RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 CHMP2AO43633 222 aa11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 SORBS3O60504 671 aa11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 LYPLA2O95372 231 aa11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 OATP04181 439 aa11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 INSRRP14616 1297 aa11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 ANP32AP39687 249 aaKnown RBP11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 TXKP42681 527 aa11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 TBC1D8BQ0IIM8 1120 aa11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 PLCB4Q15147 1175 aa11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 KRT79Q5XKE5 535 aa11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 CCDC60Q8IWA6 550 aaPredicted RBP11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 SLC7A3Q8WY07 619 aa11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 HAS1Q92839 578 aa11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 APBB2Q92870 758 aa11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 NACC1Q96RE7 527 aa11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 NIFKQ9BYG3 293 aaKnown RBP11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 NT5C3AQ9H0P0 336 aa11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 UNC45AQ9H3U1 944 aa11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 TUFT1Q9NNX1 390 aa11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 ANKEF1Q9NU02 776 aa11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 TRMT13Q9NUP7 481 aaKnown RBP11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 CFAP45Q9UL16 551 aa11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 IGSF9BQ9UPX0 1349 aa11.51□□□□□ -0.57
TRAFD1-208ENST00000552890 MYH9P35579 1960 aaKnown RBP11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 ASAP2O43150 1006 aa11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 BAIAP3O94812 1187 aa11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 MARK3P27448 753 aa11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 TXLNAP40222 546 aa11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 RFC5P40937 340 aa11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 IRX5P78411 483 aaPredicted RBP11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 PRKCEQ02156 737 aa11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 PTGDRQ13258 359 aa11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 ZNF174Q15697 407 aa11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 NCAPH2Q6IBW4 605 aa11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 GDF6Q6KF10 455 aaPredicted RBP11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 LMBR1Q8WVP7 490 aa11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 TCP11Q8WWU5 503 aa11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 POLR3CQ9BUI4 534 aaPredicted RBP11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 INO80BQ9C086 356 aaPredicted RBP11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 IL23AQ9NPF7 189 aa11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 SETD4Q9NVD3 440 aa11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 LRWD1Q9UFC0 647 aa11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 VAV3Q9UKW4 847 aa11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 ZMYND8Q9ULU4 1186 aaPredicted RBP11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 KDM3AQ9Y4C1 1321 aa11.5□□□□□ -0.57
TRAFD1-208ENST00000552890 TRIM43BA6NCK2 446 aa11.49□□□□□ -0.57
TRAFD1-208ENST00000552890 RSPH10B2B2RC85 870 aa11.49□□□□□ -0.57
TRAFD1-208ENST00000552890 RSPH10BP0C881 870 aa11.49□□□□□ -0.57
TRAFD1-208ENST00000552890 CYP2C9P11712 490 aa11.49□□□□□ -0.57
TRAFD1-208ENST00000552890 RPA1P27694 616 aa11.49□□□□□ -0.57
TRAFD1-208ENST00000552890 LONP1P36776 959 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-208ENST00000552890 THPOP40225 353 aa11.49□□□□□ -0.57
TRAFD1-208ENST00000552890 MAGEA10P43363 369 aaPredicted RBP11.49□□□□□ -0.57
TRAFD1-208ENST00000552890 ADAM17P78536 824 aa11.49□□□□□ -0.57
TRAFD1-208ENST00000552890 NUCB2P80303 420 aa11.49□□□□□ -0.57
TRAFD1-208ENST00000552890 ATP2C1P98194 919 aaPredicted RBP11.49□□□□□ -0.57
TRAFD1-208ENST00000552890 PCBP1Q15365 356 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRAFD1-208ENST00000552890 EARS2Q5JPH6 523 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-208ENST00000552890 LRRC8DQ7L1W4 858 aa11.49□□□□□ -0.57
TRAFD1-208ENST00000552890 TRIM50Q86XT4 487 aa11.49□□□□□ -0.57
TRAFD1-208ENST00000552890 TRIM43Q96BQ3 446 aaPredicted RBP11.49□□□□□ -0.57
TRAFD1-208ENST00000552890 CDK5RAP3Q96JB5 506 aa11.49□□□□□ -0.57
TRAFD1-208ENST00000552890 GDF15Q99988 308 aa11.49□□□□□ -0.57
TRAFD1-208ENST00000552890 LXNQ9BS40 222 aa11.49□□□□□ -0.57
TRAFD1-208ENST00000552890 DDX11L8A8MPP1 907 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 ADAMTS3O15072 1205 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 EDIL3O43854 480 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 DGAT1O75907 488 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 FGBP02675 491 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 IQCF3P0C7M6 154 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 ZSCAN22P10073 491 aaPredicted RBP11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 CKBP12277 381 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 SCP2P22307 547 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 KLRC1P26715 233 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 UBA7P41226 1012 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 TECP42680 631 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 MTHFD1LQ6UB35 978 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 TPH2Q8IWU9 490 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 TDHQ8IZJ6 230 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 IGSF22Q8N9C0 903 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 MCPH1Q8NEM0 835 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 RSPH1Q8WYR4 309 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 BADQ92934 168 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 PCYT2Q99447 389 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 HSD17B14Q9BPX1 270 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 EIF2AK1Q9BQI3 630 aaKnown RBP11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 PYM1Q9BRP8 204 aaKnown RBP11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 TIPINQ9BVW5 301 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 FTHL17Q9BXU8 183 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 BCAS3Q9H6U6 928 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 PHLPP2Q6ZVD8 1323 aa11.48□□□□□ -0.57
TRAFD1-208ENST00000552890 ABHD14A-ACY1A0A1B0GW23 586 aa11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 KIF28PB7ZC32 967 aa11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 TREHO43280 583 aa11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 SYN1P17600 705 aa11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 PTGS1P23219 599 aa11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 YWHABP31946 246 aaKnown RBP11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 POLGP54098 1239 aaPredicted RBP11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 SPIRE1Q08AE8 756 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms