RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 UGCGQ16739 394 aa17.82■□□□□ 0.44
DDX54-205ENST00000548786 CNKSR3Q6P9H4 555 aa17.82■□□□□ 0.44
DDX54-205ENST00000548786 POTEDQ86YR6 584 aa17.82■□□□□ 0.44
DDX54-205ENST00000548786 ETNPPLQ8TBG4 499 aa17.82■□□□□ 0.44
DDX54-205ENST00000548786 ATP8B4Q8TF62 1192 aa17.82■□□□□ 0.44
DDX54-205ENST00000548786 TNFRSF25Q93038 417 aa17.82■□□□□ 0.44
DDX54-205ENST00000548786 C8orf76Q96K31 380 aa17.82■□□□□ 0.44
DDX54-205ENST00000548786 RIT2Q99578 217 aa17.82■□□□□ 0.44
DDX54-205ENST00000548786 NKX2-4Q9H2Z4 354 aa17.82■□□□□ 0.44
DDX54-205ENST00000548786 SEMA6BQ9H3T3 888 aa17.82■□□□□ 0.44
DDX54-205ENST00000548786 YBX2Q9Y2T7 364 aaKnown RBP17.82■□□□□ 0.44
DDX54-205ENST00000548786 MBLAC1A4D2B0 266 aaPredicted RBP17.81■□□□□ 0.44
DDX54-205ENST00000548786 PSMD10O75832 226 aa17.81■□□□□ 0.44
DDX54-205ENST00000548786 PARNO95453 639 aaKnown RBP17.81■□□□□ 0.44
DDX54-205ENST00000548786 ATP2B1P20020 1258 aa17.81■□□□□ 0.44
DDX54-205ENST00000548786 DEFB103AP81534 67 aa17.81■□□□□ 0.44
DDX54-205ENST00000548786 TAF2Q6P1X5 1199 aa17.81■□□□□ 0.44
DDX54-205ENST00000548786 MIER3Q7Z3K6 550 aa17.81■□□□□ 0.44
DDX54-205ENST00000548786 FAM184AQ8NB25 1140 aa17.81■□□□□ 0.44
DDX54-205ENST00000548786 DBF4BQ8NFT6 615 aa17.81■□□□□ 0.44
DDX54-205ENST00000548786 MBOAT7Q96N66 472 aa17.81■□□□□ 0.44
DDX54-205ENST00000548786 GUCD1Q96NT3 240 aa17.81■□□□□ 0.44
DDX54-205ENST00000548786 LLPHQ9BRT6 129 aaKnown RBP17.81■□□□□ 0.44
DDX54-205ENST00000548786 MSRAQ9UJ68 235 aa17.81■□□□□ 0.44
DDX54-205ENST00000548786 IGSF9BQ9UPX0 1349 aa17.8■□□□□ 0.44
DDX54-205ENST00000548786 WNT7AO00755 349 aa17.8■□□□□ 0.44
DDX54-205ENST00000548786 MARCH6O60337 910 aa17.8■□□□□ 0.44
DDX54-205ENST00000548786 HBP1O60381 514 aa17.8■□□□□ 0.44
DDX54-205ENST00000548786 CHRNA1P02708 482 aa17.8■□□□□ 0.44
DDX54-205ENST00000548786 GHRP10912 638 aa17.8■□□□□ 0.44
DDX54-205ENST00000548786 SLC26A2P50443 739 aa17.8■□□□□ 0.44
DDX54-205ENST00000548786 JAK3P52333 1124 aa17.8■□□□□ 0.44
DDX54-205ENST00000548786 WDR5P61964 334 aaKnown RBP17.8■□□□□ 0.44
DDX54-205ENST00000548786 PRKCEQ02156 737 aa17.8■□□□□ 0.44
DDX54-205ENST00000548786 FAM117BQ6P1L5 589 aa17.8■□□□□ 0.44
DDX54-205ENST00000548786 MTHFD1LQ6UB35 978 aa17.8■□□□□ 0.44
DDX54-205ENST00000548786 MOXD1Q6UVY6 613 aa17.8■□□□□ 0.44
DDX54-205ENST00000548786 RSPH3Q86UC2 560 aa17.8■□□□□ 0.44
DDX54-205ENST00000548786 TNPO1Q92973 898 aaKnown RBP17.8■□□□□ 0.44
DDX54-205ENST00000548786 PPP1R16BQ96T49 567 aa17.8■□□□□ 0.44
DDX54-205ENST00000548786 MAFBQ9Y5Q3 323 aaPredicted RBP17.8■□□□□ 0.44
DDX54-205ENST00000548786 CDY2AQ9Y6F7 541 aa17.8■□□□□ 0.44
DDX54-205ENST00000548786 CDH23Q9H251 3354 aa17.8■□□□□ 0.44
DDX54-205ENST00000548786 SIP14410 1827 aa17.79■□□□□ 0.44
DDX54-205ENST00000548786 MYH9P35579 1960 aaKnown RBP17.79■□□□□ 0.44
DDX54-205ENST00000548786 ZBTB42B2RXF5 422 aa17.79■□□□□ 0.44
DDX54-205ENST00000548786 ZNF862O60290 1169 aa17.79■□□□□ 0.44
DDX54-205ENST00000548786 CAND2O75155 1236 aa17.79■□□□□ 0.44
DDX54-205ENST00000548786 BAIAP3O94812 1187 aa17.79■□□□□ 0.44
DDX54-205ENST00000548786 KLRC1P26715 233 aa17.79■□□□□ 0.44
DDX54-205ENST00000548786 SFNP31947 248 aa17.79■□□□□ 0.44
DDX54-205ENST00000548786 IKBKEQ14164 716 aa17.79■□□□□ 0.44
DDX54-205ENST00000548786 SAFBQ15424 915 aaKnown RBP eCLIP17.79■□□□□ 0.44
DDX54-205ENST00000548786 RAB30Q15771 203 aa17.79■□□□□ 0.44
DDX54-205ENST00000548786 PPP4R3AQ6IN85 833 aa17.79■□□□□ 0.44
DDX54-205ENST00000548786 BANK1Q8NDB2 785 aa17.79■□□□□ 0.44
DDX54-205ENST00000548786 SLC9A7Q96T83 725 aa17.79■□□□□ 0.44
DDX54-205ENST00000548786 CDX2Q99626 313 aaPredicted RBP17.79■□□□□ 0.44
DDX54-205ENST00000548786 ZNF576Q9H609 170 aa17.79■□□□□ 0.44
DDX54-205ENST00000548786 GINS2Q9Y248 185 aa17.79■□□□□ 0.44
DDX54-205ENST00000548786 PTPRSQ13332 1948 aa17.78■□□□□ 0.44
DDX54-205ENST00000548786 COL6A3P12111 3177 aa17.78■□□□□ 0.44
DDX54-205ENST00000548786 TMEM150BA6NC51 233 aa17.78■□□□□ 0.44
DDX54-205ENST00000548786 OATP04181 439 aa17.78■□□□□ 0.44
DDX54-205ENST00000548786 GCFC2P16383 781 aaKnown RBP17.78■□□□□ 0.44
DDX54-205ENST00000548786 MRPS6P82932 125 aaKnown RBP17.78■□□□□ 0.44
DDX54-205ENST00000548786 HMGN5P82970 282 aaKnown RBP17.78■□□□□ 0.44
DDX54-205ENST00000548786 MGAT3Q09327 533 aa17.78■□□□□ 0.44
DDX54-205ENST00000548786 GNL2Q13823 731 aaKnown RBP17.78■□□□□ 0.44
DDX54-205ENST00000548786 PLEKHG4Q58EX7 1191 aa17.78■□□□□ 0.44
DDX54-205ENST00000548786 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.78■□□□□ 0.44
DDX54-205ENST00000548786 HERC6Q8IVU3 1022 aa17.78■□□□□ 0.44
DDX54-205ENST00000548786 METTL13Q8N6R0 699 aa17.78■□□□□ 0.44
DDX54-205ENST00000548786 BBXQ8WY36 941 aaPredicted RBP17.78■□□□□ 0.44
DDX54-205ENST00000548786 MYLIPQ8WY64 445 aa17.78■□□□□ 0.44
DDX54-205ENST00000548786 SEPT8Q92599 483 aa17.78■□□□□ 0.44
DDX54-205ENST00000548786 TMX3Q96JJ7 454 aa17.78■□□□□ 0.44
DDX54-205ENST00000548786 KCNMB3Q9NPA1 279 aa17.78■□□□□ 0.44
DDX54-205ENST00000548786 PCDHA2Q9Y5H9 948 aa17.78■□□□□ 0.44
DDX54-205ENST00000548786 WDR81Q562E7 1941 aa17.77■□□□□ 0.44
DDX54-205ENST00000548786 ABHD14A-ACY1A0A1B0GW23 586 aa17.77■□□□□ 0.44
DDX54-205ENST00000548786 EML1O00423 815 aa17.77■□□□□ 0.44
DDX54-205ENST00000548786 CA3P07451 260 aa17.77■□□□□ 0.44
DDX54-205ENST00000548786 LPIN1Q14693 890 aa17.77■□□□□ 0.44
DDX54-205ENST00000548786 GRIN2CQ14957 1233 aa17.77■□□□□ 0.44
DDX54-205ENST00000548786 ZNF484Q5JVG2 852 aa17.77■□□□□ 0.44
DDX54-205ENST00000548786 FAM26DQ5JW98 314 aa17.77■□□□□ 0.44
DDX54-205ENST00000548786 PPP2R2DQ66LE6 453 aa17.77■□□□□ 0.44
DDX54-205ENST00000548786 NCAPH2Q6IBW4 605 aa17.77■□□□□ 0.44
DDX54-205ENST00000548786 MYOCDQ8IZQ8 938 aa17.77■□□□□ 0.44
DDX54-205ENST00000548786 HAS1Q92839 578 aa17.77■□□□□ 0.44
DDX54-205ENST00000548786 NAP1L4Q99733 375 aaKnown RBP17.77■□□□□ 0.44
DDX54-205ENST00000548786 SH2D3AQ9BRG2 576 aa17.77■□□□□ 0.44
DDX54-205ENST00000548786 ZBED2Q9BTP6 218 aa17.77■□□□□ 0.44
DDX54-205ENST00000548786 IFIH1Q9BYX4 1025 aaKnown RBP17.77■□□□□ 0.44
DDX54-205ENST00000548786 SLC28A3Q9HAS3 691 aa17.77■□□□□ 0.44
DDX54-205ENST00000548786 SEPT9Q9UHD8 586 aaPredicted RBP17.77■□□□□ 0.44
DDX54-205ENST00000548786 VAV3Q9UKW4 847 aa17.77■□□□□ 0.44
DDX54-205ENST00000548786 COL1A2P08123 1366 aa17.77■□□□□ 0.43
DDX54-205ENST00000548786 CHD7Q9P2D1 2997 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms