RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 MYADML2A6NDP7 307 aa19.35■□□□□ 0.69
SHOX-204ENST00000554971 ADAMTS4O75173 837 aa19.35■□□□□ 0.69
SHOX-204ENST00000554971 PRR29P0C7W0 189 aa19.35■□□□□ 0.69
SHOX-204ENST00000554971 ARHGAP1Q07960 439 aa19.35■□□□□ 0.69
SHOX-204ENST00000554971 Q4G0T1 1027 aa19.35■□□□□ 0.69
SHOX-204ENST00000554971 SPECC1LQ69YQ0 1117 aa19.35■□□□□ 0.69
SHOX-204ENST00000554971 NLRX1Q86UT6 975 aa19.35■□□□□ 0.69
SHOX-204ENST00000554971 TNS4Q8IZW8 715 aa19.35■□□□□ 0.69
SHOX-204ENST00000554971 U2AF1L4Q8WU68 220 aaKnown RBP19.35■□□□□ 0.69
SHOX-204ENST00000554971 SYMPKQ92797 1274 aaKnown RBP19.35■□□□□ 0.69
SHOX-204ENST00000554971 TRMT1Q9NXH9 659 aaKnown RBP19.35■□□□□ 0.69
SHOX-204ENST00000554971 PKD2L1Q9P0L9 805 aa19.35■□□□□ 0.69
SHOX-204ENST00000554971 CGNQ9P2M7 1197 aaKnown RBP19.35■□□□□ 0.69
SHOX-204ENST00000554971 LAMA2P24043 3122 aaKnown RBP19.34■□□□□ 0.69
SHOX-204ENST00000554971 RANBP2P49792 3224 aaKnown RBP19.34■□□□□ 0.69
SHOX-204ENST00000554971 MSH4O15457 936 aa19.34■□□□□ 0.69
SHOX-204ENST00000554971 STX10O60499 249 aa19.34■□□□□ 0.69
SHOX-204ENST00000554971 SORBS3O60504 671 aa19.34■□□□□ 0.69
SHOX-204ENST00000554971 PGK1P00558 417 aa19.34■□□□□ 0.69
SHOX-204ENST00000554971 RARBP10826 455 aa19.34■□□□□ 0.69
SHOX-204ENST00000554971 LONP1P36776 959 aaKnown RBP19.34■□□□□ 0.69
SHOX-204ENST00000554971 DPYDQ12882 1025 aa19.34■□□□□ 0.69
SHOX-204ENST00000554971 PTGDRQ13258 359 aa19.34■□□□□ 0.69
SHOX-204ENST00000554971 TLK2Q86UE8 772 aa19.34■□□□□ 0.69
SHOX-204ENST00000554971 POTEDQ86YR6 584 aa19.34■□□□□ 0.69
SHOX-204ENST00000554971 ZNF592Q92610 1267 aa19.34■□□□□ 0.69
SHOX-204ENST00000554971 DHX58Q96C10 678 aa19.34■□□□□ 0.69
SHOX-204ENST00000554971 CRISPLD2Q9H0B8 497 aa19.34■□□□□ 0.69
SHOX-204ENST00000554971 L2HGDHQ9H9P8 463 aa19.34■□□□□ 0.69
SHOX-204ENST00000554971 AGO4Q9HCK5 861 aaKnown RBP19.34■□□□□ 0.69
SHOX-204ENST00000554971 MAFGO15525 162 aa19.33■□□□□ 0.69
SHOX-204ENST00000554971 DHX15O43143 795 aaKnown RBP19.33■□□□□ 0.69
SHOX-204ENST00000554971 MSCO60682 206 aa19.33■□□□□ 0.69
SHOX-204ENST00000554971 NCBP1Q09161 790 aaKnown RBP19.33■□□□□ 0.69
SHOX-204ENST00000554971 USP49Q70CQ1 688 aa19.33■□□□□ 0.69
SHOX-204ENST00000554971 PDILTQ8N807 584 aa19.33■□□□□ 0.69
SHOX-204ENST00000554971 ETNPPLQ8TBG4 499 aa19.33■□□□□ 0.69
SHOX-204ENST00000554971 TSC1Q92574 1164 aa19.33■□□□□ 0.69
SHOX-204ENST00000554971 SENP7Q9BQF6 1050 aa19.33■□□□□ 0.69
SHOX-204ENST00000554971 DDX25Q9UHL0 483 aaKnown RBP19.33■□□□□ 0.69
SHOX-204ENST00000554971 CEP290O15078 2479 aa19.33■□□□□ 0.69
SHOX-204ENST00000554971 SGPL1O95470 568 aa19.33■□□□□ 0.68
SHOX-204ENST00000554971 GGPS1O95749 300 aa19.33■□□□□ 0.68
SHOX-204ENST00000554971 GJA8P48165 433 aa19.33■□□□□ 0.68
SHOX-204ENST00000554971 SETQ01105 290 aaPredicted RBP19.33■□□□□ 0.68
SHOX-204ENST00000554971 ZNF174Q15697 407 aa19.33■□□□□ 0.68
SHOX-204ENST00000554971 KCNV1Q6PIU1 500 aa19.33■□□□□ 0.68
SHOX-204ENST00000554971 CYFIP1Q7L576 1253 aa19.33■□□□□ 0.68
SHOX-204ENST00000554971 EPSTI1Q96J88 318 aa19.33■□□□□ 0.68
SHOX-204ENST00000554971 CDHR1Q96JP9 859 aa19.33■□□□□ 0.68
SHOX-204ENST00000554971 KCNMB3Q9NPA1 279 aa19.33■□□□□ 0.68
SHOX-204ENST00000554971 XPNPEP3Q9NQH7 507 aa19.33■□□□□ 0.68
SHOX-204ENST00000554971 OGDHLQ9ULD0 1010 aa19.33■□□□□ 0.68
SHOX-204ENST00000554971 A0A1B0GTH6 734 aa19.32■□□□□ 0.68
SHOX-204ENST00000554971 IPO5O00410 1097 aaKnown RBP19.32■□□□□ 0.68
SHOX-204ENST00000554971 DYNC1LI2O43237 492 aaPredicted RBP19.32■□□□□ 0.68
SHOX-204ENST00000554971 FARP2O94887 1054 aaPredicted RBP19.32■□□□□ 0.68
SHOX-204ENST00000554971 MNX1P50219 401 aaPredicted RBP19.32■□□□□ 0.68
SHOX-204ENST00000554971 GJA9P57773 515 aa19.32■□□□□ 0.68
SHOX-204ENST00000554971 NR1I3Q14994 352 aa19.32■□□□□ 0.68
SHOX-204ENST00000554971 HSDL1Q3SXM5 330 aa19.32■□□□□ 0.68
SHOX-204ENST00000554971 CELF3Q5SZQ8 465 aaKnown RBP19.32■□□□□ 0.68
SHOX-204ENST00000554971 HAS1Q92839 578 aa19.32■□□□□ 0.68
SHOX-204ENST00000554971 UPF3AQ9H1J1 476 aaKnown RBP19.32■□□□□ 0.68
SHOX-204ENST00000554971 PHLPP2Q6ZVD8 1323 aa19.32■□□□□ 0.68
SHOX-204ENST00000554971 LAD1O00515 517 aa19.31■□□□□ 0.68
SHOX-204ENST00000554971 NKRFO15226 690 aaKnown RBP eCLIP19.31■□□□□ 0.68
SHOX-204ENST00000554971 SLU7O95391 586 aaKnown RBP19.31■□□□□ 0.68
SHOX-204ENST00000554971 GCFC2P16383 781 aaKnown RBP19.31■□□□□ 0.68
SHOX-204ENST00000554971 ETF1P62495 437 aaKnown RBP19.31■□□□□ 0.68
SHOX-204ENST00000554971 NKX3-2P78367 333 aa19.31■□□□□ 0.68
SHOX-204ENST00000554971 EMID1Q96A84 441 aaPredicted RBP19.31■□□□□ 0.68
SHOX-204ENST00000554971 TMEM60Q9H2L4 133 aa19.31■□□□□ 0.68
SHOX-204ENST00000554971 INTS13Q9NVM9 706 aa19.31■□□□□ 0.68
SHOX-204ENST00000554971 RMND1Q9NWS8 449 aa19.31■□□□□ 0.68
SHOX-204ENST00000554971 Q9Y3F1 56 aa19.31■□□□□ 0.68
SHOX-204ENST00000554971 GTPBP6O43824 516 aaPredicted RBP19.31■□□□□ 0.68
SHOX-204ENST00000554971 MYL1P05976 194 aa19.31■□□□□ 0.68
SHOX-204ENST00000554971 MCM7P33993 719 aa19.31■□□□□ 0.68
SHOX-204ENST00000554971 TXLNAP40222 546 aa19.31■□□□□ 0.68
SHOX-204ENST00000554971 BEX3Q00994 111 aa19.31■□□□□ 0.68
SHOX-204ENST00000554971 CUL4BQ13620 913 aa19.31■□□□□ 0.68
SHOX-204ENST00000554971 E2F4Q16254 413 aa19.31■□□□□ 0.68
SHOX-204ENST00000554971 CCSAPQ6IQ19 270 aaPredicted RBP19.31■□□□□ 0.68
SHOX-204ENST00000554971 KLHDC9Q8NEP7 349 aa19.31■□□□□ 0.68
SHOX-204ENST00000554971 ZNF577Q9BSK1 485 aa19.31■□□□□ 0.68
SHOX-204ENST00000554971 SRRTQ9BXP5 876 aaKnown RBP19.31■□□□□ 0.68
SHOX-204ENST00000554971 MYH9P35579 1960 aaKnown RBP19.3■□□□□ 0.68
SHOX-204ENST00000554971 SCN10AQ9Y5Y9 1956 aa19.3■□□□□ 0.68
SHOX-204ENST00000554971 A0A087X0B3 334 aa19.3■□□□□ 0.68
SHOX-204ENST00000554971 GH1P01241 217 aa19.3■□□□□ 0.68
SHOX-204ENST00000554971 C6orf222P0C671 652 aaPredicted RBP19.3■□□□□ 0.68
SHOX-204ENST00000554971 LRRC41Q15345 812 aa19.3■□□□□ 0.68
SHOX-204ENST00000554971 METTL7BQ6UX53 244 aa19.3■□□□□ 0.68
SHOX-204ENST00000554971 C4orf32Q8N8J7 132 aa19.3■□□□□ 0.68
SHOX-204ENST00000554971 OR6J1Q8NGC5 347 aa19.3■□□□□ 0.68
SHOX-204ENST00000554971 SLC5A5Q92911 643 aa19.3■□□□□ 0.68
SHOX-204ENST00000554971 VWA3AA6NCI4 1184 aa19.29■□□□□ 0.68
SHOX-204ENST00000554971 A6NJR5 290 aa19.29■□□□□ 0.68
SHOX-204ENST00000554971 NEDD9Q14511 834 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms