RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 XRRA1Q6P2D8 792 aa8.79□□□□□ -1
NEK3-201ENST00000550331 TMCO2Q7Z6W1 182 aaPredicted RBP8.79□□□□□ -1
NEK3-201ENST00000550331 MB21D2Q8IYB1 491 aaPredicted RBP8.79□□□□□ -1
NEK3-201ENST00000550331 CTCFLQ8NI51 663 aaPredicted RBP8.79□□□□□ -1
NEK3-201ENST00000550331 IGDCC4Q8TDY8 1250 aa8.79□□□□□ -1
NEK3-201ENST00000550331 GPKOWQ92917 476 aaPredicted RBP eCLIP8.79□□□□□ -1
NEK3-201ENST00000550331 MAP4K1Q92918 833 aa8.79□□□□□ -1
NEK3-201ENST00000550331 ATP6V0A1Q93050 837 aa8.79□□□□□ -1
NEK3-201ENST00000550331 TGS1Q96RS0 853 aaKnown RBP8.79□□□□□ -1
NEK3-201ENST00000550331 SPSB2Q99619 263 aa8.79□□□□□ -1
NEK3-201ENST00000550331 SPZ1Q9BXG8 430 aa8.79□□□□□ -1
NEK3-201ENST00000550331 SUGCTQ9HAC7 445 aa8.79□□□□□ -1
NEK3-201ENST00000550331 FCF1Q9Y324 198 aaKnown RBP8.79□□□□□ -1
NEK3-201ENST00000550331 INSL6Q9Y581 213 aa8.79□□□□□ -1
NEK3-201ENST00000550331 TAF6LQ9Y6J9 622 aa8.79□□□□□ -1
NEK3-201ENST00000550331 LINC01553A4QN01 128 aa8.78□□□□□ -1
NEK3-201ENST00000550331 WNT7AO00755 349 aa8.78□□□□□ -1
NEK3-201ENST00000550331 SORBS3O60504 671 aa8.78□□□□□ -1
NEK3-201ENST00000550331 AMHP03971 560 aa8.78□□□□□ -1
NEK3-201ENST00000550331 GNAT1P11488 350 aa8.78□□□□□ -1
NEK3-201ENST00000550331 KCNA5P22460 613 aa8.78□□□□□ -1
NEK3-201ENST00000550331 GNAQP50148 359 aa8.78□□□□□ -1
NEK3-201ENST00000550331 LEXMQ3ZCV2 418 aa8.78□□□□□ -1
NEK3-201ENST00000550331 PLEKHG4Q58EX7 1191 aa8.78□□□□□ -1
NEK3-201ENST00000550331 PCNX4Q63HM2 1172 aa8.78□□□□□ -1
NEK3-201ENST00000550331 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.78□□□□□ -1
NEK3-201ENST00000550331 ZNF654Q8IZM8 581 aa8.78□□□□□ -1
NEK3-201ENST00000550331 GIMAP8Q8ND71 665 aaPredicted RBP8.78□□□□□ -1
NEK3-201ENST00000550331 DBF4BQ8NFT6 615 aa8.78□□□□□ -1
NEK3-201ENST00000550331 SMARCC2Q8TAQ2 1214 aa8.78□□□□□ -1
NEK3-201ENST00000550331 SEPT8Q92599 483 aa8.78□□□□□ -1
NEK3-201ENST00000550331 CUL5Q93034 780 aa8.78□□□□□ -1
NEK3-201ENST00000550331 RRP36Q96EU6 259 aaKnown RBP8.78□□□□□ -1
NEK3-201ENST00000550331 FBXL18Q96ME1 805 aa8.78□□□□□ -1
NEK3-201ENST00000550331 GPR20Q99678 358 aa8.78□□□□□ -1
NEK3-201ENST00000550331 SENP7Q9BQF6 1050 aa8.78□□□□□ -1
NEK3-201ENST00000550331 LZTS2Q9BRK4 669 aa8.78□□□□□ -1
NEK3-201ENST00000550331 LY9Q9HBG7 655 aa8.78□□□□□ -1
NEK3-201ENST00000550331 SEC63Q9UGP8 760 aaKnown RBP8.78□□□□□ -1
NEK3-201ENST00000550331 ZNF215Q9UL58 517 aaPredicted RBP8.78□□□□□ -1
NEK3-201ENST00000550331 MTUS1Q9ULD2 1270 aa8.78□□□□□ -1
NEK3-201ENST00000550331 COL4A6Q14031 1691 aa8.78□□□□□ -1
NEK3-201ENST00000550331 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.77□□□□□ -1.01
NEK3-201ENST00000550331 GRXCR2A6NFK2 248 aa8.77□□□□□ -1.01
NEK3-201ENST00000550331 TREHO43280 583 aa8.77□□□□□ -1.01
NEK3-201ENST00000550331 IL9P15248 144 aa8.77□□□□□ -1.01
NEK3-201ENST00000550331 MCM5P33992 734 aa8.77□□□□□ -1.01
NEK3-201ENST00000550331 HTRA4P83105 476 aaPredicted RBP8.77□□□□□ -1.01
NEK3-201ENST00000550331 SEMA3FQ13275 785 aa8.77□□□□□ -1.01
NEK3-201ENST00000550331 PTCRAQ6ISU1 281 aaPredicted RBP8.77□□□□□ -1.01
NEK3-201ENST00000550331 CASC1Q6TDU7 716 aa8.77□□□□□ -1.01
NEK3-201ENST00000550331 CYFIP1Q7L576 1253 aa8.77□□□□□ -1.01
NEK3-201ENST00000550331 NLRX1Q86UT6 975 aa8.77□□□□□ -1.01
NEK3-201ENST00000550331 SCUBE3Q8IX30 993 aa8.77□□□□□ -1.01
NEK3-201ENST00000550331 MYOCDQ8IZQ8 938 aa8.77□□□□□ -1.01
NEK3-201ENST00000550331 TMTC2Q8N394 836 aa8.77□□□□□ -1.01
NEK3-201ENST00000550331 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.77□□□□□ -1.01
NEK3-201ENST00000550331 APBB2Q92870 758 aa8.77□□□□□ -1.01
NEK3-201ENST00000550331 CDHR1Q96JP9 859 aa8.77□□□□□ -1.01
NEK3-201ENST00000550331 TMEM87BQ96K49 555 aa8.77□□□□□ -1.01
NEK3-201ENST00000550331 SAMD11Q96NU1 681 aa8.77□□□□□ -1.01
NEK3-201ENST00000550331 KCNH6Q9H252 994 aa8.77□□□□□ -1.01
NEK3-201ENST00000550331 RNPEPQ9H4A4 650 aa8.77□□□□□ -1.01
NEK3-201ENST00000550331 BCAS3Q9H6U6 928 aa8.77□□□□□ -1.01
NEK3-201ENST00000550331 RTEL1Q9NZ71 1219 aa8.77□□□□□ -1.01
NEK3-201ENST00000550331 SUPT16HQ9Y5B9 1047 aaKnown RBP8.77□□□□□ -1.01
NEK3-201ENST00000550331 RBM8AQ9Y5S9 174 aaKnown RBP8.77□□□□□ -1.01
NEK3-201ENST00000550331 NRCAMQ92823 1304 aa8.77□□□□□ -1.01
NEK3-201ENST00000550331 MEIS2O14770 477 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 DCXO43602 365 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 PRC1O43663 620 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 CTSHP09668 335 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 CALM1P0DP23 149 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 CALM2P0DP24 149 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 CALM3P0DP25 149 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 LIFRP42702 1097 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 ADAM17P78536 824 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 FAM26DQ5JW98 314 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 FAM117BQ6P1L5 589 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 TAF2Q6P1X5 1199 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 USP17L6PQ6QN14 398 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 RPAINQ86UA6 219 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 TRIM50Q86XT4 487 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 LMBR1Q8WVP7 490 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 PIBF1Q8WXW3 757 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 TOP1MTQ969P6 601 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 GPRASP2Q96D09 838 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 MYL10Q9BUA6 226 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 KRTAP4-8Q9BYQ9 185 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 SETD4Q9NVD3 440 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 KIAA1217Q5T5P2 1943 aa8.76□□□□□ -1.01
NEK3-201ENST00000550331 MICAL3Q7RTP6 2002 aa8.75□□□□□ -1.01
NEK3-201ENST00000550331 NLRC5Q86WI3 1866 aa8.75□□□□□ -1.01
NEK3-201ENST00000550331 MYO7AQ13402 2215 aa8.75□□□□□ -1.01
NEK3-201ENST00000550331 CCDC69A6NI79 296 aa8.75□□□□□ -1.01
NEK3-201ENST00000550331 SH2B2O14492 632 aaPredicted RBP8.75□□□□□ -1.01
NEK3-201ENST00000550331 RPLP2P05387 115 aaKnown RBP8.75□□□□□ -1.01
NEK3-201ENST00000550331 KCNA2P16389 499 aa8.75□□□□□ -1.01
NEK3-201ENST00000550331 TCF7P36402 384 aaPredicted RBP8.75□□□□□ -1.01
NEK3-201ENST00000550331 ARHGAP4P98171 946 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms