RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 TICAM2Q86XR7 235 aa12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 ADSSL1Q8N142 457 aa12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 GIMAP8Q8ND71 665 aaPredicted RBP12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 GLG1Q92896 1179 aa12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 NKD2Q969F2 451 aaPredicted RBP12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 RILPL2Q969X0 211 aa12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 CDCA3Q99618 268 aaPredicted RBP12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 SENP7Q9BQF6 1050 aa12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 AAASQ9NRG9 546 aa12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 TMEM260Q9NX78 707 aa12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 PCDHB7Q9Y5E2 793 aa12.46□□□□□ -0.41
TRAFD1-206ENST00000549358 MYO7AQ13402 2215 aa12.46□□□□□ -0.42
TRAFD1-206ENST00000549358 PLXNA3P51805 1871 aa12.46□□□□□ -0.42
TRAFD1-206ENST00000549358 GSTTP1A0A1W2PQM5 241 aa12.45□□□□□ -0.42
TRAFD1-206ENST00000549358 FSD2A1L4K1 749 aa12.45□□□□□ -0.42
TRAFD1-206ENST00000549358 M0QZ92 97 aa12.45□□□□□ -0.42
TRAFD1-206ENST00000549358 ATP9AO75110 1047 aa12.45□□□□□ -0.42
TRAFD1-206ENST00000549358 BRD1O95696 1058 aa12.45□□□□□ -0.42
TRAFD1-206ENST00000549358 KCNC3Q14003 757 aa12.45□□□□□ -0.42
TRAFD1-206ENST00000549358 SLC35G1Q2M3R5 365 aa12.45□□□□□ -0.42
TRAFD1-206ENST00000549358 SYCE2Q6PIF2 218 aa12.45□□□□□ -0.42
TRAFD1-206ENST00000549358 TMEM184AQ6ZMB5 413 aa12.45□□□□□ -0.42
TRAFD1-206ENST00000549358 UBALD2Q8IYN6 164 aa12.45□□□□□ -0.42
TRAFD1-206ENST00000549358 THNSL1Q8IYQ7 743 aa12.45□□□□□ -0.42
TRAFD1-206ENST00000549358 SEPT1Q8WYJ6 367 aa12.45□□□□□ -0.42
TRAFD1-206ENST00000549358 KRT23Q9C075 422 aa12.45□□□□□ -0.42
TRAFD1-206ENST00000549358 TMX1Q9H3N1 280 aa12.45□□□□□ -0.42
TRAFD1-206ENST00000549358 SMOC2Q9H3U7 446 aa12.45□□□□□ -0.42
TRAFD1-206ENST00000549358 RIOX1Q9H6W3 641 aa12.45□□□□□ -0.42
TRAFD1-206ENST00000549358 SORCS3Q9UPU3 1222 aa12.45□□□□□ -0.42
TRAFD1-206ENST00000549358 SQORQ9Y6N5 450 aa12.45□□□□□ -0.42
TRAFD1-206ENST00000549358 DCHS1Q96JQ0 3298 aa12.45□□□□□ -0.42
TRAFD1-206ENST00000549358 FRMPD4Q14CM0 1322 aa12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 PNMA6FA0A0J9YX94 578 aa12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 TBKBP1A7MCY6 615 aa12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 INSRRP14616 1297 aa12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 SDSP20132 328 aa12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 APOBRQ0VD83 1088 aa12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 NFX1Q12986 1120 aaKnown RBP12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 IMMTQ16891 758 aaKnown RBP12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 TMEM266Q2M3C6 531 aa12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 FAM102BQ5T8I3 360 aa12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 PCNX4Q63HM2 1172 aa12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 PDE12Q6L8Q7 609 aaKnown RBP12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 NLRX1Q86UT6 975 aa12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 SMARCC2Q8TAQ2 1214 aa12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 PIBF1Q8WXW3 757 aa12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 CELF4Q9BZC1 486 aaKnown RBP12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 SMARCAD1Q9H4L7 1026 aa12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 TYW1Q9NV66 732 aaKnown RBP12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 CDH22Q9UJ99 828 aa12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 NR2E1Q9Y466 385 aa12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 TRPV2Q9Y5S1 764 aa12.44□□□□□ -0.42
TRAFD1-206ENST00000549358 IGSF9BQ9UPX0 1349 aa12.43□□□□□ -0.42
TRAFD1-206ENST00000549358 FSCN2O14926 492 aa12.43□□□□□ -0.42
TRAFD1-206ENST00000549358 CYTH3O43739 400 aa12.43□□□□□ -0.42
TRAFD1-206ENST00000549358 RPLP2P05387 115 aaKnown RBP12.43□□□□□ -0.42
TRAFD1-206ENST00000549358 SARSP49591 514 aaKnown RBP12.43□□□□□ -0.42
TRAFD1-206ENST00000549358 SEC23AQ15436 765 aa12.43□□□□□ -0.42
TRAFD1-206ENST00000549358 PLPP4Q5VZY2 271 aa12.43□□□□□ -0.42
TRAFD1-206ENST00000549358 ASTLQ6HA08 431 aaPredicted RBP12.43□□□□□ -0.42
TRAFD1-206ENST00000549358 USP17L6PQ6QN14 398 aa12.43□□□□□ -0.42
TRAFD1-206ENST00000549358 CWC27Q6UX04 472 aaKnown RBP12.43□□□□□ -0.42
TRAFD1-206ENST00000549358 TCF25Q9BQ70 676 aa12.43□□□□□ -0.42
TRAFD1-206ENST00000549358 MFSD1Q9H3U5 465 aa12.43□□□□□ -0.42
TRAFD1-206ENST00000549358 CNNM2Q9H8M5 875 aa12.43□□□□□ -0.42
TRAFD1-206ENST00000549358 PKD2L1Q9P0L9 805 aa12.43□□□□□ -0.42
TRAFD1-206ENST00000549358 HCSTQ9UBK5 93 aa12.43□□□□□ -0.42
TRAFD1-206ENST00000549358 KIAA1671Q9BY89 1806 aa12.43□□□□□ -0.42
TRAFD1-206ENST00000549358 MYH6P13533 1939 aa12.43□□□□□ -0.42
TRAFD1-206ENST00000549358 PLXNA4Q9HCM2 1894 aa12.42□□□□□ -0.42
TRAFD1-206ENST00000549358 TTC3P53804 2025 aa12.42□□□□□ -0.42
TRAFD1-206ENST00000549358 RRN3P2A6NIE6 340 aa12.42□□□□□ -0.42
TRAFD1-206ENST00000549358 HIDE1A8MVS5 230 aa12.42□□□□□ -0.42
TRAFD1-206ENST00000549358 C2CD4DB7Z1M9 353 aa12.42□□□□□ -0.42
TRAFD1-206ENST00000549358 KCNA2P16389 499 aa12.42□□□□□ -0.42
TRAFD1-206ENST00000549358 HOXB8P17481 243 aaPredicted RBP12.42□□□□□ -0.42
TRAFD1-206ENST00000549358 KRT76Q01546 638 aa12.42□□□□□ -0.42
TRAFD1-206ENST00000549358 GRM4Q14833 912 aa12.42□□□□□ -0.42
TRAFD1-206ENST00000549358 MCTP2Q6DN12 878 aa12.42□□□□□ -0.42
TRAFD1-206ENST00000549358 XRRA1Q6P2D8 792 aa12.42□□□□□ -0.42
TRAFD1-206ENST00000549358 CYB5R4Q7L1T6 521 aa12.42□□□□□ -0.42
TRAFD1-206ENST00000549358 COLGALT1Q8NBJ5 622 aa12.42□□□□□ -0.42
TRAFD1-206ENST00000549358 RASGRP4Q8TDF6 673 aa12.42□□□□□ -0.42
TRAFD1-206ENST00000549358 TRAPPC12Q8WVT3 735 aa12.42□□□□□ -0.42
TRAFD1-206ENST00000549358 ENTPD7Q9NQZ7 604 aa12.42□□□□□ -0.42
TRAFD1-206ENST00000549358 PUF60Q9UHX1 559 aaKnown RBP12.42□□□□□ -0.42
TRAFD1-206ENST00000549358 PCDHA2Q9Y5H9 948 aa12.42□□□□□ -0.42
TRAFD1-206ENST00000549358 VPS13AQ96RL7 3174 aa12.41□□□□□ -0.42
TRAFD1-206ENST00000549358 MGEA5O60502 916 aa12.41□□□□□ -0.42
TRAFD1-206ENST00000549358 ASGR2P07307 311 aa12.41□□□□□ -0.42
TRAFD1-206ENST00000549358 CLCN5P51795 746 aa12.41□□□□□ -0.42
TRAFD1-206ENST00000549358 CES5AQ6NT32 575 aa12.41□□□□□ -0.42
TRAFD1-206ENST00000549358 MRPS27Q92552 414 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-206ENST00000549358 CUL5Q93034 780 aa12.41□□□□□ -0.42
TRAFD1-206ENST00000549358 CDHR1Q96JP9 859 aa12.41□□□□□ -0.42
TRAFD1-206ENST00000549358 ADAM2Q99965 735 aa12.41□□□□□ -0.42
TRAFD1-206ENST00000549358 ADAM7Q9H2U9 754 aa12.41□□□□□ -0.42
TRAFD1-206ENST00000549358 POMKQ9H5K3 350 aa12.41□□□□□ -0.42
TRAFD1-206ENST00000549358 RGS18Q9NS28 235 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms