RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 CUTAO60888 179 aa5.98□□□□□ -1.45
SNX6-204ENST00000555541 GNL2Q13823 731 aaKnown RBP5.98□□□□□ -1.45
SNX6-204ENST00000555541 BTBD8Q5XKL5 378 aa5.98□□□□□ -1.45
SNX6-204ENST00000555541 CFHR4Q92496 578 aa5.98□□□□□ -1.45
SNX6-204ENST00000555541 TRAV20A0A0B4J274 112 aa5.97□□□□□ -1.45
SNX6-204ENST00000555541 IQCA1LA6NCM1 817 aa5.97□□□□□ -1.45
SNX6-204ENST00000555541 MAN2B1O00754 1011 aa5.97□□□□□ -1.45
SNX6-204ENST00000555541 ADCY3O60266 1144 aa5.97□□□□□ -1.45
SNX6-204ENST00000555541 TCF3P15923 654 aa5.97□□□□□ -1.45
SNX6-204ENST00000555541 PTPN1P18031 435 aaKnown RBP5.97□□□□□ -1.45
SNX6-204ENST00000555541 CR2P20023 1033 aa5.97□□□□□ -1.45
SNX6-204ENST00000555541 ACRV1P26436 265 aa5.97□□□□□ -1.45
SNX6-204ENST00000555541 IFRD2Q12894 506 aaPredicted RBP5.97□□□□□ -1.45
SNX6-204ENST00000555541 NFYCQ13952 458 aa5.97□□□□□ -1.45
SNX6-204ENST00000555541 LARP4Q71RC2 724 aaKnown RBP eCLIP5.97□□□□□ -1.45
SNX6-204ENST00000555541 POLNQ7Z5Q5 900 aa5.97□□□□□ -1.45
SNX6-204ENST00000555541 IFNL2Q8IZJ0 200 aa5.97□□□□□ -1.45
SNX6-204ENST00000555541 ZG16BQ96DA0 208 aa5.97□□□□□ -1.45
SNX6-204ENST00000555541 ZDHHC5Q9C0B5 715 aa5.97□□□□□ -1.45
SNX6-204ENST00000555541 ZNF703Q9H7S9 590 aaPredicted RBP5.97□□□□□ -1.45
SNX6-204ENST00000555541 MMRN2Q9H8L6 949 aa5.97□□□□□ -1.45
SNX6-204ENST00000555541 BTBD7Q9P203 1132 aa5.97□□□□□ -1.45
SNX6-204ENST00000555541 OAZ3Q9UMX2 235 aa5.97□□□□□ -1.45
SNX6-204ENST00000555541 SRPK3Q9UPE1 567 aa5.97□□□□□ -1.45
SNX6-204ENST00000555541 MPIG6BO95866 241 aa5.96□□□□□ -1.46
SNX6-204ENST00000555541 C6orf222P0C671 652 aaPredicted RBP5.96□□□□□ -1.46
SNX6-204ENST00000555541 DNAJA1P31689 397 aaKnown RBP5.96□□□□□ -1.46
SNX6-204ENST00000555541 ETV4P43268 484 aa5.96□□□□□ -1.46
SNX6-204ENST00000555541 RAC3P60763 192 aa5.96□□□□□ -1.46
SNX6-204ENST00000555541 IL13RA1P78552 427 aa5.96□□□□□ -1.46
SNX6-204ENST00000555541 RAB33AQ14088 237 aa5.96□□□□□ -1.46
SNX6-204ENST00000555541 STILQ15468 1287 aa5.96□□□□□ -1.46
SNX6-204ENST00000555541 ARHGAP36Q6ZRI8 547 aa5.96□□□□□ -1.46
SNX6-204ENST00000555541 PCDH19Q8TAB3 1148 aa5.96□□□□□ -1.46
SNX6-204ENST00000555541 PLEKHG4BQ96PX9 1271 aa5.96□□□□□ -1.46
SNX6-204ENST00000555541 CRAMP1Q96RY5 1269 aa5.96□□□□□ -1.46
SNX6-204ENST00000555541 DPYSL5Q9BPU6 564 aa5.96□□□□□ -1.46
SNX6-204ENST00000555541 MSRB2Q9Y3D2 182 aa5.96□□□□□ -1.46
SNX6-204ENST00000555541 C4BPAP04003 597 aaKnown RBP5.95□□□□□ -1.46
SNX6-204ENST00000555541 TUBA3CQ13748 450 aa5.95□□□□□ -1.46
SNX6-204ENST00000555541 GPR19Q15760 415 aa5.95□□□□□ -1.46
SNX6-204ENST00000555541 FOXB2Q5VYV0 432 aa5.95□□□□□ -1.46
SNX6-204ENST00000555541 TRIM68Q6AZZ1 485 aa5.95□□□□□ -1.46
SNX6-204ENST00000555541 TUBA3EQ6PEY2 450 aa5.95□□□□□ -1.46
SNX6-204ENST00000555541 SPATC1Q76KD6 591 aa5.95□□□□□ -1.46
SNX6-204ENST00000555541 MRGPRGQ86SM5 289 aa5.95□□□□□ -1.46
SNX6-204ENST00000555541 OSTM1Q86WC4 334 aa5.95□□□□□ -1.46
SNX6-204ENST00000555541 ZNF669Q96BR6 464 aaPredicted RBP5.95□□□□□ -1.46
SNX6-204ENST00000555541 WNK4Q96J92 1243 aa5.95□□□□□ -1.46
SNX6-204ENST00000555541 CBLCQ9ULV8 474 aa5.95□□□□□ -1.46
SNX6-204ENST00000555541 FBLP22087 321 aaKnown RBP5.94□□□□□ -1.46
SNX6-204ENST00000555541 IL12RB1P42701 662 aa5.94□□□□□ -1.46
SNX6-204ENST00000555541 RRADP55042 308 aa5.94□□□□□ -1.46
SNX6-204ENST00000555541 EIF4HQ15056 248 aaKnown RBP5.94□□□□□ -1.46
SNX6-204ENST00000555541 SEC23AQ15436 765 aa5.94□□□□□ -1.46
SNX6-204ENST00000555541 DPY19L2P1Q6NXN4 242 aa5.94□□□□□ -1.46
SNX6-204ENST00000555541 DPP8Q6V1X1 898 aaPredicted RBP5.94□□□□□ -1.46
SNX6-204ENST00000555541 NLGN4XQ8N0W4 816 aa5.94□□□□□ -1.46
SNX6-204ENST00000555541 LRRC47Q8N1G4 583 aaKnown RBP5.94□□□□□ -1.46
SNX6-204ENST00000555541 SCYL1Q96KG9 808 aa5.94□□□□□ -1.46
SNX6-204ENST00000555541 SPATA9Q9BWV2 254 aa5.94□□□□□ -1.46
SNX6-204ENST00000555541 AMNQ9BXJ7 453 aa5.94□□□□□ -1.46
SNX6-204ENST00000555541 GALNT8Q9NY28 637 aa5.94□□□□□ -1.46
SNX6-204ENST00000555541 CEP72Q9P209 647 aa5.94□□□□□ -1.46
SNX6-204ENST00000555541 R3HCC1Q9Y3T6 440 aaKnown RBP5.94□□□□□ -1.46
SNX6-204ENST00000555541 ARVCFO00192 962 aa5.93□□□□□ -1.46
SNX6-204ENST00000555541 PYGMP11217 842 aa5.93□□□□□ -1.46
SNX6-204ENST00000555541 PDE6AP16499 860 aa5.93□□□□□ -1.46
SNX6-204ENST00000555541 AOAHP28039 575 aa5.93□□□□□ -1.46
SNX6-204ENST00000555541 MC4RP32245 332 aa5.93□□□□□ -1.46
SNX6-204ENST00000555541 JAM2P57087 298 aa5.93□□□□□ -1.46
SNX6-204ENST00000555541 FOXL1Q12952 345 aa5.93□□□□□ -1.46
SNX6-204ENST00000555541 PAK1Q13153 545 aa5.93□□□□□ -1.46
SNX6-204ENST00000555541 ZMAT1Q5H9K5 638 aa5.93□□□□□ -1.46
SNX6-204ENST00000555541 C16orf59Q7L2K0 433 aa5.93□□□□□ -1.46
SNX6-204ENST00000555541 CXXC5Q7LFL8 322 aaKnown RBP5.93□□□□□ -1.46
SNX6-204ENST00000555541 PTRH1Q86Y79 214 aaKnown RBP5.93□□□□□ -1.46
SNX6-204ENST00000555541 ULK2Q8IYT8 1036 aa5.93□□□□□ -1.46
SNX6-204ENST00000555541 ZNF808Q8N4W9 903 aaPredicted RBP5.93□□□□□ -1.46
SNX6-204ENST00000555541 ZNF483Q8TF39 744 aaPredicted RBP5.93□□□□□ -1.46
SNX6-204ENST00000555541 ALG1Q9BT22 464 aa5.93□□□□□ -1.46
SNX6-204ENST00000555541 PLA2G12BQ9BX93 195 aa5.93□□□□□ -1.46
SNX6-204ENST00000555541 RIC8BQ9NVN3 520 aa5.93□□□□□ -1.46
SNX6-204ENST00000555541 PCDHA8Q9Y5H6 950 aa5.93□□□□□ -1.46
SNX6-204ENST00000555541 ZNF561-AS1K7EIQ3 104 aa5.92□□□□□ -1.46
SNX6-204ENST00000555541 ARHGAP6O43182 974 aa5.92□□□□□ -1.46
SNX6-204ENST00000555541 PPFIA2O75334 1257 aa5.92□□□□□ -1.46
SNX6-204ENST00000555541 ADH4P08319 380 aa5.92□□□□□ -1.46
SNX6-204ENST00000555541 PTGS1P23219 599 aa5.92□□□□□ -1.46
SNX6-204ENST00000555541 KANK2Q63ZY3 851 aa5.92□□□□□ -1.46
SNX6-204ENST00000555541 MAMDC2Q7Z304 686 aaPredicted RBP5.92□□□□□ -1.46
SNX6-204ENST00000555541 PTPRN2Q92932 1015 aa5.92□□□□□ -1.46
SNX6-204ENST00000555541 NAF1Q96HR8 494 aaKnown RBP5.92□□□□□ -1.46
SNX6-204ENST00000555541 KIAA1683Q9H0B3 1180 aa5.92□□□□□ -1.46
SNX6-204ENST00000555541 SMURF1Q9HCE7 757 aa5.92□□□□□ -1.46
SNX6-204ENST00000555541 INCENPQ9NQS7 918 aa5.92□□□□□ -1.46
SNX6-204ENST00000555541 NR2E1Q9Y466 385 aa5.92□□□□□ -1.46
SNX6-204ENST00000555541 CDC14BO60729 498 aa5.91□□□□□ -1.46
SNX6-204ENST00000555541 LACTBP83111 547 aaPredicted RBP5.91□□□□□ -1.46
SNX6-204ENST00000555541 WDR72Q3MJ13 1102 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms