RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 SPTBN2O15020 2390 aa13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 LAMA4Q16363 1823 aa13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 STAM2O75886 525 aa13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 PARP1P09874 1014 aaKnown RBP13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 STAG3L1P0CL83 205 aa13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 HOXB8P17481 243 aaPredicted RBP13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 MRPS6P82932 125 aaKnown RBP13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 MTMR3Q13615 1198 aa13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 SLC35G1Q2M3R5 365 aa13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 MCMDC2Q4G0Z9 681 aa13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 UTP14CQ5TAP6 766 aaKnown RBP13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 ZBTB33Q86T24 672 aa13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 ZNF589Q86UQ0 364 aaPredicted RBP13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 TICAM2Q86XR7 235 aa13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 STAG2Q8N3U4 1231 aa13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 ENAHQ8N8S7 591 aaPredicted RBP13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 DNAJB3Q8WWF6 145 aa13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 SENP7Q9BQF6 1050 aa13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 SMOC2Q9H3U7 446 aa13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 RNF41Q9H4P4 317 aaPredicted RBP13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 KAT14Q9H8E8 782 aa13.16□□□□□ -0.3
SUPT16H-202ENST00000552829 GCOM1H8Y6P7 765 aaPredicted RBP13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 ZBTB5O15062 677 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 FIBPO43427 364 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 PPFIA3O75145 1194 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 FGF18O76093 207 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 POLR2MP0CAP2 368 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 SCG2P13521 617 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 MX1P20591 662 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 TECP42680 631 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 PPFIA1Q13136 1202 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 GRIK4Q16099 956 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 GNPTABQ3T906 1256 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 MICAL1Q8TDZ2 1067 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 EVI5LQ96CN4 794 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 RMDN1Q96DB5 314 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 TMX1Q9H3N1 280 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 TUBE1Q9UJT0 475 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 PADI3Q9ULW8 664 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 LZTS1Q9Y250 596 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 NR2E1Q9Y466 385 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 PCDHB12Q9Y5F1 795 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 FANCMQ8IYD8 2048 aa13.15□□□□□ -0.3
SUPT16H-202ENST00000552829 CACNA1GO43497 2377 aa13.14□□□□□ -0.31
SUPT16H-202ENST00000552829 C2CD4DB7Z1M9 353 aa13.14□□□□□ -0.31
SUPT16H-202ENST00000552829 DHX16O60231 1041 aaKnown RBP13.14□□□□□ -0.31
SUPT16H-202ENST00000552829 RPLP2P05387 115 aaKnown RBP13.14□□□□□ -0.31
SUPT16H-202ENST00000552829 ARP10275 920 aa13.14□□□□□ -0.31
SUPT16H-202ENST00000552829 SP100P23497 879 aaPredicted RBP13.14□□□□□ -0.31
SUPT16H-202ENST00000552829 CWF19L1Q69YN2 538 aaKnown RBP13.14□□□□□ -0.31
SUPT16H-202ENST00000552829 FCHSD1Q86WN1 690 aa13.14□□□□□ -0.31
SUPT16H-202ENST00000552829 IQCA1Q86XH1 822 aa13.14□□□□□ -0.31
SUPT16H-202ENST00000552829 ZSCAN10Q96SZ4 725 aaPredicted RBP13.14□□□□□ -0.31
SUPT16H-202ENST00000552829 CDH22Q9UJ99 828 aa13.14□□□□□ -0.31
SUPT16H-202ENST00000552829 IGSF9BQ9UPX0 1349 aa13.13□□□□□ -0.31
SUPT16H-202ENST00000552829 GSTTP1A0A1W2PQM5 241 aa13.13□□□□□ -0.31
SUPT16H-202ENST00000552829 PALM3A6NDB9 673 aaPredicted RBP13.13□□□□□ -0.31
SUPT16H-202ENST00000552829 KLRF2D3W0D1 207 aa13.13□□□□□ -0.31
SUPT16H-202ENST00000552829 KRT37O76014 449 aa13.13□□□□□ -0.31
SUPT16H-202ENST00000552829 SRGAP2BP0DMP2 458 aa13.13□□□□□ -0.31
SUPT16H-202ENST00000552829 SARSP49591 514 aaKnown RBP13.13□□□□□ -0.31
SUPT16H-202ENST00000552829 PLCB3Q01970 1234 aa13.13□□□□□ -0.31
SUPT16H-202ENST00000552829 FAM43BQ6ZT52 329 aaPredicted RBP13.13□□□□□ -0.31
SUPT16H-202ENST00000552829 COLGALT1Q8NBJ5 622 aa13.13□□□□□ -0.31
SUPT16H-202ENST00000552829 CCDC136Q96JN2 1154 aa13.13□□□□□ -0.31
SUPT16H-202ENST00000552829 APOL5Q9BWW9 433 aa13.13□□□□□ -0.31
SUPT16H-202ENST00000552829 POMKQ9H5K3 350 aa13.13□□□□□ -0.31
SUPT16H-202ENST00000552829 TMEM260Q9NX78 707 aa13.13□□□□□ -0.31
SUPT16H-202ENST00000552829 KDM3AQ9Y4C1 1321 aa13.13□□□□□ -0.31
SUPT16H-202ENST00000552829 EVPLQ92817 2033 aa13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 HIDE1A8MVS5 230 aa13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 TRIM6-TRIM34B2RNG4 842 aa13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 MGEA5O60502 916 aa13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 CHRM1P11229 460 aaPredicted RBP13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 NPR3P17342 541 aa13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 TCF7P36402 384 aaPredicted RBP13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 NMIQ13287 307 aaPredicted RBP13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 IER5Q5VY09 327 aa13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 ZDHHC14Q8IZN3 488 aa13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 MRPS27Q92552 414 aaKnown RBP13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 ZBTB10Q96DT7 871 aa13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 NECTIN4Q96NY8 510 aa13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 ADAM7Q9H2U9 754 aa13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 CWH43Q9H720 699 aa13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 AAASQ9NRG9 546 aa13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 RYDENQ9NUL5 291 aaKnown RBP13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 ERAP1Q9NZ08 941 aa13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 RTEL1Q9NZ71 1219 aa13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 ZSWIM5Q9P217 1185 aa13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 HCSTQ9UBK5 93 aa13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 MAD2L2Q9UI95 211 aa13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 TRPV2Q9Y5S1 764 aa13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 GPR179Q6PRD1 2367 aa13.12□□□□□ -0.31
SUPT16H-202ENST00000552829 DENND4AQ7Z401 1863 aa13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 RRN3P2A6NIE6 340 aa13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 B4E1Z4 1266 aa13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 PI15O43692 258 aa13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 ASGR2P07307 311 aa13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 KCNA2P16389 499 aa13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 AOC1P19801 751 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms