RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 PXYLP1Q8TE99 480 aa15.77■□□□□ 0.12
CACNB3-216ENST00000550391 SEPT1Q8WYJ6 367 aa15.77■□□□□ 0.12
CACNB3-216ENST00000550391 RAD54LQ92698 747 aa15.77■□□□□ 0.12
CACNB3-216ENST00000550391 GPR20Q99678 358 aa15.77■□□□□ 0.12
CACNB3-216ENST00000550391 LXNQ9BS40 222 aa15.77■□□□□ 0.12
CACNB3-216ENST00000550391 GZF1Q9H116 711 aaPredicted RBP15.77■□□□□ 0.12
CACNB3-216ENST00000550391 ZSWIM4Q9H7M6 989 aa15.77■□□□□ 0.12
CACNB3-216ENST00000550391 WRAP73Q9P2S5 460 aaPredicted RBP15.77■□□□□ 0.12
CACNB3-216ENST00000550391 DNM3Q9UQ16 869 aa15.77■□□□□ 0.12
CACNB3-216ENST00000550391 E9PMD0 336 aa15.76■□□□□ 0.11
CACNB3-216ENST00000550391 DKC1O60832 514 aaKnown RBP eCLIP15.76■□□□□ 0.11
CACNB3-216ENST00000550391 LYPLA2O95372 231 aa15.76■□□□□ 0.11
CACNB3-216ENST00000550391 PTGS1P23219 599 aa15.76■□□□□ 0.11
CACNB3-216ENST00000550391 AFMP43652 599 aa15.76■□□□□ 0.11
CACNB3-216ENST00000550391 PSMC5P62195 406 aa15.76■□□□□ 0.11
CACNB3-216ENST00000550391 MDM2Q00987 491 aaPredicted RBP15.76■□□□□ 0.11
CACNB3-216ENST00000550391 TRIM32Q13049 653 aa15.76■□□□□ 0.11
CACNB3-216ENST00000550391 UGCGQ16739 394 aa15.76■□□□□ 0.11
CACNB3-216ENST00000550391 HSDL1Q3SXM5 330 aa15.76■□□□□ 0.11
CACNB3-216ENST00000550391 GJC2Q5T442 439 aaPredicted RBP15.76■□□□□ 0.11
CACNB3-216ENST00000550391 RBM43Q6ZSC3 357 aaKnown RBP15.76■□□□□ 0.11
CACNB3-216ENST00000550391 RAET1EQ8TD07 263 aa15.76■□□□□ 0.11
CACNB3-216ENST00000550391 LARP4BQ92615 738 aaKnown RBP15.76■□□□□ 0.11
CACNB3-216ENST00000550391 SPATA33Q96N06 139 aa15.76■□□□□ 0.11
CACNB3-216ENST00000550391 NACC1Q96RE7 527 aa15.76■□□□□ 0.11
CACNB3-216ENST00000550391 MTRQ99707 1265 aa15.76■□□□□ 0.11
CACNB3-216ENST00000550391 KBTBD4Q9NVX7 518 aa15.76■□□□□ 0.11
CACNB3-216ENST00000550391 GABBR1Q9UBS5 961 aa15.76■□□□□ 0.11
CACNB3-216ENST00000550391 FAM184BQ9ULE4 1060 aa15.76■□□□□ 0.11
CACNB3-216ENST00000550391 GNEQ9Y223 722 aaKnown RBP15.76■□□□□ 0.11
CACNB3-216ENST00000550391 IGSF9BQ9UPX0 1349 aa15.75■□□□□ 0.11
CACNB3-216ENST00000550391 NOP56O00567 594 aaKnown RBP15.75■□□□□ 0.11
CACNB3-216ENST00000550391 HMGCRP04035 888 aa15.75■□□□□ 0.11
CACNB3-216ENST00000550391 AKR1A1P14550 325 aa15.75■□□□□ 0.11
CACNB3-216ENST00000550391 ELNP15502 786 aa15.75■□□□□ 0.11
CACNB3-216ENST00000550391 TCF7P36402 384 aaPredicted RBP15.75■□□□□ 0.11
CACNB3-216ENST00000550391 PSMC6P62333 389 aa15.75■□□□□ 0.11
CACNB3-216ENST00000550391 AMPD3Q01432 767 aa15.75■□□□□ 0.11
CACNB3-216ENST00000550391 CACNB2Q08289 660 aaPredicted RBP15.75■□□□□ 0.11
CACNB3-216ENST00000550391 MCM6Q14566 821 aa15.75■□□□□ 0.11
CACNB3-216ENST00000550391 POSTNQ15063 836 aa15.75■□□□□ 0.11
CACNB3-216ENST00000550391 SWSAP1Q6NVH7 229 aa15.75■□□□□ 0.11
CACNB3-216ENST00000550391 SV2BQ7L1I2 683 aa15.75■□□□□ 0.11
CACNB3-216ENST00000550391 CCDC60Q8IWA6 550 aaPredicted RBP15.75■□□□□ 0.11
CACNB3-216ENST00000550391 C4orf19Q8IY42 314 aa15.75■□□□□ 0.11
CACNB3-216ENST00000550391 ATP6V0A1Q93050 837 aa15.75■□□□□ 0.11
CACNB3-216ENST00000550391 PCYT2Q99447 389 aa15.75■□□□□ 0.11
CACNB3-216ENST00000550391 LRRC27Q9C0I9 530 aa15.75■□□□□ 0.11
CACNB3-216ENST00000550391 Q9Y3F1 56 aa15.75■□□□□ 0.11
CACNB3-216ENST00000550391 LOXHD1Q8IVV2 1947 aa15.74■□□□□ 0.11
CACNB3-216ENST00000550391 BACH1O14867 736 aa15.74■□□□□ 0.11
CACNB3-216ENST00000550391 GTPBP6O43824 516 aaPredicted RBP15.74■□□□□ 0.11
CACNB3-216ENST00000550391 LGR5O75473 907 aa15.74■□□□□ 0.11
CACNB3-216ENST00000550391 EYA4O95677 639 aa15.74■□□□□ 0.11
CACNB3-216ENST00000550391 MYL1P05976 194 aa15.74■□□□□ 0.11
CACNB3-216ENST00000550391 PLA2G4BP0C869 781 aa15.74■□□□□ 0.11
CACNB3-216ENST00000550391 XRCC6P12956 609 aaKnown RBP eCLIP15.74■□□□□ 0.11
CACNB3-216ENST00000550391 MTFR1Q15390 333 aa15.74■□□□□ 0.11
CACNB3-216ENST00000550391 MAP3K21Q5TCX8 1036 aa15.74■□□□□ 0.11
CACNB3-216ENST00000550391 FAM160B1Q5W0V3 765 aa15.74■□□□□ 0.11
CACNB3-216ENST00000550391 CKAP2LQ8IYA6 745 aa15.74■□□□□ 0.11
CACNB3-216ENST00000550391 GRAMD1CQ8IYS0 662 aa15.74■□□□□ 0.11
CACNB3-216ENST00000550391 SLAIN1Q8ND83 568 aa15.74■□□□□ 0.11
CACNB3-216ENST00000550391 OR6J1Q8NGC5 347 aa15.74■□□□□ 0.11
CACNB3-216ENST00000550391 PPTC7Q8NI37 304 aa15.74■□□□□ 0.11
CACNB3-216ENST00000550391 AFAP1L1Q8TED9 768 aa15.74■□□□□ 0.11
CACNB3-216ENST00000550391 STAMQ92783 540 aa15.74■□□□□ 0.11
CACNB3-216ENST00000550391 GDF15Q99988 308 aa15.74■□□□□ 0.11
CACNB3-216ENST00000550391 ZNF302Q9NR11 478 aa15.74■□□□□ 0.11
CACNB3-216ENST00000550391 KIAA1468Q9P260 1216 aa15.74■□□□□ 0.11
CACNB3-216ENST00000550391 MAFBQ9Y5Q3 323 aaPredicted RBP15.74■□□□□ 0.11
CACNB3-216ENST00000550391 MYH9P35579 1960 aaKnown RBP15.74■□□□□ 0.11
CACNB3-216ENST00000550391 EMSYQ7Z589 1322 aa15.73■□□□□ 0.11
CACNB3-216ENST00000550391 A0A087WWV3 80 aa15.73■□□□□ 0.11
CACNB3-216ENST00000550391 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.73■□□□□ 0.11
CACNB3-216ENST00000550391 SYCE3A1L190 88 aa15.73■□□□□ 0.11
CACNB3-216ENST00000550391 ZNF862O60290 1169 aa15.73■□□□□ 0.11
CACNB3-216ENST00000550391 STBD1O95210 358 aa15.73■□□□□ 0.11
CACNB3-216ENST00000550391 SMC2O95347 1197 aa15.73■□□□□ 0.11
CACNB3-216ENST00000550391 PRR29P0C7W0 189 aa15.73■□□□□ 0.11
CACNB3-216ENST00000550391 PLA2G5P39877 138 aa15.73■□□□□ 0.11
CACNB3-216ENST00000550391 SLC12A3P55017 1021 aa15.73■□□□□ 0.11
CACNB3-216ENST00000550391 PNOCQ13519 176 aa15.73■□□□□ 0.11
CACNB3-216ENST00000550391 SYT2Q8N9I0 419 aaPredicted RBP15.73■□□□□ 0.11
CACNB3-216ENST00000550391 PIGOQ8TEQ8 1089 aa15.73■□□□□ 0.11
CACNB3-216ENST00000550391 AFG1LQ8WV93 481 aa15.73■□□□□ 0.11
CACNB3-216ENST00000550391 C7orf25Q9BPX7 421 aa15.73■□□□□ 0.11
CACNB3-216ENST00000550391 ZBTB39O15060 712 aa15.72■□□□□ 0.11
CACNB3-216ENST00000550391 SEPT4O43236 478 aa15.72■□□□□ 0.11
CACNB3-216ENST00000550391 DYNC1LI2O43237 492 aaPredicted RBP15.72■□□□□ 0.11
CACNB3-216ENST00000550391 SSBP05455 408 aaKnown RBP eCLIP15.72■□□□□ 0.11
CACNB3-216ENST00000550391 HOXD8P13378 290 aaPredicted RBP15.72■□□□□ 0.11
CACNB3-216ENST00000550391 PRKAR2AP13861 404 aaKnown RBP15.72■□□□□ 0.11
CACNB3-216ENST00000550391 ATP4AP20648 1035 aa15.72■□□□□ 0.11
CACNB3-216ENST00000550391 STAT5BP51692 787 aa15.72■□□□□ 0.11
CACNB3-216ENST00000550391 ZNF445P59923 1031 aa15.72■□□□□ 0.11
CACNB3-216ENST00000550391 DPYDQ12882 1025 aa15.72■□□□□ 0.11
CACNB3-216ENST00000550391 DHX8Q14562 1220 aaKnown RBP15.72■□□□□ 0.11
CACNB3-216ENST00000550391 PLPPR4Q7Z2D5 763 aa15.72■□□□□ 0.11
CACNB3-216ENST00000550391 TLK2Q86UE8 772 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms