.69
GTF2A1-204ENST00000556268 FTSJ3Q8IY81 847 aaKnown RBP10.77□□□□□ -0.69
GTF2A1-204ENST00000556268 TRIM43Q96BQ3 446 aaPredicted RBP10.77□□□□□ -0.69
GTF2A1-204ENST00000556268 MAML3Q96JK9 1138 aa10.77□□□□□ -0.69
GTF2A1-204ENST00000556268 CCDC17Q96LX7 622 aa10.77□□□□□ -0.69
GTF2A1-204ENST00000556268 VCPKMTQ9H867 229 aa10.77□□□□□ -0.69
GTF2A1-204ENST00000556268 ATP8A2Q9NTI2 1148 aa10.77□□□□□ -0.69
GTF2A1-204ENST00000556268 PPP4R2Q9NY27 417 aa10.77□□□□□ -0.69
GTF2A1-204ENST00000556268 SLC5A4Q9NY91 659 aa10.77□□□□□ -0.69
GTF2A1-204ENST00000556268 PRKAG2Q9UGJ0 569 aa10.77□□□□□ -0.69
GTF2A1-204ENST00000556268 DIS3Q9Y2L1 958 aaKnown RBP10.77□□□□□ -0.69
GTF2A1-204ENST00000556268 MAST2Q6P0Q8 1798 aa10.77□□□□□ -0.69
GTF2A1-204ENST00000556268 SMIM22K7EJ46 135 aa10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 MPHOSPH10O00566 681 aaKnown RBP10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 SLC25A27O95847 323 aa10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 MAP4P27816 1152 aaKnown RBP10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 ADCYAP1R1P41586 468 aa10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 SOX4Q06945 474 aaPredicted RBP10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 TMEM132BQ14DG7 1078 aa10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 ZNF792Q3KQV3 632 aa10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 HP1BP3Q5SSJ5 553 aaPredicted RBP10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 C9orf50Q5SZB4 431 aa10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 XP32Q5T750 250 aa10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 C12orf60Q5U649 245 aa10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 SIRT2Q8IXJ6 389 aa10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 LCORLQ8N3X6 602 aa10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 SLC44A5Q8NCS7 719 aa10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 C2CD4AQ8NCU7 369 aaPredicted RBP10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 SDR42E1Q8WUS8 393 aa10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 BADQ92934 168 aa10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 ATG4CQ96DT6 458 aa10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 DYNLL2Q96FJ2 89 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms