RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 TRDNQ13061 729 aa21.8■■□□□ 1.08
SUPT16H-203ENST00000555752 PAK2Q13177 524 aa21.8■■□□□ 1.08
SUPT16H-203ENST00000555752 ATP8B4Q8TF62 1192 aa21.8■■□□□ 1.08
SUPT16H-203ENST00000555752 ATOH1Q92858 354 aaPredicted RBP21.8■■□□□ 1.08
SUPT16H-203ENST00000555752 MYL10Q9BUA6 226 aa21.8■■□□□ 1.08
SUPT16H-203ENST00000555752 APOL5Q9BWW9 433 aa21.8■■□□□ 1.08
SUPT16H-203ENST00000555752 ZFHX2Q9C0A1 2572 aaPredicted RBP21.8■■□□□ 1.08
SUPT16H-203ENST00000555752 IGSF9BQ9UPX0 1349 aa21.8■■□□□ 1.08
SUPT16H-203ENST00000555752 PLXNA3P51805 1871 aa21.79■■□□□ 1.08
SUPT16H-203ENST00000555752 MYO15AQ9UKN7 3530 aa21.79■■□□□ 1.08
SUPT16H-203ENST00000555752 H0Y858 1186 aa21.79■■□□□ 1.08
SUPT16H-203ENST00000555752 MGEA5O60502 916 aa21.79■■□□□ 1.08
SUPT16H-203ENST00000555752 PTPN21Q16825 1174 aa21.79■■□□□ 1.08
SUPT16H-203ENST00000555752 DUSP6Q16828 381 aa21.79■■□□□ 1.08
SUPT16H-203ENST00000555752 CELF4Q9BZC1 486 aaKnown RBP21.79■■□□□ 1.08
SUPT16H-203ENST00000555752 TLR9Q9NR96 1032 aa21.79■■□□□ 1.08
SUPT16H-203ENST00000555752 LRFN2Q9ULH4 789 aa21.79■■□□□ 1.08
SUPT16H-203ENST00000555752 FNDC1Q4ZHG4 1894 aaPredicted RBP21.79■■□□□ 1.08
SUPT16H-203ENST00000555752 CACNA1HO95180 2353 aa21.79■■□□□ 1.08
SUPT16H-203ENST00000555752 ERICH2A1L162 156 aa21.78■■□□□ 1.08
SUPT16H-203ENST00000555752 MTMR1Q13613 665 aa21.78■■□□□ 1.08
SUPT16H-203ENST00000555752 UBE2SQ16763 222 aa21.78■■□□□ 1.08
SUPT16H-203ENST00000555752 SPOUT1Q5T280 376 aaKnown RBP21.78■■□□□ 1.08
SUPT16H-203ENST00000555752 TRPC6Q9Y210 931 aa21.78■■□□□ 1.08
SUPT16H-203ENST00000555752 UBIAD1Q9Y5Z9 338 aa21.78■■□□□ 1.08
SUPT16H-203ENST00000555752 SQORQ9Y6N5 450 aa21.78■■□□□ 1.08
SUPT16H-203ENST00000555752 RRN3P2A6NIE6 340 aa21.77■■□□□ 1.08
SUPT16H-203ENST00000555752 M0QZ92 97 aa21.77■■□□□ 1.08
SUPT16H-203ENST00000555752 FGF18O76093 207 aa21.77■■□□□ 1.08
SUPT16H-203ENST00000555752 IGHDP01880 384 aa21.77■■□□□ 1.08
SUPT16H-203ENST00000555752 ATF7P17544 494 aaPredicted RBP21.77■■□□□ 1.08
SUPT16H-203ENST00000555752 ANTXR2P58335 489 aa21.77■■□□□ 1.08
SUPT16H-203ENST00000555752 NUCB1Q02818 461 aa21.77■■□□□ 1.08
SUPT16H-203ENST00000555752 PTH1RQ03431 593 aa21.77■■□□□ 1.08
SUPT16H-203ENST00000555752 APOBRQ0VD83 1088 aa21.77■■□□□ 1.08
SUPT16H-203ENST00000555752 NFX1Q12986 1120 aaKnown RBP21.77■■□□□ 1.08
SUPT16H-203ENST00000555752 FAM102BQ5T8I3 360 aa21.77■■□□□ 1.08
SUPT16H-203ENST00000555752 CATIPQ7Z7H3 387 aa21.77■■□□□ 1.08
SUPT16H-203ENST00000555752 RRP36Q96EU6 259 aaKnown RBP21.77■■□□□ 1.08
SUPT16H-203ENST00000555752 CDHR1Q96JP9 859 aa21.77■■□□□ 1.08
SUPT16H-203ENST00000555752 NEK1Q96PY6 1258 aa21.77■■□□□ 1.08
SUPT16H-203ENST00000555752 S1PR5Q9H228 398 aa21.77■■□□□ 1.08
SUPT16H-203ENST00000555752 CDH22Q9UJ99 828 aa21.77■■□□□ 1.08
SUPT16H-203ENST00000555752 PCDHA2Q9Y5H9 948 aa21.77■■□□□ 1.08
SUPT16H-203ENST00000555752 TBKBP1A7MCY6 615 aa21.76■■□□□ 1.07
SUPT16H-203ENST00000555752 SARSP49591 514 aaKnown RBP21.76■■□□□ 1.07
SUPT16H-203ENST00000555752 PLCB4Q15147 1175 aa21.76■■□□□ 1.07
SUPT16H-203ENST00000555752 CMTR1Q8N1G2 835 aaKnown RBP21.76■■□□□ 1.07
SUPT16H-203ENST00000555752 SPZ1Q9BXG8 430 aa21.76■■□□□ 1.07
SUPT16H-203ENST00000555752 CDHR5Q9HBB8 845 aa21.76■■□□□ 1.07
SUPT16H-203ENST00000555752 TMEM260Q9NX78 707 aa21.76■■□□□ 1.07
SUPT16H-203ENST00000555752 PCDHB12Q9Y5F1 795 aa21.76■■□□□ 1.07
SUPT16H-203ENST00000555752 E7EWF7 191 aa21.75■■□□□ 1.07
SUPT16H-203ENST00000555752 PLEKHA8P1O95397 391 aa21.75■■□□□ 1.07
SUPT16H-203ENST00000555752 KRT76Q01546 638 aa21.75■■□□□ 1.07
SUPT16H-203ENST00000555752 KCNC3Q14003 757 aa21.75■■□□□ 1.07
SUPT16H-203ENST00000555752 LLGL2Q6P1M3 1020 aa21.75■■□□□ 1.07
SUPT16H-203ENST00000555752 SYCE2Q6PIF2 218 aa21.75■■□□□ 1.07
SUPT16H-203ENST00000555752 THNSL1Q8IYQ7 743 aa21.75■■□□□ 1.07
SUPT16H-203ENST00000555752 IGDCC4Q8TDY8 1250 aa21.75■■□□□ 1.07
SUPT16H-203ENST00000555752 TMEM40Q8WWA1 233 aa21.75■■□□□ 1.07
SUPT16H-203ENST00000555752 PSTPIP2Q9H939 334 aa21.75■■□□□ 1.07
SUPT16H-203ENST00000555752 ERVK-5Q9HDB9 667 aa21.75■■□□□ 1.07
SUPT16H-203ENST00000555752 JPH1Q9HDC5 661 aaPredicted RBP21.75■■□□□ 1.07
SUPT16H-203ENST00000555752 JADE2Q9NQC1 790 aa21.75■■□□□ 1.07
SUPT16H-203ENST00000555752 TYW1Q9NV66 732 aaKnown RBP21.75■■□□□ 1.07
SUPT16H-203ENST00000555752 GINS2Q9Y248 185 aa21.75■■□□□ 1.07
SUPT16H-203ENST00000555752 PCDHB7Q9Y5E2 793 aa21.75■■□□□ 1.07
SUPT16H-203ENST00000555752 hCG_1642624A0A1W2PR95 340 aa21.74■■□□□ 1.07
SUPT16H-203ENST00000555752 FSCN2O14926 492 aa21.74■■□□□ 1.07
SUPT16H-203ENST00000555752 TECP42680 631 aa21.74■■□□□ 1.07
SUPT16H-203ENST00000555752 UBE3AQ05086 875 aa21.74■■□□□ 1.07
SUPT16H-203ENST00000555752 PLPP4Q5VZY2 271 aa21.74■■□□□ 1.07
SUPT16H-203ENST00000555752 RALYLQ86SE5 291 aaKnown RBP21.74■■□□□ 1.07
SUPT16H-203ENST00000555752 COLGALT1Q8NBJ5 622 aa21.74■■□□□ 1.07
SUPT16H-203ENST00000555752 AZI2Q9H6S1 392 aa21.74■■□□□ 1.07
SUPT16H-203ENST00000555752 SEC63Q9UGP8 760 aaKnown RBP21.74■■□□□ 1.07
SUPT16H-203ENST00000555752 NOC2LQ9Y3T9 749 aaKnown RBP21.74■■□□□ 1.07
SUPT16H-203ENST00000555752 RPLP2P05387 115 aaKnown RBP21.73■■□□□ 1.07
SUPT16H-203ENST00000555752 FGFR1P11362 822 aa21.73■■□□□ 1.07
SUPT16H-203ENST00000555752 SART3Q15020 963 aaKnown RBP21.73■■□□□ 1.07
SUPT16H-203ENST00000555752 ANKRD54Q6NXT1 300 aa21.73■■□□□ 1.07
SUPT16H-203ENST00000555752 MTHFD1LQ6UB35 978 aa21.73■■□□□ 1.07
SUPT16H-203ENST00000555752 ASCL5Q7RTU5 278 aa21.73■■□□□ 1.07
SUPT16H-203ENST00000555752 ZBTB33Q86T24 672 aa21.73■■□□□ 1.07
SUPT16H-203ENST00000555752 ZNF654Q8IZM8 581 aa21.73■■□□□ 1.07
SUPT16H-203ENST00000555752 SRBD1Q8N5C6 995 aaKnown RBP21.73■■□□□ 1.07
SUPT16H-203ENST00000555752 NCOA7Q8NI08 942 aa21.73■■□□□ 1.07
SUPT16H-203ENST00000555752 CTCFLQ8NI51 663 aaPredicted RBP21.73■■□□□ 1.07
SUPT16H-203ENST00000555752 CYP2W1Q8TAV3 490 aa21.73■■□□□ 1.07
SUPT16H-203ENST00000555752 RIPOR3Q96MK2 946 aa21.73■■□□□ 1.07
SUPT16H-203ENST00000555752 ADAM2Q99965 735 aa21.73■■□□□ 1.07
SUPT16H-203ENST00000555752 SMOC2Q9H3U7 446 aa21.73■■□□□ 1.07
SUPT16H-203ENST00000555752 RWDD1Q9H446 243 aaPredicted RBP21.73■■□□□ 1.07
SUPT16H-203ENST00000555752 SLC9A2Q9UBY0 812 aa21.73■■□□□ 1.07
SUPT16H-203ENST00000555752 U3KPZ7 1027 aaPredicted RBP21.73■■□□□ 1.07
SUPT16H-203ENST00000555752 KDM3AQ9Y4C1 1321 aa21.73■■□□□ 1.07
SUPT16H-203ENST00000555752 HIDE1A8MVS5 230 aa21.72■■□□□ 1.07
SUPT16H-203ENST00000555752 ACTR2P61160 394 aa21.72■■□□□ 1.07
SUPT16H-203ENST00000555752 KREMEN2Q8NCW0 462 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms