RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 URI1O94763 535 aaPredicted RBP12.99□□□□□ -0.33
RNF41-203ENST00000547967 APBA1Q02410 837 aa12.99□□□□□ -0.33
RNF41-203ENST00000547967 TTLL12Q14166 644 aaPredicted RBP12.99□□□□□ -0.33
RNF41-203ENST00000547967 ODR4Q5SWX8 454 aa12.99□□□□□ -0.33
RNF41-203ENST00000547967 NOL9Q5SY16 702 aaKnown RBP12.99□□□□□ -0.33
RNF41-203ENST00000547967 NIPA1Q7RTP0 329 aa12.99□□□□□ -0.33
RNF41-203ENST00000547967 CLMNQ96JQ2 1002 aa12.99□□□□□ -0.33
RNF41-203ENST00000547967 CEP63Q96MT8 703 aa12.99□□□□□ -0.33
RNF41-203ENST00000547967 ZSWIM4Q9H7M6 989 aa12.99□□□□□ -0.33
RNF41-203ENST00000547967 A1CFQ9NQ94 594 aaKnown RBP12.99□□□□□ -0.33
RNF41-203ENST00000547967 TFR2Q9UP52 801 aa12.99□□□□□ -0.33
RNF41-203ENST00000547967 EPN1Q9Y6I3 576 aaPredicted RBP12.99□□□□□ -0.33
RNF41-203ENST00000547967 COL11A1P12107 1806 aaPredicted RBP12.99□□□□□ -0.33
RNF41-203ENST00000547967 ZBED6P86452 979 aa12.98□□□□□ -0.33
RNF41-203ENST00000547967 UGCGQ16739 394 aa12.98□□□□□ -0.33
RNF41-203ENST00000547967 PADI6Q6TGC4 694 aa12.98□□□□□ -0.33
RNF41-203ENST00000547967 FAM178BQ8IXR5 827 aa12.98□□□□□ -0.33
RNF41-203ENST00000547967 RETREG2Q8NC44 543 aa12.98□□□□□ -0.33
RNF41-203ENST00000547967 ZNF397Q8NF99 534 aaPredicted RBP12.98□□□□□ -0.33
RNF41-203ENST00000547967 OTUD5Q96G74 571 aa12.98□□□□□ -0.33
RNF41-203ENST00000547967 TBC1D22BQ9NU19 505 aa12.98□□□□□ -0.33
RNF41-203ENST00000547967 ZNHIT6Q9NWK9 470 aaKnown RBP12.98□□□□□ -0.33
RNF41-203ENST00000547967 PNMA2Q9UL42 364 aa12.98□□□□□ -0.33
RNF41-203ENST00000547967 DICER1Q9UPY3 1922 aaKnown RBP12.98□□□□□ -0.33
RNF41-203ENST00000547967 IRF6O14896 467 aa12.98□□□□□ -0.33
RNF41-203ENST00000547967 NDUFA10O95299 355 aa12.98□□□□□ -0.33
RNF41-203ENST00000547967 CCNE2O96020 404 aa12.98□□□□□ -0.33
RNF41-203ENST00000547967 QARSP47897 775 aaKnown RBP12.98□□□□□ -0.33
RNF41-203ENST00000547967 EDRF1Q3B7T1 1238 aa12.98□□□□□ -0.33
RNF41-203ENST00000547967 ARHGAP29Q52LW3 1261 aa12.98□□□□□ -0.33
RNF41-203ENST00000547967 GADL1Q6ZQY3 521 aa12.98□□□□□ -0.33
RNF41-203ENST00000547967 VSIG10LQ86VR7 867 aa12.98□□□□□ -0.33
RNF41-203ENST00000547967 KCTD17Q8N5Z5 321 aa12.98□□□□□ -0.33
RNF41-203ENST00000547967 OLFML3Q9NRN5 406 aa12.98□□□□□ -0.33
RNF41-203ENST00000547967 CYP39A1Q9NYL5 469 aa12.98□□□□□ -0.33
RNF41-203ENST00000547967 FRMPD4Q14CM0 1322 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 CTIFO43310 598 aaKnown RBP12.97□□□□□ -0.33
RNF41-203ENST00000547967 HIP1RO75146 1068 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 PLEKP08567 350 aaPredicted RBP12.97□□□□□ -0.33
RNF41-203ENST00000547967 GAP43P17677 238 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 CCND2P30279 289 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 CASQ1P31415 396 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 CASP4P49662 377 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 OAZ1P54368 228 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 KCNMA1Q12791 1236 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 FOXR2Q6PJQ5 311 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 RRAGAQ7L523 313 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 TRIM59Q8IWR1 403 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 NSUN6Q8TEA1 469 aaKnown RBP12.97□□□□□ -0.33
RNF41-203ENST00000547967 ACAD9Q9H845 621 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 NLRC4Q9NPP4 1024 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 TRAF3IP3Q9Y228 551 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 PCDHB13Q9Y5F0 798 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 ASTN1O14525 1302 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 PDXKO00764 312 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 CALUO43852 315 aaPredicted RBP12.97□□□□□ -0.33
RNF41-203ENST00000547967 USO1O60763 962 aaKnown RBP12.97□□□□□ -0.33
RNF41-203ENST00000547967 AKAP3O75969 853 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 GNA14O95837 355 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 NR3C1P04150 777 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 TUBB4AP04350 444 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 PPP4R3CPQ6ZMV5 832 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 SAMD3Q8N6K7 520 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 LRRN4CLQ8ND94 238 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 RBM46Q8TBY0 533 aaKnown RBP12.97□□□□□ -0.33
RNF41-203ENST00000547967 CCDC43Q96MW1 224 aaKnown RBP12.97□□□□□ -0.33
RNF41-203ENST00000547967 NHEJ1Q9H9Q4 299 aaPredicted RBP12.97□□□□□ -0.33
RNF41-203ENST00000547967 TELO2Q9Y4R8 837 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 RLFQ13129 1914 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 PHIPQ8WWQ0 1821 aa12.97□□□□□ -0.33
RNF41-203ENST00000547967 PHLPP2Q6ZVD8 1323 aa12.96□□□□□ -0.33
RNF41-203ENST00000547967 MUTP22033 750 aa12.96□□□□□ -0.33
RNF41-203ENST00000547967 YWHABP31946 246 aaKnown RBP12.96□□□□□ -0.33
RNF41-203ENST00000547967 KCNH2Q12809 1159 aa12.96□□□□□ -0.33
RNF41-203ENST00000547967 DCAF17Q5H9S7 520 aaPredicted RBP12.96□□□□□ -0.33
RNF41-203ENST00000547967 TCERG1LQ5VWI1 586 aa12.96□□□□□ -0.33
RNF41-203ENST00000547967 DPY19L2Q6NUT2 758 aa12.96□□□□□ -0.33
RNF41-203ENST00000547967 ZNF720Q7Z2F6 126 aa12.96□□□□□ -0.33
RNF41-203ENST00000547967 CACNA2D4Q7Z3S7 1137 aa12.96□□□□□ -0.33
RNF41-203ENST00000547967 NLRX1Q86UT6 975 aa12.96□□□□□ -0.33
RNF41-203ENST00000547967 DAW1Q8N136 415 aa12.96□□□□□ -0.33
RNF41-203ENST00000547967 ZNF710Q8N1W2 664 aa12.96□□□□□ -0.33
RNF41-203ENST00000547967 NEK11Q8NG66 645 aa12.96□□□□□ -0.33
RNF41-203ENST00000547967 TYW1Q9NV66 732 aaKnown RBP12.96□□□□□ -0.33
RNF41-203ENST00000547967 TRIM10Q9UDY6 481 aa12.96□□□□□ -0.33
RNF41-203ENST00000547967 ARMCX3Q9UH62 379 aaPredicted RBP12.96□□□□□ -0.33
RNF41-203ENST00000547967 REXO2Q9Y3B8 237 aaKnown RBP12.96□□□□□ -0.33
RNF41-203ENST00000547967 PARP14Q460N5 1801 aa12.96□□□□□ -0.34
RNF41-203ENST00000547967 TGFB1I1O43294 461 aa12.96□□□□□ -0.34
RNF41-203ENST00000547967 RGS20O76081 388 aa12.96□□□□□ -0.34
RNF41-203ENST00000547967 RARRES1P49788 294 aa12.96□□□□□ -0.34
RNF41-203ENST00000547967 NPEPPSP55786 919 aa12.96□□□□□ -0.34
RNF41-203ENST00000547967 CNTN2Q02246 1040 aa12.96□□□□□ -0.34
RNF41-203ENST00000547967 CYP27A1Q02318 531 aa12.96□□□□□ -0.34
RNF41-203ENST00000547967 FSTL1Q12841 308 aa12.96□□□□□ -0.34
RNF41-203ENST00000547967 EAPPQ56P03 285 aaPredicted RBP12.96□□□□□ -0.34
RNF41-203ENST00000547967 ZNF569Q5MCW4 686 aa12.96□□□□□ -0.34
RNF41-203ENST00000547967 PLA2G4FQ68DD2 849 aa12.96□□□□□ -0.34
RNF41-203ENST00000547967 ANKRD35Q8N283 1001 aa12.96□□□□□ -0.34
RNF41-203ENST00000547967 NEK9Q8TD19 979 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms