RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 GLG1Q92896 1179 aa16.19■□□□□ 0.18
SHMT2-210ENST00000553950 COPS5Q92905 334 aa16.19■□□□□ 0.18
SHMT2-210ENST00000553950 ERAP1Q9NZ08 941 aa16.19■□□□□ 0.18
SHMT2-210ENST00000553950 RGL1Q9NZL6 768 aa16.19■□□□□ 0.18
SHMT2-210ENST00000553950 MAFBQ9Y5Q3 323 aaPredicted RBP16.19■□□□□ 0.18
SHMT2-210ENST00000553950 SYNRGQ9UMZ2 1314 aa16.19■□□□□ 0.18
SHMT2-210ENST00000553950 GSTTP1A0A1W2PQM5 241 aa16.18■□□□□ 0.18
SHMT2-210ENST00000553950 ARHGEF35A5YM69 484 aa16.18■□□□□ 0.18
SHMT2-210ENST00000553950 OATP04181 439 aa16.18■□□□□ 0.18
SHMT2-210ENST00000553950 LGALS2P05162 132 aa16.18■□□□□ 0.18
SHMT2-210ENST00000553950 CST5P28325 142 aaPredicted RBP16.18■□□□□ 0.18
SHMT2-210ENST00000553950 YWHABP31946 246 aaKnown RBP16.18■□□□□ 0.18
SHMT2-210ENST00000553950 GJA9P57773 515 aa16.18■□□□□ 0.18
SHMT2-210ENST00000553950 POSTNQ15063 836 aa16.18■□□□□ 0.18
SHMT2-210ENST00000553950 LONRF3Q496Y0 759 aa16.18■□□□□ 0.18
SHMT2-210ENST00000553950 SWSAP1Q6NVH7 229 aa16.18■□□□□ 0.18
SHMT2-210ENST00000553950 EXOC8Q8IYI6 725 aa16.18■□□□□ 0.18
SHMT2-210ENST00000553950 CCDC47Q96A33 483 aaKnown RBP16.18■□□□□ 0.18
SHMT2-210ENST00000553950 TIPINQ9BVW5 301 aa16.18■□□□□ 0.18
SHMT2-210ENST00000553950 GTPBP4Q9BZE4 634 aaKnown RBP16.18■□□□□ 0.18
SHMT2-210ENST00000553950 XPNPEP3Q9NQH7 507 aa16.18■□□□□ 0.18
SHMT2-210ENST00000553950 BMP2KQ9NSY1 1161 aaPredicted RBP16.18■□□□□ 0.18
SHMT2-210ENST00000553950 KBTBD4Q9NVX7 518 aa16.18■□□□□ 0.18
SHMT2-210ENST00000553950 SERTAD1Q9UHV2 236 aa16.18■□□□□ 0.18
SHMT2-210ENST00000553950 COL1A2P08123 1366 aa16.17■□□□□ 0.18
SHMT2-210ENST00000553950 SCN10AQ9Y5Y9 1956 aa16.17■□□□□ 0.18
SHMT2-210ENST00000553950 DYNC1LI2O43237 492 aaPredicted RBP16.17■□□□□ 0.18
SHMT2-210ENST00000553950 SORBS3O60504 671 aa16.17■□□□□ 0.18
SHMT2-210ENST00000553950 SMC2O95347 1197 aa16.17■□□□□ 0.18
SHMT2-210ENST00000553950 PLA2G4BP0C869 781 aa16.17■□□□□ 0.18
SHMT2-210ENST00000553950 LBX1P52954 281 aa16.17■□□□□ 0.18
SHMT2-210ENST00000553950 FSCN1Q16658 493 aaKnown RBP16.17■□□□□ 0.18
SHMT2-210ENST00000553950 NAALADL2Q58DX5 795 aa16.17■□□□□ 0.18
SHMT2-210ENST00000553950 GJC2Q5T442 439 aaPredicted RBP16.17■□□□□ 0.18
SHMT2-210ENST00000553950 RNF180Q86T96 592 aa16.17■□□□□ 0.18
SHMT2-210ENST00000553950 BBXQ8WY36 941 aaPredicted RBP16.17■□□□□ 0.18
SHMT2-210ENST00000553950 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.17■□□□□ 0.186e-7■□□□□ 8.9
SHMT2-210ENST00000553950 NRBP2Q9NSY0 501 aa16.17■□□□□ 0.18
SHMT2-210ENST00000553950 BLOC1S4Q9NUP1 217 aa16.17■□□□□ 0.18
SHMT2-210ENST00000553950 SEPT9Q9UHD8 586 aaPredicted RBP16.17■□□□□ 0.18
SHMT2-210ENST00000553950 ADCY6O43306 1168 aa16.16■□□□□ 0.18
SHMT2-210ENST00000553950 GTPBP6O43824 516 aaPredicted RBP16.16■□□□□ 0.18
SHMT2-210ENST00000553950 C6orf222P0C671 652 aaPredicted RBP16.16■□□□□ 0.18
SHMT2-210ENST00000553950 CAPN2P17655 700 aa16.16■□□□□ 0.18
SHMT2-210ENST00000553950 CCND3P30281 292 aaPredicted RBP16.16■□□□□ 0.18
SHMT2-210ENST00000553950 TRIM32Q13049 653 aa16.16■□□□□ 0.18
SHMT2-210ENST00000553950 UGCGQ16739 394 aa16.16■□□□□ 0.18
SHMT2-210ENST00000553950 UTP14CQ5TAP6 766 aaKnown RBP16.16■□□□□ 0.18
SHMT2-210ENST00000553950 CNNM4Q6P4Q7 775 aa16.16■□□□□ 0.18
SHMT2-210ENST00000553950 SYT2Q8N9I0 419 aaPredicted RBP16.16■□□□□ 0.18
SHMT2-210ENST00000553950 PCSK9Q8NBP7 692 aaKnown RBP16.16■□□□□ 0.18
SHMT2-210ENST00000553950 ATP8B4Q8TF62 1192 aa16.16■□□□□ 0.18
SHMT2-210ENST00000553950 PLIN2Q99541 437 aa16.16■□□□□ 0.18
SHMT2-210ENST00000553950 JPH2Q9BR39 696 aaPredicted RBP16.16■□□□□ 0.18
SHMT2-210ENST00000553950 PANK2Q9BZ23 570 aa16.16■□□□□ 0.18
SHMT2-210ENST00000553950 BHMT2Q9H2M3 363 aa16.16■□□□□ 0.18
SHMT2-210ENST00000553950 PRDM10Q9NQV6 1147 aa16.16■□□□□ 0.18
SHMT2-210ENST00000553950 RMND1Q9NWS8 449 aa16.16■□□□□ 0.18
SHMT2-210ENST00000553950 PCNTO95613 3336 aa16.16■□□□□ 0.18
SHMT2-210ENST00000553950 E9PMD0 336 aa16.15■□□□□ 0.18
SHMT2-210ENST00000553950 GAS2O43903 313 aaKnown RBP16.15■□□□□ 0.18
SHMT2-210ENST00000553950 HBP1O60381 514 aa16.15■□□□□ 0.18
SHMT2-210ENST00000553950 F2P00734 622 aa16.15■□□□□ 0.18
SHMT2-210ENST00000553950 SSBP05455 408 aaKnown RBP eCLIP16.15■□□□□ 0.18
SHMT2-210ENST00000553950 KRT18P05783 430 aaKnown RBP16.15■□□□□ 0.18
SHMT2-210ENST00000553950 RFC5P40937 340 aa16.15■□□□□ 0.18
SHMT2-210ENST00000553950 RARRES1P49788 294 aa16.15■□□□□ 0.18
SHMT2-210ENST00000553950 ECM1Q16610 540 aa16.15■□□□□ 0.18
SHMT2-210ENST00000553950 SH3RF1Q7Z6J0 888 aa16.15■□□□□ 0.18
SHMT2-210ENST00000553950 PAGE5Q96GU1 130 aa16.15■□□□□ 0.18
SHMT2-210ENST00000553950 BCAS3Q9H6U6 928 aa16.15■□□□□ 0.18
SHMT2-210ENST00000553950 TMEM63CQ9P1W3 806 aa16.15■□□□□ 0.18
SHMT2-210ENST00000553950 TRPC6Q9Y210 931 aa16.15■□□□□ 0.18
SHMT2-210ENST00000553950 ZNF862O60290 1169 aa16.14■□□□□ 0.17
SHMT2-210ENST00000553950 ADAMTS4O75173 837 aa16.14■□□□□ 0.17
SHMT2-210ENST00000553950 DGAT1O75907 488 aa16.14■□□□□ 0.17
SHMT2-210ENST00000553950 CABYRO75952 493 aa16.14■□□□□ 0.17
SHMT2-210ENST00000553950 SLC12A3P55017 1021 aa16.14■□□□□ 0.17
SHMT2-210ENST00000553950 MCM6Q14566 821 aa16.14■□□□□ 0.17
SHMT2-210ENST00000553950 RBM43Q6ZSC3 357 aaKnown RBP16.14■□□□□ 0.17
SHMT2-210ENST00000553950 KCNK18Q7Z418 384 aa16.14■□□□□ 0.17
SHMT2-210ENST00000553950 GPBP1Q86WP2 473 aa16.14■□□□□ 0.17
SHMT2-210ENST00000553950 TRIML1Q8N9V2 468 aa16.14■□□□□ 0.17
SHMT2-210ENST00000553950 MCPH1Q8NEM0 835 aa16.14■□□□□ 0.17
SHMT2-210ENST00000553950 SH3TC2Q8TF17 1288 aa16.14■□□□□ 0.17
SHMT2-210ENST00000553950 SMARCE1Q969G3 411 aa16.14■□□□□ 0.17
SHMT2-210ENST00000553950 LENG1Q96BZ8 264 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-210ENST00000553950 CEP170P1Q96L14 293 aa16.14■□□□□ 0.17
SHMT2-210ENST00000553950 PCYT2Q99447 389 aa16.14■□□□□ 0.17
SHMT2-210ENST00000553950 C7orf25Q9BPX7 421 aa16.14■□□□□ 0.17
SHMT2-210ENST00000553950 NIFKQ9BYG3 293 aaKnown RBP16.14■□□□□ 0.17
SHMT2-210ENST00000553950 WRAP73Q9P2S5 460 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-210ENST00000553950 ODF2LQ9ULJ1 636 aa16.14■□□□□ 0.17
SHMT2-210ENST00000553950 MOXD2PA6NHM9 499 aa16.13■□□□□ 0.17
SHMT2-210ENST00000553950 H3BRB1 525 aa16.13■□□□□ 0.17
SHMT2-210ENST00000553950 TBCAO75347 108 aaKnown RBP16.13■□□□□ 0.17
SHMT2-210ENST00000553950 ZNF286BP0CG31 522 aa16.13■□□□□ 0.17
SHMT2-210ENST00000553950 GUCY2CP25092 1073 aa16.13■□□□□ 0.17
SHMT2-210ENST00000553950 AFMP43652 599 aa16.13■□□□□ 0.17
SHMT2-210ENST00000553950 XKR9Q5GH70 373 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8601.5 ms