RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 PCDHA12Q9UN75 941 aa13.4□□□□□ -0.26
PFDN5-208ENST00000549995 PPME1Q9Y570 386 aa13.4□□□□□ -0.26
PFDN5-208ENST00000549995 EVPLQ92817 2033 aa13.4□□□□□ -0.26
PFDN5-208ENST00000549995 UMODL1Q5DID0 1318 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 PTPRSQ13332 1948 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 BACH1O14867 736 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 TREHO43280 583 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 CHMP2AO43633 222 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 DKC1O60832 514 aaKnown RBP eCLIP13.39□□□□□ -0.27
PFDN5-208ENST00000549995 PARNO95453 639 aaKnown RBP13.39□□□□□ -0.27
PFDN5-208ENST00000549995 CYP2C9P11712 490 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 MUTP22033 750 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 MARK3P27448 753 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 PSMC5P62195 406 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 ZNF200P98182 395 aaPredicted RBP13.39□□□□□ -0.27
PFDN5-208ENST00000549995 PRKCEQ02156 737 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 NBR1Q14596 966 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 ZNF174Q15697 407 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 FAM26DQ5JW98 314 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 ARL6IP4Q66PJ3 421 aaKnown RBP13.39□□□□□ -0.27
PFDN5-208ENST00000549995 MCTP1Q6DN14 999 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 TAF2Q6P1X5 1199 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 C4orf19Q8IY42 314 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 PPP1R13LQ8WUF5 828 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 UIMC1Q96RL1 719 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 NIFKQ9BYG3 293 aaKnown RBP13.39□□□□□ -0.27
PFDN5-208ENST00000549995 ZSCAN16Q9H4T2 348 aaPredicted RBP13.39□□□□□ -0.27
PFDN5-208ENST00000549995 SETD4Q9NVD3 440 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 TUBE1Q9UJT0 475 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 CEP131Q9UPN4 1083 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 PCDHA2Q9Y5H9 948 aa13.39□□□□□ -0.27
PFDN5-208ENST00000549995 IGKV6-21A0A0C4DH24 114 aa13.38□□□□□ -0.27
PFDN5-208ENST00000549995 SMIM35A0A1B0GVV1 85 aa13.38□□□□□ -0.27
PFDN5-208ENST00000549995 VPS37CA5D8V6 355 aaPredicted RBP13.38□□□□□ -0.27
PFDN5-208ENST00000549995 C22orf31O95567 290 aa13.38□□□□□ -0.27
PFDN5-208ENST00000549995 BMP15O95972 392 aa13.38□□□□□ -0.27
PFDN5-208ENST00000549995 CXCL10P02778 98 aa13.38□□□□□ -0.27
PFDN5-208ENST00000549995 CKBP12277 381 aa13.38□□□□□ -0.27
PFDN5-208ENST00000549995 QARSP47897 775 aaKnown RBP13.38□□□□□ -0.27
PFDN5-208ENST00000549995 MGAT3Q09327 533 aa13.38□□□□□ -0.27
PFDN5-208ENST00000549995 PTGDRQ13258 359 aa13.38□□□□□ -0.27
PFDN5-208ENST00000549995 PDIA5Q14554 519 aa13.38□□□□□ -0.27
PFDN5-208ENST00000549995 XKR3Q5GH77 459 aa13.38□□□□□ -0.27
PFDN5-208ENST00000549995 TET1Q8NFU7 2136 aa13.38□□□□□ -0.27
PFDN5-208ENST00000549995 BADQ92934 168 aa13.38□□□□□ -0.27
PFDN5-208ENST00000549995 POLR3CQ9BUI4 534 aaPredicted RBP13.38□□□□□ -0.27
PFDN5-208ENST00000549995 WRAP73Q9P2S5 460 aaPredicted RBP13.38□□□□□ -0.27
PFDN5-208ENST00000549995 TRPC6Q9Y210 931 aa13.38□□□□□ -0.27
PFDN5-208ENST00000549995 SAMM50Q9Y512 469 aa13.38□□□□□ -0.27
PFDN5-208ENST00000549995 MICAL3Q7RTP6 2002 aa13.38□□□□□ -0.27
PFDN5-208ENST00000549995 KDM3AQ9Y4C1 1321 aa13.38□□□□□ -0.27
PFDN5-208ENST00000549995 SLITRK3O94933 977 aa13.37□□□□□ -0.27
PFDN5-208ENST00000549995 PFKMP08237 780 aa13.37□□□□□ -0.27
PFDN5-208ENST00000549995 IQCF3P0C7M6 154 aa13.37□□□□□ -0.27
PFDN5-208ENST00000549995 SELPP16109 830 aa13.37□□□□□ -0.27
PFDN5-208ENST00000549995 CYP2C18P33260 490 aa13.37□□□□□ -0.27
PFDN5-208ENST00000549995 TXKP42681 527 aa13.37□□□□□ -0.27
PFDN5-208ENST00000549995 FPGSQ05932 587 aa13.37□□□□□ -0.27
PFDN5-208ENST00000549995 PPIGQ13427 754 aaKnown RBP eCLIP13.37□□□□□ -0.27
PFDN5-208ENST00000549995 GPNMBQ14956 572 aa13.37□□□□□ -0.27
PFDN5-208ENST00000549995 RASIP1Q5U651 963 aa13.37□□□□□ -0.27
PFDN5-208ENST00000549995 MTHFD1LQ6UB35 978 aa13.37□□□□□ -0.27
PFDN5-208ENST00000549995 ANO5Q75V66 913 aa13.37□□□□□ -0.27
PFDN5-208ENST00000549995 TMEM199Q8N511 208 aa13.37□□□□□ -0.27
PFDN5-208ENST00000549995 EIF2AK1Q9BQI3 630 aaKnown RBP13.37□□□□□ -0.27
PFDN5-208ENST00000549995 LXNQ9BS40 222 aa13.37□□□□□ -0.27
PFDN5-208ENST00000549995 TUFT1Q9NNX1 390 aa13.37□□□□□ -0.27
PFDN5-208ENST00000549995 NOD1Q9Y239 953 aa13.37□□□□□ -0.27
PFDN5-208ENST00000549995 STK24Q9Y6E0 443 aa13.37□□□□□ -0.27
PFDN5-208ENST00000549995 POTEMA6NI47 508 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 SPATA31C1P0DKV0 1188 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 XRCC6P12956 609 aaKnown RBP eCLIP13.36□□□□□ -0.27
PFDN5-208ENST00000549995 ATP2B1P20020 1258 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 RPA1P27694 616 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 BECN1Q14457 450 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 MBTPS1Q14703 1052 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 PTPAQ15257 358 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 IL17AQ16552 155 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 NCAPH2Q6IBW4 605 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 RUFY4Q6ZNE9 571 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 FAM43BQ6ZT52 329 aaPredicted RBP13.36□□□□□ -0.27
PFDN5-208ENST00000549995 LRRC8DQ7L1W4 858 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 C16orf59Q7L2K0 433 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 FERMT3Q86UX7 667 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 KCTD17Q8N5Z5 321 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 BANK1Q8NDB2 785 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 LBHD1Q9BQE6 289 aaPredicted RBP13.36□□□□□ -0.27
PFDN5-208ENST00000549995 PPP1R12CQ9BZL4 782 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 ZSWIM4Q9H7M6 989 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 IL23AQ9NPF7 189 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 NRBP2Q9NSY0 501 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 FOXD4L1Q9NU39 408 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 SQORQ9Y6N5 450 aa13.36□□□□□ -0.27
PFDN5-208ENST00000549995 MAGEB2O15479 319 aa13.35□□□□□ -0.27
PFDN5-208ENST00000549995 SLC26A4O43511 780 aa13.35□□□□□ -0.27
PFDN5-208ENST00000549995 MARCH6O60337 910 aa13.35□□□□□ -0.27
PFDN5-208ENST00000549995 ZSCAN22P10073 491 aaPredicted RBP13.35□□□□□ -0.27
PFDN5-208ENST00000549995 CSF2RAP15509 400 aa13.35□□□□□ -0.27
PFDN5-208ENST00000549995 DDIT3P35638 169 aa13.35□□□□□ -0.27
PFDN5-208ENST00000549995 EPHB4P54760 987 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms