RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 PRKD1Q15139 912 aaPredicted RBP7.75□□□□□ -1.17
VRK1-203ENST00000555067 TCTN3Q6NUS6 607 aa7.75□□□□□ -1.17
VRK1-203ENST00000555067 DPP8Q6V1X1 898 aaPredicted RBP7.75□□□□□ -1.17
VRK1-203ENST00000555067 CATSPERZQ9NTU4 200 aa7.75□□□□□ -1.17
VRK1-203ENST00000555067 RIC8BQ9NVN3 520 aa7.75□□□□□ -1.17
VRK1-203ENST00000555067 ARHGAP28Q9P2N2 729 aa7.75□□□□□ -1.17
VRK1-203ENST00000555067 ATP23Q9Y6H3 246 aa7.75□□□□□ -1.17
VRK1-203ENST00000555067 WDR33Q9C0J8 1336 aaKnown RBP7.75□□□□□ -1.17
VRK1-203ENST00000555067 ST5P78524 1137 aa7.74□□□□□ -1.17
VRK1-203ENST00000555067 USP10Q14694 798 aaKnown RBP7.74□□□□□ -1.17
VRK1-203ENST00000555067 HS1BP3Q53T59 392 aa7.74□□□□□ -1.17
VRK1-203ENST00000555067 FAM47CQ5HY64 1035 aa7.74□□□□□ -1.17
VRK1-203ENST00000555067 FAM209AQ5JX71 171 aa7.74□□□□□ -1.17
VRK1-203ENST00000555067 EP400NLQ6ZTU2 488 aa7.74□□□□□ -1.17
VRK1-203ENST00000555067 C16orf59Q7L2K0 433 aa7.74□□□□□ -1.17
VRK1-203ENST00000555067 GPR155Q7Z3F1 870 aa7.74□□□□□ -1.17
VRK1-203ENST00000555067 PCDH19Q8TAB3 1148 aa7.74□□□□□ -1.17
VRK1-203ENST00000555067 ARMC5Q96C12 935 aa7.74□□□□□ -1.17
VRK1-203ENST00000555067 DRC1Q96MC2 740 aa7.74□□□□□ -1.17
VRK1-203ENST00000555067 HIRIP3Q9BW71 556 aaPredicted RBP7.74□□□□□ -1.17
VRK1-203ENST00000555067 CARD11Q9BXL7 1154 aa7.74□□□□□ -1.17
VRK1-203ENST00000555067 SLC39A2Q9NP94 309 aa7.74□□□□□ -1.17
VRK1-203ENST00000555067 PCDHA8Q9Y5H6 950 aa7.74□□□□□ -1.17
VRK1-203ENST00000555067 POLD1P28340 1107 aa7.73□□□□□ -1.17
VRK1-203ENST00000555067 ZC3H12BQ5HYM0 836 aaKnown RBP7.73□□□□□ -1.17
VRK1-203ENST00000555067 FOXB2Q5VYV0 432 aa7.73□□□□□ -1.17
VRK1-203ENST00000555067 EXOC2Q96KP1 924 aa7.73□□□□□ -1.17
VRK1-203ENST00000555067 LMF1Q96S06 567 aa7.73□□□□□ -1.17
VRK1-203ENST00000555067 DHRS4Q9BTZ2 278 aa7.73□□□□□ -1.17
VRK1-203ENST00000555067 FAM90A27PA6NNH2 459 aa7.72□□□□□ -1.17
VRK1-203ENST00000555067 MAN2B1O00754 1011 aa7.72□□□□□ -1.17
VRK1-203ENST00000555067 DIAPH1O60610 1272 aaKnown RBP7.72□□□□□ -1.17
VRK1-203ENST00000555067 APPP05067 770 aa7.72□□□□□ -1.17
VRK1-203ENST00000555067 PYGMP11217 842 aa7.72□□□□□ -1.17
VRK1-203ENST00000555067 PDE6AP16499 860 aa7.72□□□□□ -1.17
VRK1-203ENST00000555067 ABHD18Q0P651 414 aa7.72□□□□□ -1.17
VRK1-203ENST00000555067 TOP3AQ13472 1001 aaPredicted RBP7.72□□□□□ -1.17
VRK1-203ENST00000555067 CRY1Q16526 586 aa7.72□□□□□ -1.17
VRK1-203ENST00000555067 LRP10Q7Z4F1 713 aa7.72□□□□□ -1.17
VRK1-203ENST00000555067 C8orf37Q96NL8 207 aa7.72□□□□□ -1.17
VRK1-203ENST00000555067 GNRHR2Q96P88 292 aa7.72□□□□□ -1.17
VRK1-203ENST00000555067 MRPS23Q9Y3D9 190 aaKnown RBP7.72□□□□□ -1.17
VRK1-203ENST00000555067 PCSK5Q92824 1860 aa7.72□□□□□ -1.17
VRK1-203ENST00000555067 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.71□□□□□ -1.18
VRK1-203ENST00000555067 ZNF561-AS1K7EIQ3 104 aa7.71□□□□□ -1.18
VRK1-203ENST00000555067 NARSO43776 548 aaKnown RBP7.71□□□□□ -1.18
VRK1-203ENST00000555067 AMY2AP04746 511 aa7.71□□□□□ -1.18
VRK1-203ENST00000555067 AMY2BP19961 511 aa7.71□□□□□ -1.18
VRK1-203ENST00000555067 PTGS1P23219 599 aa7.71□□□□□ -1.18
VRK1-203ENST00000555067 DPTQ07507 201 aa7.71□□□□□ -1.18
VRK1-203ENST00000555067 ZMAT1Q5H9K5 638 aa7.71□□□□□ -1.18
VRK1-203ENST00000555067 PTRH1Q86Y79 214 aaKnown RBP7.71□□□□□ -1.18
VRK1-203ENST00000555067 EDAQ92838 391 aa7.71□□□□□ -1.18
VRK1-203ENST00000555067 FBXO10Q9UK96 956 aa7.71□□□□□ -1.18
VRK1-203ENST00000555067 CBLCQ9ULV8 474 aa7.71□□□□□ -1.18
VRK1-203ENST00000555067 CLASP2O75122 1294 aaKnown RBP7.7□□□□□ -1.18
VRK1-203ENST00000555067 ZNF202O95125 648 aa7.7□□□□□ -1.18
VRK1-203ENST00000555067 FAM153BP0C7A2 387 aa7.7□□□□□ -1.18
VRK1-203ENST00000555067 ZNF888P0CJ79 500 aaPredicted RBP7.7□□□□□ -1.18
VRK1-203ENST00000555067 KRT15P19012 456 aa7.7□□□□□ -1.18
VRK1-203ENST00000555067 AOAHP28039 575 aa7.7□□□□□ -1.18
VRK1-203ENST00000555067 ETV4P43268 484 aa7.7□□□□□ -1.18
VRK1-203ENST00000555067 HERVK_113P62684 666 aa7.7□□□□□ -1.18
VRK1-203ENST00000555067 RASA3Q14644 834 aa7.7□□□□□ -1.18
VRK1-203ENST00000555067 OSTM1Q86WC4 334 aa7.7□□□□□ -1.18
VRK1-203ENST00000555067 ZC3H7AQ8IWR0 971 aaKnown RBP7.7□□□□□ -1.18
VRK1-203ENST00000555067 SREK1Q8WXA9 508 aaKnown RBP7.7□□□□□ -1.18
VRK1-203ENST00000555067 LRRC37BQ96QE4 947 aa7.7□□□□□ -1.18
VRK1-203ENST00000555067 CEP89Q96ST8 783 aa7.7□□□□□ -1.18
VRK1-203ENST00000555067 IKZF4Q9H2S9 585 aa7.7□□□□□ -1.18
VRK1-203ENST00000555067 INCENPQ9NQS7 918 aa7.7□□□□□ -1.18
VRK1-203ENST00000555067 KDM2BQ8NHM5 1336 aa7.7□□□□□ -1.18
VRK1-203ENST00000555067 ESYT3A0FGR9 886 aa7.69□□□□□ -1.18
VRK1-203ENST00000555067 CCDC66A2RUB6 948 aa7.69□□□□□ -1.18
VRK1-203ENST00000555067 PRAMEF25A6NGN4 478 aa7.69□□□□□ -1.18
VRK1-203ENST00000555067 EFCAB14O75071 495 aa7.69□□□□□ -1.18
VRK1-203ENST00000555067 SRGAP2CP0DJJ0 459 aa7.69□□□□□ -1.18
VRK1-203ENST00000555067 JAM2P57087 298 aa7.69□□□□□ -1.18
VRK1-203ENST00000555067 RAC3P60763 192 aa7.69□□□□□ -1.18
VRK1-203ENST00000555067 SERINC3Q13530 473 aa7.69□□□□□ -1.18
VRK1-203ENST00000555067 WDR72Q3MJ13 1102 aa7.69□□□□□ -1.18
VRK1-203ENST00000555067 CXXC5Q7LFL8 322 aaKnown RBP7.69□□□□□ -1.18
VRK1-203ENST00000555067 GIMAP8Q8ND71 665 aaPredicted RBP7.69□□□□□ -1.18
VRK1-203ENST00000555067 SCYL1Q96KG9 808 aa7.69□□□□□ -1.18
VRK1-203ENST00000555067 DEPDC7Q96QD5 511 aa7.69□□□□□ -1.18
VRK1-203ENST00000555067 ADOQ96SZ5 270 aa7.69□□□□□ -1.18
VRK1-203ENST00000555067 ZFR2Q9UPR6 939 aaKnown RBP7.69□□□□□ -1.18
VRK1-203ENST00000555067 PCDHA9Q9Y5H5 950 aa7.69□□□□□ -1.18
VRK1-203ENST00000555067 PLSCR1O15162 318 aa7.68□□□□□ -1.18
VRK1-203ENST00000555067 CRTAMO95727 393 aa7.68□□□□□ -1.18
VRK1-203ENST00000555067 GTF2F1P35269 517 aaKnown RBP eCLIP7.68□□□□□ -1.18
VRK1-203ENST00000555067 LACTBP83111 547 aaPredicted RBP7.68□□□□□ -1.18
VRK1-203ENST00000555067 NRN1LQ496H8 165 aa7.68□□□□□ -1.18
VRK1-203ENST00000555067 USP39Q53GS9 565 aaKnown RBP7.68□□□□□ -1.18
VRK1-203ENST00000555067 NEIL1Q96FI4 390 aaPredicted RBP7.68□□□□□ -1.18
VRK1-203ENST00000555067 SMURF1Q9HCE7 757 aa7.68□□□□□ -1.18
VRK1-203ENST00000555067 GALNT8Q9NY28 637 aa7.68□□□□□ -1.18
VRK1-203ENST00000555067 PTPN22Q9Y2R2 807 aa7.68□□□□□ -1.18
VRK1-203ENST00000555067 PPM1GO15355 546 aaPredicted RBP7.67□□□□□ -1.18
VRK1-203ENST00000555067 C4BPAP04003 597 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms