RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 GRIN2DO15399 1336 aa20.21■□□□□ 0.83
PSEN1-208ENST00000553719 KDM3AQ9Y4C1 1321 aa20.21■□□□□ 0.83
PSEN1-208ENST00000553719 MKI67P46013 3256 aaKnown RBP20.2■□□□□ 0.82
PSEN1-208ENST00000553719 A0A1W2PQ45 241 aaPredicted RBP20.2■□□□□ 0.82
PSEN1-208ENST00000553719 A0A1W2PQY0 241 aa20.2■□□□□ 0.82
PSEN1-208ENST00000553719 KBTBD13C9JR72 458 aa20.2■□□□□ 0.82
PSEN1-208ENST00000553719 TFRCP02786 760 aaKnown RBP20.2■□□□□ 0.82
PSEN1-208ENST00000553719 HOXC8P31273 242 aa20.2■□□□□ 0.82
PSEN1-208ENST00000553719 PSEN2P49810 448 aa20.2■□□□□ 0.82
PSEN1-208ENST00000553719 MFSD10Q14728 455 aa20.2■□□□□ 0.82
PSEN1-208ENST00000553719 KARSQ15046 597 aaKnown RBP20.2■□□□□ 0.82
PSEN1-208ENST00000553719 UBE2Q1Q7Z7E8 422 aa20.2■□□□□ 0.82
PSEN1-208ENST00000553719 TPH2Q8IWU9 490 aa20.2■□□□□ 0.82
PSEN1-208ENST00000553719 KCTD17Q8N5Z5 321 aa20.2■□□□□ 0.82
PSEN1-208ENST00000553719 ATP8B4Q8TF62 1192 aa20.2■□□□□ 0.82
PSEN1-208ENST00000553719 KATNAL1Q9BW62 490 aa20.2■□□□□ 0.82
PSEN1-208ENST00000553719 RNPEPQ9H4A4 650 aa20.2■□□□□ 0.82
PSEN1-208ENST00000553719 LOXHD1Q8IVV2 1947 aa20.19■□□□□ 0.82
PSEN1-208ENST00000553719 ZBTB42B2RXF5 422 aa20.19■□□□□ 0.82
PSEN1-208ENST00000553719 DKC1O60832 514 aaKnown RBP eCLIP20.19■□□□□ 0.82
PSEN1-208ENST00000553719 GADD45BO75293 160 aaPredicted RBP20.19■□□□□ 0.82
PSEN1-208ENST00000553719 OATP04181 439 aa20.19■□□□□ 0.82
PSEN1-208ENST00000553719 E2F4Q16254 413 aa20.19■□□□□ 0.82
PSEN1-208ENST00000553719 KIAA0753Q2KHM9 967 aa20.19■□□□□ 0.82
PSEN1-208ENST00000553719 NAALADL2Q58DX5 795 aa20.19■□□□□ 0.82
PSEN1-208ENST00000553719 XKR3Q5GH77 459 aa20.19■□□□□ 0.82
PSEN1-208ENST00000553719 ANO5Q75V66 913 aa20.19■□□□□ 0.82
PSEN1-208ENST00000553719 KCNK18Q7Z418 384 aa20.19■□□□□ 0.82
PSEN1-208ENST00000553719 SLC43A3Q8NBI5 491 aa20.19■□□□□ 0.82
PSEN1-208ENST00000553719 DIS3LQ8TF46 1054 aaKnown RBP20.19■□□□□ 0.82
PSEN1-208ENST00000553719 FAM167AQ96KS9 214 aa20.19■□□□□ 0.82
PSEN1-208ENST00000553719 CEP89Q96ST8 783 aa20.19■□□□□ 0.82
PSEN1-208ENST00000553719 GOLPH3LQ9H4A5 285 aa20.19■□□□□ 0.82
PSEN1-208ENST00000553719 MYCNP04198 464 aaPredicted RBP20.18■□□□□ 0.82
PSEN1-208ENST00000553719 PLCG1P19174 1290 aa20.18■□□□□ 0.82
PSEN1-208ENST00000553719 MARK3P27448 753 aa20.18■□□□□ 0.82
PSEN1-208ENST00000553719 PSMC6P62333 389 aa20.18■□□□□ 0.82
PSEN1-208ENST00000553719 TARBP2Q15633 366 aaKnown RBP20.18■□□□□ 0.82
PSEN1-208ENST00000553719 SESTD1Q86VW0 696 aa20.18■□□□□ 0.82
PSEN1-208ENST00000553719 BBXQ8WY36 941 aaPredicted RBP20.18■□□□□ 0.82
PSEN1-208ENST00000553719 NIFKQ9BYG3 293 aaKnown RBP20.18■□□□□ 0.82
PSEN1-208ENST00000553719 NT5C3AQ9H0P0 336 aa20.18■□□□□ 0.82
PSEN1-208ENST00000553719 DDX19AQ9NUU7 478 aaKnown RBP20.18■□□□□ 0.82
PSEN1-208ENST00000553719 KIAA1024Q9UPX6 916 aa20.18■□□□□ 0.82
PSEN1-208ENST00000553719 ZBTB39O15060 712 aa20.17■□□□□ 0.82
PSEN1-208ENST00000553719 XRCC6P12956 609 aaKnown RBP eCLIP20.17■□□□□ 0.82
PSEN1-208ENST00000553719 PFKFB1P16118 471 aa20.17■□□□□ 0.82
PSEN1-208ENST00000553719 YWHABP31946 246 aaKnown RBP20.17■□□□□ 0.82
PSEN1-208ENST00000553719 TXLNAP40222 546 aa20.17■□□□□ 0.82
PSEN1-208ENST00000553719 MRPS27Q92552 414 aaKnown RBP20.17■□□□□ 0.82
PSEN1-208ENST00000553719 CALML4Q96GE6 196 aa20.17■□□□□ 0.82
PSEN1-208ENST00000553719 GLT1D1Q96MS3 346 aa20.17■□□□□ 0.82
PSEN1-208ENST00000553719 LMBRD1Q9NUN5 540 aa20.17■□□□□ 0.82
PSEN1-208ENST00000553719 BLOC1S4Q9NUP1 217 aa20.17■□□□□ 0.82
PSEN1-208ENST00000553719 A0A1B0GVL5 298 aa20.16■□□□□ 0.82
PSEN1-208ENST00000553719 TMEM150BA6NC51 233 aa20.16■□□□□ 0.82
PSEN1-208ENST00000553719 HBP1O60381 514 aa20.16■□□□□ 0.82
PSEN1-208ENST00000553719 ADAM17P78536 824 aa20.16■□□□□ 0.82
PSEN1-208ENST00000553719 HIC1Q14526 733 aa20.16■□□□□ 0.82
PSEN1-208ENST00000553719 NBPF20Q3BBV1 942 aa20.16■□□□□ 0.82
PSEN1-208ENST00000553719 FSIP1Q8NA03 581 aa20.16■□□□□ 0.82
PSEN1-208ENST00000553719 NACC1Q96RE7 527 aa20.16■□□□□ 0.82
PSEN1-208ENST00000553719 STARD7Q9NQZ5 370 aa20.16■□□□□ 0.82
PSEN1-208ENST00000553719 ANKEF1Q9NU02 776 aa20.16■□□□□ 0.82
PSEN1-208ENST00000553719 FAM13BQ9NYF5 915 aa20.16■□□□□ 0.82
PSEN1-208ENST00000553719 DBR1Q9UK59 544 aaKnown RBP20.16■□□□□ 0.82
PSEN1-208ENST00000553719 KCNH3Q9ULD8 1083 aa20.16■□□□□ 0.82
PSEN1-208ENST00000553719 COL1A2P08123 1366 aa20.16■□□□□ 0.82
PSEN1-208ENST00000553719 E9PMD0 336 aa20.15■□□□□ 0.82
PSEN1-208ENST00000553719 PRPF40AO75400 957 aaKnown RBP20.15■□□□□ 0.82
PSEN1-208ENST00000553719 SMIM10L2AP0DMW4 78 aa20.15■□□□□ 0.82
PSEN1-208ENST00000553719 SMIM10L2BP0DMW5 78 aa20.15■□□□□ 0.82
PSEN1-208ENST00000553719 EN2P19622 333 aaPredicted RBP20.15■□□□□ 0.82
PSEN1-208ENST00000553719 RARRES1P49788 294 aa20.15■□□□□ 0.82
PSEN1-208ENST00000553719 NDUFA8P51970 172 aa20.15■□□□□ 0.82
PSEN1-208ENST00000553719 UBE2HP62256 183 aa20.15■□□□□ 0.82
PSEN1-208ENST00000553719 ITGA7Q13683 1181 aa20.15■□□□□ 0.82
PSEN1-208ENST00000553719 SNX17Q15036 470 aa20.15■□□□□ 0.82
PSEN1-208ENST00000553719 PLA2G4FQ68DD2 849 aa20.15■□□□□ 0.82
PSEN1-208ENST00000553719 NFRKBQ6P4R8 1299 aa20.15■□□□□ 0.82
PSEN1-208ENST00000553719 ENGASEQ8NFI3 743 aa20.15■□□□□ 0.82
PSEN1-208ENST00000553719 PIGOQ8TEQ8 1089 aa20.15■□□□□ 0.82
PSEN1-208ENST00000553719 PLIN2Q99541 437 aa20.15■□□□□ 0.82
PSEN1-208ENST00000553719 CCDC39Q9UFE4 941 aa20.15■□□□□ 0.82
PSEN1-208ENST00000553719 GTF2IRD1Q9UHL9 959 aa20.15■□□□□ 0.82
PSEN1-208ENST00000553719 A0A087WWV3 80 aa20.14■□□□□ 0.81
PSEN1-208ENST00000553719 A0A0U1RQG5 324 aaPredicted RBP20.14■□□□□ 0.81
PSEN1-208ENST00000553719 EYA4O95677 639 aa20.14■□□□□ 0.81
PSEN1-208ENST00000553719 INSRRP14616 1297 aa20.14■□□□□ 0.81
PSEN1-208ENST00000553719 CDK7P50613 346 aa20.14■□□□□ 0.81
PSEN1-208ENST00000553719 PTPN11Q06124 597 aaPredicted RBP20.14■□□□□ 0.81
PSEN1-208ENST00000553719 PPFIA1Q13136 1202 aa20.14■□□□□ 0.81
PSEN1-208ENST00000553719 SNW1Q13573 536 aaKnown RBP20.14■□□□□ 0.81
PSEN1-208ENST00000553719 MARCH8Q5T0T0 291 aa20.14■□□□□ 0.81
PSEN1-208ENST00000553719 C1orf53Q5VUE5 145 aa20.14■□□□□ 0.81
PSEN1-208ENST00000553719 CCDC73Q6ZRK6 1079 aa20.14■□□□□ 0.81
PSEN1-208ENST00000553719 CKAP2LQ8IYA6 745 aa20.14■□□□□ 0.81
PSEN1-208ENST00000553719 PPP1R13LQ8WUF5 828 aa20.14■□□□□ 0.81
PSEN1-208ENST00000553719 LMBR1Q8WVP7 490 aa20.14■□□□□ 0.81
PSEN1-208ENST00000553719 RAD54LQ92698 747 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms