RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 EDAQ92838 391 aa11.06□□□□□ -0.64
TMEM253-204ENST00000554844 PBXIP1Q96AQ6 731 aa11.06□□□□□ -0.64
TMEM253-204ENST00000554844 RC3H2Q9HBD1 1191 aaKnown RBP11.06□□□□□ -0.64
TMEM253-204ENST00000554844 SENP2Q9HC62 589 aa11.06□□□□□ -0.64
TMEM253-204ENST00000554844 JPH1Q9HDC5 661 aaPredicted RBP11.06□□□□□ -0.64
TMEM253-204ENST00000554844 RYDENQ9NUL5 291 aaKnown RBP11.06□□□□□ -0.64
TMEM253-204ENST00000554844 SLC9A2Q9UBY0 812 aa11.06□□□□□ -0.64
TMEM253-204ENST00000554844 PCDHB12Q9Y5F1 795 aa11.06□□□□□ -0.64
TMEM253-204ENST00000554844 STK24Q9Y6E0 443 aa11.06□□□□□ -0.64
TMEM253-204ENST00000554844 TTC3P53804 2025 aa11.06□□□□□ -0.64
TMEM253-204ENST00000554844 GSTTP1A0A1W2PQM5 241 aa11.05□□□□□ -0.64
TMEM253-204ENST00000554844 TMEM221A6NGB7 291 aa11.05□□□□□ -0.64
TMEM253-204ENST00000554844 M0R296 226 aa11.05□□□□□ -0.64
TMEM253-204ENST00000554844 LINC01565O15544 149 aa11.05□□□□□ -0.64
TMEM253-204ENST00000554844 ATP9AO75110 1047 aa11.05□□□□□ -0.64
TMEM253-204ENST00000554844 IGHDP01880 384 aa11.05□□□□□ -0.64
TMEM253-204ENST00000554844 ITGB1P05556 798 aa11.05□□□□□ -0.64
TMEM253-204ENST00000554844 INSRRP14616 1297 aa11.05□□□□□ -0.64
TMEM253-204ENST00000554844 GTF2F1P35269 517 aaKnown RBP eCLIP11.05□□□□□ -0.64
TMEM253-204ENST00000554844 TTC22Q5TAA0 569 aa11.05□□□□□ -0.64
TMEM253-204ENST00000554844 FAM43BQ6ZT52 329 aaPredicted RBP11.05□□□□□ -0.64
TMEM253-204ENST00000554844 RBM23Q86U06 439 aaKnown RBP11.05□□□□□ -0.64
TMEM253-204ENST00000554844 NME8Q8N427 588 aa11.05□□□□□ -0.64
TMEM253-204ENST00000554844 KLHL23Q8NBE8 558 aa11.05□□□□□ -0.64
TMEM253-204ENST00000554844 MYL10Q9BUA6 226 aa11.05□□□□□ -0.64
TMEM253-204ENST00000554844 TLE6Q9H808 572 aa11.05□□□□□ -0.64
TMEM253-204ENST00000554844 PCDHB7Q9Y5E2 793 aa11.05□□□□□ -0.64
TMEM253-204ENST00000554844 ATG2AQ2TAZ0 1938 aa11.05□□□□□ -0.64
TMEM253-204ENST00000554844 DENND3A2RUS2 1198 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 PRC1O43663 620 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 PPFIA3O75145 1194 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 EYA4O95677 639 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 LINC00271P0C7V0 271 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 ITGB5P18084 799 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 KRT76Q01546 638 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 PTH1RQ03431 593 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 UBE3AQ05086 875 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 TMEM62Q0P6H9 643 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 NFX1Q12986 1120 aaKnown RBP11.04□□□□□ -0.64
TMEM253-204ENST00000554844 COASYQ13057 564 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 UBE2SQ16763 222 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 SYNE3Q6ZMZ3 975 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 TRIM67Q6ZTA4 783 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 HEATR3Q7Z4Q2 680 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 ZBTB33Q86T24 672 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 THNSL1Q8IYQ7 743 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 SMRP1Q8NCR6 262 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 SPPL3Q8TCT6 385 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 IGDCC4Q8TDY8 1250 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 TMEM87BQ96K49 555 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 MTA3Q9BTC8 594 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 CELF4Q9BZC1 486 aaKnown RBP11.04□□□□□ -0.64
TMEM253-204ENST00000554844 IL25Q9H293 177 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 AGO3Q9H9G7 860 aaKnown RBP11.04□□□□□ -0.64
TMEM253-204ENST00000554844 LY9Q9HBG7 655 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 JADE2Q9NQC1 790 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 PADI3Q9ULW8 664 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 PCDHA6Q9UN73 950 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 GINS2Q9Y248 185 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 TELO2Q9Y4R8 837 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 PCDHA8Q9Y5H6 950 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 PCDHA2Q9Y5H9 948 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 UBIAD1Q9Y5Z9 338 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 IGSF9BQ9UPX0 1349 aa11.04□□□□□ -0.64
TMEM253-204ENST00000554844 SMIM35A0A1B0GVV1 85 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 TBKBP1A7MCY6 615 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 BACH1O14867 736 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 PLEKHA8P1O95397 391 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 CHMLP26374 656 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 MCM5P33992 734 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 SARSP49591 514 aaKnown RBP11.03□□□□□ -0.64
TMEM253-204ENST00000554844 SLC26A2P50443 739 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 STAT5BP51692 787 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 ZXDAP98168 799 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 PDAP1Q13442 181 aaKnown RBP11.03□□□□□ -0.64
TMEM253-204ENST00000554844 MARCH8Q5T0T0 291 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 FAM160B1Q5W0V3 765 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 PDE12Q6L8Q7 609 aaKnown RBP11.03□□□□□ -0.64
TMEM253-204ENST00000554844 BMP8AQ7Z5Y6 402 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 ADGRD2Q7Z7M1 963 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 MB21D2Q8IYB1 491 aaPredicted RBP11.03□□□□□ -0.64
TMEM253-204ENST00000554844 ZNF579Q8NAF0 562 aaKnown RBP11.03□□□□□ -0.64
TMEM253-204ENST00000554844 LINC01599Q8WXQ3 324 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 MSLNLQ96KJ4 702 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 RPGRIP1Q96KN7 1286 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 NEK1Q96PY6 1258 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 CDCA3Q99618 268 aaPredicted RBP11.03□□□□□ -0.64
TMEM253-204ENST00000554844 PHF7Q9BWX1 381 aaPredicted RBP11.03□□□□□ -0.64
TMEM253-204ENST00000554844 IRF2BPLQ9H1B7 796 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 TLR9Q9NR96 1032 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 C1orf112Q9NSG2 853 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 TCEAL9Q9UHQ7 104 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 BARX2Q9UMQ3 279 aaPredicted RBP11.03□□□□□ -0.64
TMEM253-204ENST00000554844 USP15Q9Y4E8 981 aaPredicted RBP11.03□□□□□ -0.64
TMEM253-204ENST00000554844 SLC12A7Q9Y666 1083 aa11.03□□□□□ -0.64
TMEM253-204ENST00000554844 ZNF318Q5VUA4 2279 aa11.02□□□□□ -0.64
TMEM253-204ENST00000554844 GPR182O15218 404 aa11.02□□□□□ -0.65
TMEM253-204ENST00000554844 RPS6KA5O75582 802 aa11.02□□□□□ -0.65
TMEM253-204ENST00000554844 GSPT1P15170 499 aaKnown RBP11.02□□□□□ -0.65
TMEM253-204ENST00000554844 DNAJB1P25685 340 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms