RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 PLS1Q14651 629 aa16.04■□□□□ 0.16
IFT43-209ENST00000555305 NFIL3Q16649 462 aa16.04■□□□□ 0.16
IFT43-209ENST00000555305 CCDC40Q4G0X9 1142 aa16.04■□□□□ 0.16
IFT43-209ENST00000555305 RIOX2Q8IUF8 465 aa16.04■□□□□ 0.16
IFT43-209ENST00000555305 GOLGA5Q8TBA6 731 aa16.04■□□□□ 0.16
IFT43-209ENST00000555305 CPLX3Q8WVH0 158 aa16.04■□□□□ 0.16
IFT43-209ENST00000555305 WNK4Q96J92 1243 aa16.04■□□□□ 0.16
IFT43-209ENST00000555305 CCDC43Q96MW1 224 aaKnown RBP16.04■□□□□ 0.16
IFT43-209ENST00000555305 DNAJC7Q99615 494 aa16.04■□□□□ 0.16
IFT43-209ENST00000555305 EDEM3Q9BZQ6 932 aa16.04■□□□□ 0.16
IFT43-209ENST00000555305 A1CFQ9NQ94 594 aaKnown RBP16.04■□□□□ 0.16
IFT43-209ENST00000555305 KCNH4Q9UQ05 1017 aa16.04■□□□□ 0.16
IFT43-209ENST00000555305 RLFQ13129 1914 aa16.03■□□□□ 0.16
IFT43-209ENST00000555305 SMCHD1A6NHR9 2005 aa16.03■□□□□ 0.16
IFT43-209ENST00000555305 FXR1P51114 621 aaKnown RBP eCLIP16.03■□□□□ 0.16
IFT43-209ENST00000555305 IRX3P78415 501 aaPredicted RBP16.03■□□□□ 0.16
IFT43-209ENST00000555305 RAD51AP2Q09MP3 1159 aa16.03■□□□□ 0.16
IFT43-209ENST00000555305 ADAM9Q13443 819 aa16.03■□□□□ 0.16
IFT43-209ENST00000555305 MYCT1Q8N699 235 aa16.03■□□□□ 0.16
IFT43-209ENST00000555305 MYRIPQ8NFW9 859 aa16.03■□□□□ 0.16
IFT43-209ENST00000555305 METTL14Q9HCE5 456 aaKnown RBP16.03■□□□□ 0.16
IFT43-209ENST00000555305 ANKEF1Q9NU02 776 aa16.03■□□□□ 0.16
IFT43-209ENST00000555305 TBC1D7Q9P0N9 293 aa16.03■□□□□ 0.16
IFT43-209ENST00000555305 LARSQ9P2J5 1176 aaKnown RBP16.03■□□□□ 0.16
IFT43-209ENST00000555305 PPP2R2CQ9Y2T4 447 aa16.03■□□□□ 0.16
IFT43-209ENST00000555305 PCDHB13Q9Y5F0 798 aa16.03■□□□□ 0.16
IFT43-209ENST00000555305 USP27XA6NNY8 438 aa16.03■□□□□ 0.16
IFT43-209ENST00000555305 IRF6O14896 467 aa16.03■□□□□ 0.16
IFT43-209ENST00000555305 SLC16A3O15427 465 aaKnown RBP16.03■□□□□ 0.16
IFT43-209ENST00000555305 GCNT3O95395 438 aa16.03■□□□□ 0.16
IFT43-209ENST00000555305 SLC25A27O95847 323 aa16.03■□□□□ 0.16
IFT43-209ENST00000555305 ZBED6P86452 979 aa16.03■□□□□ 0.16
IFT43-209ENST00000555305 CACNB1Q02641 598 aaPredicted RBP16.03■□□□□ 0.16
IFT43-209ENST00000555305 TTLL12Q14166 644 aaPredicted RBP16.03■□□□□ 0.16
IFT43-209ENST00000555305 PTPN21Q16825 1174 aa16.03■□□□□ 0.16
IFT43-209ENST00000555305 FRMD5Q7Z6J6 570 aa16.03■□□□□ 0.16
IFT43-209ENST00000555305 PCMTD1Q96MG8 357 aaPredicted RBP16.03■□□□□ 0.16
IFT43-209ENST00000555305 NUCKS1Q9H1E3 243 aaKnown RBP16.03■□□□□ 0.16
IFT43-209ENST00000555305 AGTPBP1Q9UPW5 1226 aa16.03■□□□□ 0.16
IFT43-209ENST00000555305 DDX39AO00148 427 aaKnown RBP16.02■□□□□ 0.15
IFT43-209ENST00000555305 GTF2F1P35269 517 aaKnown RBP eCLIP16.02■□□□□ 0.15
IFT43-209ENST00000555305 SYCP1Q15431 976 aa16.02■□□□□ 0.15
IFT43-209ENST00000555305 STXBP2Q15833 593 aa16.02■□□□□ 0.15
IFT43-209ENST00000555305 PADI6Q6TGC4 694 aa16.02■□□□□ 0.15
IFT43-209ENST00000555305 OTUD6AQ7L8S5 288 aa16.02■□□□□ 0.15
IFT43-209ENST00000555305 FAM178BQ8IXR5 827 aa16.02■□□□□ 0.15
IFT43-209ENST00000555305 BANK1Q8NDB2 785 aa16.02■□□□□ 0.15
IFT43-209ENST00000555305 GTF3C2Q8WUA4 911 aaPredicted RBP16.02■□□□□ 0.15
IFT43-209ENST00000555305 ATP6V0A1Q93050 837 aa16.02■□□□□ 0.15
IFT43-209ENST00000555305 MOV10L1Q9BXT6 1211 aaKnown RBP16.02■□□□□ 0.15
IFT43-209ENST00000555305 ELP3Q9H9T3 547 aa16.02■□□□□ 0.15
IFT43-209ENST00000555305 CGNQ9P2M7 1197 aaKnown RBP16.02■□□□□ 0.15
IFT43-209ENST00000555305 PCDHA10Q9Y5I2 948 aa16.02■□□□□ 0.15
IFT43-209ENST00000555305 WDR90Q96KV7 1748 aa16.01■□□□□ 0.15
IFT43-209ENST00000555305 TTC26A0AVF1 554 aa16.01■□□□□ 0.15
IFT43-209ENST00000555305 EIF3JO75822 258 aaKnown RBP16.01■□□□□ 0.15
IFT43-209ENST00000555305 OSBPP22059 807 aa16.01■□□□□ 0.15
IFT43-209ENST00000555305 NR2F2P24468 414 aa16.01■□□□□ 0.15
IFT43-209ENST00000555305 CDK17Q00537 523 aa16.01■□□□□ 0.15
IFT43-209ENST00000555305 GPR162Q16538 588 aa16.01■□□□□ 0.15
IFT43-209ENST00000555305 GADL1Q6ZQY3 521 aa16.01■□□□□ 0.15
IFT43-209ENST00000555305 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.01■□□□□ 0.15
IFT43-209ENST00000555305 HS2ST1Q7LGA3 356 aa16.01■□□□□ 0.15
IFT43-209ENST00000555305 NELFCDQ8IXH7 590 aa16.01■□□□□ 0.15
IFT43-209ENST00000555305 ANKRD35Q8N283 1001 aa16.01■□□□□ 0.15
IFT43-209ENST00000555305 GLIS3Q8NEA6 775 aa16.01■□□□□ 0.15
IFT43-209ENST00000555305 OTUD5Q96G74 571 aa16.01■□□□□ 0.15
IFT43-209ENST00000555305 DRC1Q96MC2 740 aa16.01■□□□□ 0.15
IFT43-209ENST00000555305 TTYH3Q9C0H2 523 aa16.01■□□□□ 0.15
IFT43-209ENST00000555305 KCNG1Q9UIX4 513 aa16.01■□□□□ 0.15
IFT43-209ENST00000555305 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.01■□□□□ 0.15
IFT43-209ENST00000555305 LOC285556D6RIA3 1793 aa16.01■□□□□ 0.15
IFT43-209ENST00000555305 PHLPP2Q6ZVD8 1323 aa16.01■□□□□ 0.15
IFT43-209ENST00000555305 PSAPP07602 524 aa16■□□□□ 0.15
IFT43-209ENST00000555305 YWHABP31946 246 aaKnown RBP16■□□□□ 0.15
IFT43-209ENST00000555305 ICAM3P32942 547 aa16■□□□□ 0.15
IFT43-209ENST00000555305 ABCD1P33897 745 aa16■□□□□ 0.15
IFT43-209ENST00000555305 SNRPFP62306 86 aaKnown RBP16■□□□□ 0.15
IFT43-209ENST00000555305 ETF1P62495 437 aaKnown RBP16■□□□□ 0.15
IFT43-209ENST00000555305 GOLGA8FQ08AF8 430 aa16■□□□□ 0.15
IFT43-209ENST00000555305 GOLGA8DPQ0D2H9 430 aa16■□□□□ 0.15
IFT43-209ENST00000555305 MYBPC2Q14324 1141 aa16■□□□□ 0.15
IFT43-209ENST00000555305 ODR4Q5SWX8 454 aa16■□□□□ 0.15
IFT43-209ENST00000555305 TREML2Q5T2D2 321 aa16■□□□□ 0.15
IFT43-209ENST00000555305 ZNF720Q7Z2F6 126 aa16■□□□□ 0.15
IFT43-209ENST00000555305 TAF1DQ9H5J8 278 aaPredicted RBP16■□□□□ 0.15
IFT43-209ENST00000555305 PKD2L1Q9P0L9 805 aa16■□□□□ 0.15
IFT43-209ENST00000555305 SCN4AP35499 1836 aa16■□□□□ 0.15
IFT43-209ENST00000555305 A0A0G2JMZ2 1700 aa16■□□□□ 0.15
IFT43-209ENST00000555305 SPATA31C2B4DYI2 1134 aa16■□□□□ 0.15
IFT43-209ENST00000555305 DYNC1I1O14576 645 aa16■□□□□ 0.15
IFT43-209ENST00000555305 RARRES1P49788 294 aa16■□□□□ 0.15
IFT43-209ENST00000555305 MEA1Q16626 185 aa16■□□□□ 0.15
IFT43-209ENST00000555305 TRIM59Q8IWR1 403 aa16■□□□□ 0.15
IFT43-209ENST00000555305 CCDC170Q8IYT3 715 aa16■□□□□ 0.15
IFT43-209ENST00000555305 TMEM174Q8WUU8 243 aa16■□□□□ 0.15
IFT43-209ENST00000555305 ZFP91Q96JP5 570 aaPredicted RBP16■□□□□ 0.15
IFT43-209ENST00000555305 MKNK1Q9BUB5 465 aa16■□□□□ 0.15
IFT43-209ENST00000555305 SPATC1LQ9H0A9 340 aa16■□□□□ 0.15
IFT43-209ENST00000555305 TMEM206Q9H813 350 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms