RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 FOXP1Q9H334 677 aaPredicted RBP10.04□□□□□ -0.8
SMARCC2-205ENST00000548130 KCNMB3Q9NPA1 279 aa10.04□□□□□ -0.8
SMARCC2-205ENST00000548130 ZNF302Q9NR11 478 aa10.04□□□□□ -0.8
SMARCC2-205ENST00000548130 ERAP1Q9NZ08 941 aa10.04□□□□□ -0.8
SMARCC2-205ENST00000548130 GABBR1Q9UBS5 961 aa10.04□□□□□ -0.8
SMARCC2-205ENST00000548130 SAMM50Q9Y512 469 aa10.04□□□□□ -0.8
SMARCC2-205ENST00000548130 PCDHA10Q9Y5I2 948 aa10.04□□□□□ -0.8
SMARCC2-205ENST00000548130 TRIOBPQ9H2D6 2365 aa10.04□□□□□ -0.8
SMARCC2-205ENST00000548130 DOCK5Q9H7D0 1870 aa10.04□□□□□ -0.8
SMARCC2-205ENST00000548130 IGKV6D-21A0A0A0MT36 114 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 H3BQV1 296 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 K7ELQ4 463 aaPredicted RBP10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 PSAPP07602 524 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 ACRP10323 421 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 INSRRP14616 1297 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 HOXC8P31273 242 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 MCM7P33993 719 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 IGBP1P78318 339 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 PPIGQ13427 754 aaKnown RBP eCLIP10.03□□□□□ -0.84e-6■■□□□ 11.8
SMARCC2-205ENST00000548130 NBR1Q14596 966 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 ZNF174Q15697 407 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 GRIK4Q16099 956 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 C9orf50Q5SZB4 431 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 FAM160B1Q5W0V3 765 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 LARP1BQ659C4 914 aaKnown RBP10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 MCTP1Q6DN14 999 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 PLPPR4Q7Z2D5 763 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 MIER3Q7Z3K6 550 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 SMAP1Q8IYB5 467 aaPredicted RBP10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 TMEM199Q8N511 208 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 RETREG2Q8NC44 543 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 LMBR1Q8WVP7 490 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 HAS1Q92839 578 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 ZBTB10Q96DT7 871 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 DISC1Q9NRI5 854 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 PCDHGA4Q9Y5G9 962 aa10.03□□□□□ -0.8
SMARCC2-205ENST00000548130 EML1O00423 815 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 GNAT1P11488 350 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 ATP4AP20648 1035 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 JAK3P52333 1124 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 PTK7Q13308 1070 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 BFSP2Q13515 415 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 SHHQ15465 462 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 CALCRLQ16602 461 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 UGCGQ16739 394 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 TRIM71Q2Q1W2 868 aaKnown RBP10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 B3GNT9Q6UX72 402 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 RUFY4Q6ZNE9 571 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 C16orf59Q7L2K0 433 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 DEFB128Q7Z7B8 93 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 SERINC5Q86VE9 423 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 NOSTRINQ8IVI9 506 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 SPNS2Q8IVW8 549 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 HSCBQ8IWL3 235 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 CKAP2LQ8IYA6 745 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 TDHQ8IZJ6 230 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 CAGE1Q8TC20 777 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 AFAP1L1Q8TED9 768 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 TRAPPC12Q8WVT3 735 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 SNX21Q969T3 373 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 FAM20AQ96MK3 541 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 KRTAP3-3Q9BYR6 98 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 KRTAP3-2Q9BYR7 98 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 TMEM60Q9H2L4 133 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 VAV3Q9UKW4 847 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 MAFBQ9Y5Q3 323 aaPredicted RBP10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 NRCAMQ92823 1304 aa10.02□□□□□ -0.81
SMARCC2-205ENST00000548130 TBX3O15119 743 aa10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 GTPBP6O43824 516 aaPredicted RBP10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 ZNF862O60290 1169 aa10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 HBP1O60381 514 aa10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 NEMFO60524 1076 aa10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 BAG4O95429 457 aaKnown RBP10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 IQCF3P0C7M6 154 aa10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 CKBP12277 381 aa10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 SELPP16109 830 aa10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 U2AF2P26368 475 aaKnown RBP eCLIP10.01□□□□□ -0.816e-9■■■■□ 23
SMARCC2-205ENST00000548130 SFNP31947 248 aa10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 THPOP40225 353 aa10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 ADAM17P78536 824 aa10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 TTC38Q5R3I4 469 aa10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 MARCH8Q5T0T0 291 aa10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 ZNF618Q5T7W0 954 aa10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 NCAPH2Q6IBW4 605 aa10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 LRRC8DQ7L1W4 858 aa10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 ZNF687Q8N1G0 1237 aa10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 CCDC155Q8N6L0 562 aa10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 ATP8B4Q8TF62 1192 aa10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.01□□□□□ -0.816e-7■□□□□ 11.2
SMARCC2-205ENST00000548130 IL23AQ9NPF7 189 aa10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 NOL7Q9UMY1 257 aaKnown RBP10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 IGSF9BQ9UPX0 1349 aa10.01□□□□□ -0.81
SMARCC2-205ENST00000548130 RRN3P2A6NIE6 340 aa10□□□□□ -0.81
SMARCC2-205ENST00000548130 CTSHP09668 335 aa10□□□□□ -0.81
SMARCC2-205ENST00000548130 TXKP42681 527 aa10□□□□□ -0.81
SMARCC2-205ENST00000548130 SLC26A2P50443 739 aa10□□□□□ -0.81
SMARCC2-205ENST00000548130 TOB1P50616 345 aaPredicted RBP10□□□□□ -0.81
SMARCC2-205ENST00000548130 PRKCEQ02156 737 aa10□□□□□ -0.81
SMARCC2-205ENST00000548130 RBL2Q08999 1139 aa10□□□□□ -0.81
SMARCC2-205ENST00000548130 PPP2R5CQ13362 524 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms