RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	ZNF862	O60290	1169 aa		13.65	□□□□□ -0.22
ERBB3-208	ENST00000549205	DUSP11	O75319	330 aa	Known RBP	13.65	□□□□□ -0.22
ERBB3-208	ENST00000549205	MYL1	P05976	194 aa		13.65	□□□□□ -0.22
ERBB3-208	ENST00000549205	PRR29	P0C7W0	189 aa		13.65	□□□□□ -0.22
ERBB3-208	ENST00000549205	PLA2G4B	P0C869	781 aa		13.65	□□□□□ -0.22
ERBB3-208	ENST00000549205	XRCC6	P12956	609 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
ERBB3-208	ENST00000549205	HOXD8	P13378	290 aa	Predicted RBP	13.65	□□□□□ -0.22
ERBB3-208	ENST00000549205	GRK4	P32298	578 aa		13.65	□□□□□ -0.22
ERBB3-208	ENST00000549205	SLC12A3	P55017	1021 aa		13.65	□□□□□ -0.22
ERBB3-208	ENST00000549205	AMPD3	Q01432	767 aa		13.65	□□□□□ -0.22
ERBB3-208	ENST00000549205	PNOC	Q13519	176 aa		13.65	□□□□□ -0.22
ERBB3-208	ENST00000549205	TLK2	Q86UE8	772 aa		13.65	□□□□□ -0.22
ERBB3-208	ENST00000549205	PIGO	Q8TEQ8	1089 aa		13.65	□□□□□ -0.22
ERBB3-208	ENST00000549205	STAM	Q92783	540 aa		13.65	□□□□□ -0.22
ERBB3-208	ENST00000549205	ANP32E	Q9BTT0	268 aa		13.65	□□□□□ -0.22
ERBB3-208	ENST00000549205	AP5M1	Q9H0R1	490 aa		13.65	□□□□□ -0.22
ERBB3-208	ENST00000549205	AZI2	Q9H6S1	392 aa		13.65	□□□□□ -0.22
ERBB3-208	ENST00000549205	DBR1	Q9UK59	544 aa	Known RBP	13.65	□□□□□ -0.22
ERBB3-208	ENST00000549205	PTPN22	Q9Y2R2	807 aa		13.65	□□□□□ -0.22
ERBB3-208	ENST00000549205		A0A087WWV3	80 aa		13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205		A6NJR5	290 aa		13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	ZBTB39	O15060	712 aa		13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	DYNC1LI2	O43237	492 aa	Predicted RBP	13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	PPFIA4	O75335	1185 aa		13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	STBD1	O95210	358 aa		13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	INHA	P05111	366 aa		13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	SSB	P05455	408 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	MMP3	P08254	477 aa		13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	CNGA1	P29973	690 aa		13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	CCND3	P30281	292 aa	Predicted RBP	13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	YWHAB	P31946	246 aa	Known RBP	13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	STAT5B	P51692	787 aa		13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	PRKCE	Q02156	737 aa		13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	DPYD	Q12882	1025 aa		13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	DHX8	Q14562	1220 aa	Known RBP	13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	UTP14C	Q5TAP6	766 aa	Known RBP	13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	PLPPR4	Q7Z2D5	763 aa		13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	CKAP2L	Q8IYA6	745 aa		13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	SYT2	Q8N9I0	419 aa	Predicted RBP	13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	LRRC27	Q9C0I9	530 aa		13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	BHMT2	Q9H2M3	363 aa		13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	ANKEF1	Q9NU02	776 aa		13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	KIAA1468	Q9P260	1216 aa		13.64	□□□□□ -0.23
ERBB3-208	ENST00000549205	BRCA2	P51587	3418 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	SYCE3	A1L190	88 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	MYMK	A6NI61	221 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	SMC2	O95347	1197 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	OAT	P04181	439 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	LGALS2	P05162	132 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	ATP4A	P20648	1035 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	CASP1	P29466	404 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	CPT1A	P50416	773 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	SLC26A2	P50443	739 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	CUL4B	Q13620	913 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	DGKD	Q16760	1214 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	XKR3	Q5GH77	459 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	CNNM4	Q6P4Q7	775 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	ANO5	Q75V66	913 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	OTUD6A	Q7L8S5	288 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	GPBP1	Q86WP2	473 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	TRIM50	Q86XT4	487 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	SPATA20	Q8TB22	786 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	ERCC4	Q92889	916 aa	Predicted RBP	13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	GLG1	Q92896	1179 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	FAM167A	Q96KS9	214 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	C7orf25	Q9BPX7	421 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	TRIM9	Q9C026	710 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	UPF3A	Q9H1J1	476 aa	Known RBP	13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	BLZF1	Q9H2G9	400 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	SMARCAD1	Q9H4L7	1026 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	TUBE1	Q9UJT0	475 aa		13.63	□□□□□ -0.23
ERBB3-208	ENST00000549205	ARHGEF35	A5YM69	484 aa		13.62	□□□□□ -0.23
ERBB3-208	ENST00000549205	HSPA1A	P0DMV8	641 aa	Known RBP	13.62	□□□□□ -0.23
ERBB3-208	ENST00000549205	HSPA1B	P0DMV9	641 aa	Known RBP	13.62	□□□□□ -0.23
ERBB3-208	ENST00000549205	RARB	P10826	455 aa		13.62	□□□□□ -0.23
ERBB3-208	ENST00000549205	CYP11B2	P19099	503 aa		13.62	□□□□□ -0.23
ERBB3-208	ENST00000549205	CTCF	P49711	727 aa	Predicted RBP	13.62	□□□□□ -0.23
ERBB3-208	ENST00000549205	RARRES1	P49788	294 aa		13.62	□□□□□ -0.23
ERBB3-208	ENST00000549205	GJA9	P57773	515 aa		13.62	□□□□□ -0.23
ERBB3-208	ENST00000549205	NKX3-2	P78367	333 aa		13.62	□□□□□ -0.23
ERBB3-208	ENST00000549205	BRDT	Q58F21	947 aa	Predicted RBP	13.62	□□□□□ -0.23
ERBB3-208	ENST00000549205	XKR9	Q5GH70	373 aa		13.62	□□□□□ -0.23
ERBB3-208	ENST00000549205	NT5DC1	Q5TFE4	455 aa		13.62	□□□□□ -0.23
ERBB3-208	ENST00000549205	SMARCE1	Q969G3	411 aa		13.62	□□□□□ -0.23
ERBB3-208	ENST00000549205	CCDC43	Q96MW1	224 aa	Known RBP	13.62	□□□□□ -0.23
ERBB3-208	ENST00000549205	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.62	□□□□□ -0.23
ERBB3-208	ENST00000549205	KCND2	Q9NZV8	630 aa		13.62	□□□□□ -0.23
ERBB3-208	ENST00000549205	PCDHA5	Q9Y5H7	936 aa		13.62	□□□□□ -0.23
ERBB3-208	ENST00000549205	SYNRG	Q9UMZ2	1314 aa		13.62	□□□□□ -0.23
ERBB3-208	ENST00000549205	TMEM150B	A6NC51	233 aa		13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	ZNF286B	P0CG31	522 aa		13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	SARS	P49591	514 aa	Known RBP	13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	LBX1	P52954	281 aa		13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	FSCN1	Q16658	493 aa	Known RBP	13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	ARSH	Q5FYA8	562 aa		13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	PLA2G4F	Q68DD2	849 aa		13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	RINT1	Q6NUQ1	792 aa		13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	PADI6	Q6TGC4	694 aa		13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	CTU1	Q7Z7A3	348 aa	Known RBP	13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms