RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 STAG2Q8N3U4 1231 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 CCDC82Q8N4S0 544 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 GMCL1P1Q8NEA9 526 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 NPLOC4Q8TAT6 608 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 ACER1Q8TDN7 264 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 C8orf76Q96K31 380 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 ALG1Q9BT22 464 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 SPZ1Q9BXG8 430 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 MOV10L1Q9BXT6 1211 aaKnown RBP7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 ALG2Q9H553 416 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 MARK1Q9P0L2 795 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 SCHIP1Q9P0W5 487 aaPredicted RBP7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 BTBD7Q9P203 1132 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 NRBP1Q9UHY1 535 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 ALPK3Q96L96 1907 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 TCHHQ07283 1943 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 F5H6K3 240 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 WDR46O15213 610 aaKnown RBP7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 EFSO43281 561 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 CNMDO75829 334 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 CYBAP13498 195 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 XBP1P17861 261 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 MCM4P33991 863 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 KLRC3Q07444 240 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 ZNF543Q08ER8 600 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 TRIM29Q14134 588 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 PKN1Q16512 942 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 KRT40Q6A162 431 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 CCDC174Q6PII3 467 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 CLEC10AQ8IUN9 316 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 FAM177A1Q8N128 213 aaPredicted RBP7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 DCAF4Q8WV16 495 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 FOXD4L4Q8WXT5 416 aaPredicted RBP7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 TRIM11Q96F44 468 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 POM121Q96HA1 1249 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 FAM161BQ96MY7 647 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 MMP19Q99542 508 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 RIOX1Q9H6W3 641 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 AVENQ9NQS1 362 aaPredicted RBP7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 NOP53Q9NZM5 478 aaKnown RBP7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 FLRT1Q9NZU1 646 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 CNPY2Q9Y2B0 182 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 TMX2Q9Y320 296 aa7.06□□□□□ -1.28
DEPDC4-209ENST00000550587 A0A1W2PRG0 241 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 DCDC2CA8MYV0 355 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 GOLGA6L22H0YM25 854 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 CYTH3O43739 400 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 GOLGA8HP0CJ92 632 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 SCG2P13521 617 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 RAG1P15918 1043 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 PTMSP20962 102 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 U2AF2P26368 475 aaKnown RBP eCLIP7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 NOS2P35228 1153 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 ADCYAP1R1P41586 468 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 SMAD3P84022 425 aaKnown RBP7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 PFKFB3Q16875 520 aaPredicted RBP7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 SAMD5Q5TGI4 173 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 C1orf53Q5VUE5 145 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 ANO1Q5XXA6 986 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 SLFN13Q68D06 897 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 ATL3Q6DD88 541 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 BTNL9Q6UXG8 535 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 LRRC69Q6ZNQ3 347 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 BRAPQ7Z569 592 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 SPICE1Q8N0Z3 855 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 LRRC47Q8N1G4 583 aaKnown RBP7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 BADQ92934 168 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 FERMT2Q96AC1 680 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 VTI1AQ96AJ9 217 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 RRP36Q96EU6 259 aaKnown RBP7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 AIFM3Q96NN9 605 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 VCPKMTQ9H867 229 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 SPC25Q9HBM1 224 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 XPNPEP3Q9NQH7 507 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 SH3GLB2Q9NR46 395 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 MTMR7Q9Y216 660 aa7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 DIS3Q9Y2L1 958 aaKnown RBP7.05□□□□□ -1.28
DEPDC4-209ENST00000550587 TMEM265A0A087WTH1 108 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 PLA2G6O60733 806 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 NDUFB10O96000 172 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 MMP1P03956 469 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 CLTBP09497 229 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 BMP3P12645 472 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 AKR1A1P14550 325 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 PLA2G5P39877 138 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 STAT3P40763 770 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 SLC1A4P43007 532 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 EPHA4P54764 986 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 RESTQ13127 1097 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 LRRC41Q15345 812 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 SAFBQ15424 915 aaKnown RBP eCLIP7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 SHHQ15465 462 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 TEAD4Q15561 434 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 SLC35G1Q2M3R5 365 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 SH3PXD2AQ5TCZ1 1133 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 MCTP1Q6DN14 999 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 GALNT17Q6IS24 598 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 KCTD1Q719H9 257 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 FERMT3Q86UX7 667 aa7.04□□□□□ -1.28
DEPDC4-209ENST00000550587 SLC9A9Q8IVB4 645 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms