RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 TSEN2Q8NCE0 465 aaKnown RBP13.42□□□□□ -0.26
SHMT2-207ENST00000553837 SPATA4Q8NEY3 305 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 HDAC7Q8WUI4 952 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 MBOAT7Q96N66 472 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 PURBQ96QR8 312 aaKnown RBP13.42□□□□□ -0.26
SHMT2-207ENST00000553837 DHX36Q9H2U1 1008 aaKnown RBP13.42□□□□□ -0.26
SHMT2-207ENST00000553837 TDRD3Q9H7E2 651 aaKnown RBP13.42□□□□□ -0.26
SHMT2-207ENST00000553837 SLC40A1Q9NP59 571 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 PANK4Q9NVE7 773 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 STIM2Q9P246 746 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 ARHGAP20Q9P2F6 1191 aa13.42□□□□□ -0.26
SHMT2-207ENST00000553837 CYP3A7-CYP3A51PA0A087WV96 503 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 OPLAHO14841 1288 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 MARCH6O60337 910 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 PPP1R37O75864 691 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 NDUFB10O96000 172 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 CYP3A7P24462 503 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 LRRC63Q05C16 580 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 SPIRE1Q08AE8 756 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 SNCBQ16143 134 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 MAN2A1Q16706 1144 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 AOC3Q16853 763 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 ARSHQ5FYA8 562 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 FKBP15Q5T1M5 1219 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 TRIM58Q8NG06 486 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 RNPC3Q96LT9 517 aaKnown RBP13.41□□□□□ -0.26
SHMT2-207ENST00000553837 ZIM3Q96PE6 472 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 CCT8L2Q96SF2 557 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 HINFPQ9BQA5 517 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 CENPHQ9H3R5 247 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 A0A1W2PRG0 241 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 PLA2G4BP0C869 781 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 HNRNPH3P31942 346 aaKnown RBP13.41□□□□□ -0.26
SHMT2-207ENST00000553837 PSMC6P62333 389 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 KCNMA1Q12791 1236 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 PSMD2Q13200 908 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 EZH2Q15910 746 aaKnown RBP13.41□□□□□ -0.26
SHMT2-207ENST00000553837 USH1GQ495M9 461 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 GLE1Q53GS7 698 aaKnown RBP13.41□□□□□ -0.26
SHMT2-207ENST00000553837 CFAP58Q5T655 872 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 KCTD16Q68DU8 428 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 NLRP14Q86W24 1093 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 MYOCDQ8IZQ8 938 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 C1orf131Q8NDD1 294 aaKnown RBP13.41□□□□□ -0.26
SHMT2-207ENST00000553837 ETNPPLQ8TBG4 499 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 LENG9Q96B70 501 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 CCDC114Q96M63 670 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 TMX4Q9H1E5 349 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-207ENST00000553837 SMCHD1A6NHR9 2005 aa13.41□□□□□ -0.26
SHMT2-207ENST00000553837 POTEFA5A3E0 1075 aa13.4□□□□□ -0.26
SHMT2-207ENST00000553837 TACC1O75410 805 aa13.4□□□□□ -0.26
SHMT2-207ENST00000553837 NEBLO76041 1014 aa13.4□□□□□ -0.26
SHMT2-207ENST00000553837 FAM107AO95990 144 aa13.4□□□□□ -0.26
SHMT2-207ENST00000553837 POTEIP0CG38 1075 aa13.4□□□□□ -0.26
SHMT2-207ENST00000553837 EZRP15311 586 aaKnown RBP13.4□□□□□ -0.26
SHMT2-207ENST00000553837 CYP11B2P19099 503 aa13.4□□□□□ -0.26
SHMT2-207ENST00000553837 USP11P51784 963 aa13.4□□□□□ -0.26
SHMT2-207ENST00000553837 VAV2P52735 878 aa13.4□□□□□ -0.26
SHMT2-207ENST00000553837 FKBP1AP62942 108 aaKnown RBP13.4□□□□□ -0.26
SHMT2-207ENST00000553837 HDLBPQ00341 1268 aaKnown RBP13.4□□□□□ -0.26
SHMT2-207ENST00000553837 CDK17Q00537 523 aa13.4□□□□□ -0.26
SHMT2-207ENST00000553837 GUCY1A3Q02108 690 aa13.4□□□□□ -0.26
SHMT2-207ENST00000553837 IFT88Q13099 833 aa13.4□□□□□ -0.26
SHMT2-207ENST00000553837 FAM26FQ5R3K3 315 aa13.4□□□□□ -0.26
SHMT2-207ENST00000553837 POTEGQ6S5H5 508 aa13.4□□□□□ -0.26
SHMT2-207ENST00000553837 POTEEQ6S8J3 1075 aa13.4□□□□□ -0.26
SHMT2-207ENST00000553837 CCDC121Q6ZUS5 278 aa13.4□□□□□ -0.26
SHMT2-207ENST00000553837 PARP9Q8IXQ6 854 aa13.4□□□□□ -0.26
SHMT2-207ENST00000553837 SMCR8Q8TEV9 937 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-207ENST00000553837 BAP1Q92560 729 aa13.4□□□□□ -0.26
SHMT2-207ENST00000553837 PRMT6Q96LA8 375 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-207ENST00000553837 TRIM6Q9C030 488 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-207ENST00000553837 MMRN2Q9H8L6 949 aa13.4□□□□□ -0.26
SHMT2-207ENST00000553837 PLAGL2Q9UPG8 496 aa13.4□□□□□ -0.26
SHMT2-207ENST00000553837 A0A1B0GUA9 196 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 MACROD2A1Z1Q3 448 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 LRRC53A6NM62 1247 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 YDJCA8MPS7 323 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 FAM86B1E9PN63 330 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 GH2P01242 217 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 FAM86B2P0C5J1 330 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 TCP1P17987 556 aaKnown RBP13.39□□□□□ -0.27
SHMT2-207ENST00000553837 MDH1P40925 334 aaKnown RBP13.39□□□□□ -0.27
SHMT2-207ENST00000553837 ARHGAP4P98171 946 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 SLC7A5Q01650 507 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 ADCY2Q08462 1091 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 ABCB5Q2M3G0 1257 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 KIAA1755Q5JYT7 1200 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 TMEM179Q6ZVK1 233 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 GPBP1Q86WP2 473 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 CD302Q8IX05 232 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 NELFCDQ8IXH7 590 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 IFT20Q8IY31 132 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 IQCKQ8N0W5 287 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 SH2D3CQ8N5H7 860 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 MYCBPAPQ8TBZ2 947 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 C7orf43Q8WVR3 580 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 BCAS3Q9H6U6 928 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 SERPINA10Q9UK55 444 aa13.39□□□□□ -0.27
SHMT2-207ENST00000553837 USO1O60763 962 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms