RNA–Protein interactions for RNA: ENST00000549021.5

TGFBR1-206, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2

Gene TGFBR1, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-206ENST00000549021 NYAP2Q9P242 653 aa7.56□□□□□ -1.2
TGFBR1-206ENST00000549021 CLIP2Q9UDT6 1046 aa7.56□□□□□ -1.2
TGFBR1-206ENST00000549021 RCOR1Q9UKL0 485 aa7.56□□□□□ -1.2
TGFBR1-206ENST00000549021 CFAP45Q9UL16 551 aa7.56□□□□□ -1.2
TGFBR1-206ENST00000549021 DDX49Q9Y6V7 483 aaKnown RBP7.56□□□□□ -1.2
TGFBR1-206ENST00000549021 MYH7BA7E2Y1 1941 aa7.56□□□□□ -1.2
TGFBR1-206ENST00000549021 PTPRFP10586 1907 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 KIF28PB7ZC32 967 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 KLRF2D3W0D1 207 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 H7C1D1 291 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 MPHOSPH10O00566 681 aaKnown RBP7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 FIBPO43427 364 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 LILRB5O75023 590 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 GHRHP01286 108 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 PARP1P09874 1014 aaKnown RBP7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 PDHBP11177 359 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 NCLP19338 710 aaKnown RBP7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 COL8A1P27658 744 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 GTF2F1P35269 517 aaKnown RBP eCLIP7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 UBE2HP62256 183 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 TNFAIP1Q13829 316 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 PFKFB3Q16875 520 aaPredicted RBP7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 ABCB5Q2M3G0 1257 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 ASPRV1Q53RT3 343 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 FAM177A1Q8N128 213 aaPredicted RBP7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 ASAP3Q8TDY4 903 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 LEO1Q8WVC0 666 aaPredicted RBP7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 SHISA4Q96DD7 197 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 SPATA32Q96LK8 384 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 RSRP1Q9BUV0 290 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 PHF20Q9BVI0 1012 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 TMEM39BQ9GZU3 492 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 RIOX1Q9H6W3 641 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 SH3GLB2Q9NR46 395 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 DZANK1Q9NVP4 752 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 GPRC5DQ9NZD1 345 aa7.55□□□□□ -1.2
TGFBR1-206ENST00000549021 PAPPA2Q9BXP8 1791 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 hCG_1642624A0A1W2PR95 340 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 J3QW42 95 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 CYTH3O43739 400 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 FBXO24O75426 580 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 SCG2P13521 617 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 EEF2P13639 858 aaKnown RBP7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 CPB1P15086 417 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 ACPPP15309 386 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 YBX3P16989 372 aaKnown RBP eCLIP7.54□□□□□ -1.23e-8■■□□□ 14.3
TGFBR1-206ENST00000549021 GBP2P32456 591 aaPredicted RBP7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 JAG1P78504 1218 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 MLLT1Q03111 559 aaPredicted RBP7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 ZNF543Q08ER8 600 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 TBC1D8BQ0IIM8 1120 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 PAK2Q13177 524 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 RASA3Q14644 834 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 RRP1BQ14684 758 aaKnown RBP7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 SEPT2Q15019 361 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 SAFBQ15424 915 aaKnown RBP eCLIP7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 SLC35G1Q2M3R5 365 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 KIF4BQ2VIQ3 1234 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 TBC1D10BQ4KMP7 808 aaPredicted RBP7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 SV2BQ7L1I2 683 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 CLEC10AQ8IUN9 316 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 SIAH1Q8IUQ4 282 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 GPRASP2Q96D09 838 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 TEPSINQ96N21 525 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 SPON2Q9BUD6 331 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 FOXP1Q9H334 677 aaPredicted RBP7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 CABP5Q9NP86 173 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 RTEL1Q9NZ71 1219 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 HACL1Q9UJ83 578 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 SYNPO2Q9UMS6 1093 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 KCNJ14Q9UNX9 436 aa7.54□□□□□ -1.2
TGFBR1-206ENST00000549021 OTOFQ9HC10 1997 aa7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 WDR90Q96KV7 1748 aa7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 COL11A1P12107 1806 aaPredicted RBP7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 BTBD18B2RXH4 712 aa7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 hCG_1984214I3L0E3 225 aa7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 TRPA1O75762 1119 aa7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 RGS9O75916 674 aaPredicted RBP7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 GDF11O95390 407 aa7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 YEATS4O95619 227 aa7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 GH2P01242 217 aa7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 VEGFAP15692 232 aaPredicted RBP7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 NASPP49321 788 aaPredicted RBP7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 ICA1Q05084 483 aa7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 NPY5RQ15761 445 aa7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 SHROOM1Q2M3G4 852 aaPredicted RBP7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 GPATCH4Q5T3I0 446 aaKnown RBP7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 ELMSAN1Q6PJG2 1045 aa7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 HFE2Q6ZVN8 426 aa7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 APOBEC3FQ8IUX4 373 aaKnown RBP7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 NOSTRINQ8IVI9 506 aa7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 DIS3L2Q8IYB7 885 aaKnown RBP7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 LRRC47Q8N1G4 583 aaKnown RBP7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 ZNF713Q8N859 430 aaPredicted RBP7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 TMEM102Q8N9M5 508 aaPredicted RBP7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 DCAF4Q8WV16 495 aa7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 ARMC5Q96C12 935 aa7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 USP28Q96RU2 1077 aa7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 GINM1Q9NU53 330 aa7.53□□□□□ -1.2
TGFBR1-206ENST00000549021 VPS54Q9P1Q0 977 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms