RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 SNHG28P0DPA3 235 aa7.29□□□□□ -1.24
PSEN1-214ENST00000555867 PTGS1P23219 599 aa7.29□□□□□ -1.24
PSEN1-214ENST00000555867 FSHRP23945 695 aa7.29□□□□□ -1.24
PSEN1-214ENST00000555867 PPP1R2P41236 205 aa7.29□□□□□ -1.24
PSEN1-214ENST00000555867 SARSP49591 514 aaKnown RBP7.29□□□□□ -1.24
PSEN1-214ENST00000555867 NAPAP54920 295 aa7.29□□□□□ -1.24
PSEN1-214ENST00000555867 MAP3K10Q02779 954 aa7.29□□□□□ -1.24
PSEN1-214ENST00000555867 PNOCQ13519 176 aa7.29□□□□□ -1.24
PSEN1-214ENST00000555867 MORC3Q14149 939 aa7.29□□□□□ -1.24
PSEN1-214ENST00000555867 NONOQ15233 471 aaKnown RBP eCLIP7.29□□□□□ -1.24
PSEN1-214ENST00000555867 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.29□□□□□ -1.24
PSEN1-214ENST00000555867 GJC2Q5T442 439 aaPredicted RBP7.29□□□□□ -1.24
PSEN1-214ENST00000555867 WWC2Q6AWC2 1192 aa7.29□□□□□ -1.24
PSEN1-214ENST00000555867 MCTP2Q6DN12 878 aa7.29□□□□□ -1.24
PSEN1-214ENST00000555867 PIK3AP1Q6ZUJ8 805 aa7.29□□□□□ -1.24
PSEN1-214ENST00000555867 TMEM151AQ8N4L1 468 aa7.29□□□□□ -1.24
PSEN1-214ENST00000555867 ENOX1Q8TC92 643 aaKnown RBP7.29□□□□□ -1.24
PSEN1-214ENST00000555867 GAS2L1Q99501 681 aaPredicted RBP7.29□□□□□ -1.24
PSEN1-214ENST00000555867 RIOX1Q9H6W3 641 aa7.29□□□□□ -1.24
PSEN1-214ENST00000555867 KCND1Q9NSA2 647 aa7.29□□□□□ -1.24
PSEN1-214ENST00000555867 MTMR4Q9NYA4 1195 aa7.29□□□□□ -1.24
PSEN1-214ENST00000555867 MORF4L1Q9UBU8 362 aa7.29□□□□□ -1.24
PSEN1-214ENST00000555867 SAP30BPQ9UHR5 308 aaKnown RBP7.29□□□□□ -1.24
PSEN1-214ENST00000555867 SERTAD1Q9UHV2 236 aa7.29□□□□□ -1.24
PSEN1-214ENST00000555867 SYNPO2Q9UMS6 1093 aa7.29□□□□□ -1.24
PSEN1-214ENST00000555867 XIRP2A4UGR9 3374 aa7.29□□□□□ -1.24
PSEN1-214ENST00000555867 IGKV6D-41A0A0C4DH26 115 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 VWA3AA6NCI4 1184 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 DNM1LO00429 736 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 BIN1O00499 593 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 CTNND1O60716 968 aaKnown RBP7.28□□□□□ -1.24
PSEN1-214ENST00000555867 GPR37L1O60883 481 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 PDHBP11177 359 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 ATP2B1P20020 1258 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 IGFBP4P22692 258 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 SFPQP23246 707 aaKnown RBP eCLIP7.28□□□□□ -1.24
PSEN1-214ENST00000555867 HMGCS2P54868 508 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 FANCCQ00597 558 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 SPAG1Q07617 926 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 SPP2Q13103 211 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 NCAPHQ15003 741 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 SNX17Q15036 470 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 ZNF174Q15697 407 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 DTHD1Q6ZMT9 781 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 VASH1Q7L8A9 365 aaPredicted RBP7.28□□□□□ -1.24
PSEN1-214ENST00000555867 HEATR3Q7Z4Q2 680 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 LRRC8AQ8IWT6 810 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 PARP9Q8IXQ6 854 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 TRMT44Q8IYL2 757 aaKnown RBP7.28□□□□□ -1.24
PSEN1-214ENST00000555867 STAG2Q8N3U4 1231 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 SLC44A5Q8NCS7 719 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 TRPV1Q8NER1 839 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 CCDC47Q96A33 483 aaKnown RBP7.28□□□□□ -1.24
PSEN1-214ENST00000555867 CEP95Q96GE4 821 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 CTAGE1Q96RT6 745 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 P2RX7Q99572 595 aaKnown RBP7.28□□□□□ -1.24
PSEN1-214ENST00000555867 IDI2Q9BXS1 227 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 TRIM34Q9BYJ4 488 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 RAB34Q9BZG1 259 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 CCSER1Q9C0I3 900 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 PORCNQ9H237 461 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 KCNF1Q9H3M0 494 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 USP40Q9NVE5 1235 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 CXXC1Q9P0U4 656 aaPredicted RBP7.28□□□□□ -1.24
PSEN1-214ENST00000555867 DDX20Q9UHI6 824 aaKnown RBP7.28□□□□□ -1.24
PSEN1-214ENST00000555867 MAN1B1Q9UKM7 699 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 DOCK1Q14185 1865 aa7.28□□□□□ -1.24
PSEN1-214ENST00000555867 MYH7BA7E2Y1 1941 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 hCG_1642624A0A1W2PR95 340 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 DDTLA6NHG4 134 aaPredicted RBP7.27□□□□□ -1.25
PSEN1-214ENST00000555867 TTLL8A6PVC2 850 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 DYNC1I1O14576 645 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 SLC26A4O43511 780 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 CYTH3O43739 400 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 ENTPD3O75355 529 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 SERPINC1P01008 464 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 MCM7P33993 719 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 UBASH3AP57075 661 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 KRT76Q01546 638 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 TLE2Q04725 743 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 TRAF1Q13077 416 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 PICALMQ13492 652 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 RRP1BQ14684 758 aaKnown RBP7.27□□□□□ -1.25
PSEN1-214ENST00000555867 GPR142Q7Z601 462 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 MTERF4Q7Z6M4 381 aaKnown RBP7.27□□□□□ -1.25
PSEN1-214ENST00000555867 NEK8Q86SG6 692 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 FCHSD1Q86WN1 690 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 FOXP4Q8IVH2 680 aaPredicted RBP7.27□□□□□ -1.25
PSEN1-214ENST00000555867 CCDC116Q8IYX3 515 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 REXO1Q8N1G1 1221 aaKnown RBP7.27□□□□□ -1.25
PSEN1-214ENST00000555867 PROCA1Q8NCQ7 364 aaPredicted RBP7.27□□□□□ -1.25
PSEN1-214ENST00000555867 ANKRD20A12PQ8NF67 263 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 DCAF4Q8WV16 495 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 SOCS4Q8WXH5 440 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 TSC1Q92574 1164 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 LPAR1Q92633 364 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 GPKOWQ92917 476 aaPredicted RBP eCLIP7.27□□□□□ -1.25
PSEN1-214ENST00000555867 DHX58Q96C10 678 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 CNTNAP3BQ96NU0 1288 aa7.27□□□□□ -1.25
PSEN1-214ENST00000555867 PBX4Q9BYU1 374 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms