RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 ABLIM1O14639 778 aa5.84□□□□□ -1.47
CBX5-203ENST00000547872 DLX3O60479 287 aa5.84□□□□□ -1.47
CBX5-203ENST00000547872 PABPC1P11940 636 aaKnown RBP5.84□□□□□ -1.47
CBX5-203ENST00000547872 RPL11P62913 178 aaKnown RBP5.84□□□□□ -1.47
CBX5-203ENST00000547872 INF2Q27J81 1249 aa5.84□□□□□ -1.47
CBX5-203ENST00000547872 SLC35F1Q5T1Q4 408 aa5.84□□□□□ -1.47
CBX5-203ENST00000547872 MBLAC2Q68D91 279 aa5.84□□□□□ -1.47
CBX5-203ENST00000547872 USP53Q70EK8 1073 aa5.84□□□□□ -1.47
CBX5-203ENST00000547872 KREMEN2Q8NCW0 462 aa5.84□□□□□ -1.47
CBX5-203ENST00000547872 C1orf159Q96HA4 380 aa5.84□□□□□ -1.47
CBX5-203ENST00000547872 MARCH2Q9P0N8 246 aa5.84□□□□□ -1.47
CBX5-203ENST00000547872 TMEFF2Q9UIK5 374 aaPredicted RBP5.84□□□□□ -1.47
CBX5-203ENST00000547872 DBR1Q9UK59 544 aaKnown RBP5.84□□□□□ -1.47
CBX5-203ENST00000547872 C4AP0C0L4 1744 aa5.84□□□□□ -1.47
CBX5-203ENST00000547872 MON2Q7Z3U7 1717 aa5.84□□□□□ -1.47
CBX5-203ENST00000547872 BRCA1P38398 1863 aaKnown RBP5.83□□□□□ -1.48
CBX5-203ENST00000547872 FUCA1P04066 466 aa5.83□□□□□ -1.48
CBX5-203ENST00000547872 CAPNS1P04632 268 aa5.83□□□□□ -1.48
CBX5-203ENST00000547872 CHRNA5P30532 468 aa5.83□□□□□ -1.48
CBX5-203ENST00000547872 GTF2A2P52657 109 aa5.83□□□□□ -1.48
CBX5-203ENST00000547872 NR1I3Q14994 352 aa5.83□□□□□ -1.48
CBX5-203ENST00000547872 CCDC144BQ3MJ40 725 aa5.83□□□□□ -1.48
CBX5-203ENST00000547872 ZNF648Q5T619 568 aaPredicted RBP5.83□□□□□ -1.48
CBX5-203ENST00000547872 YOD1Q5VVQ6 348 aaPredicted RBP5.83□□□□□ -1.48
CBX5-203ENST00000547872 CCDC103Q8IW40 242 aa5.83□□□□□ -1.48
CBX5-203ENST00000547872 POU5F2Q8N7G0 328 aa5.83□□□□□ -1.48
CBX5-203ENST00000547872 ZBTB38Q8NAP3 1195 aaPredicted RBP5.83□□□□□ -1.48
CBX5-203ENST00000547872 ZCRB1Q8TBF4 217 aaKnown RBP5.83□□□□□ -1.48
CBX5-203ENST00000547872 OSBP2Q969R2 916 aa5.83□□□□□ -1.48
CBX5-203ENST00000547872 CHAMP1Q96JM3 812 aa5.83□□□□□ -1.48
CBX5-203ENST00000547872 ZNF552Q9H707 407 aaPredicted RBP5.83□□□□□ -1.48
CBX5-203ENST00000547872 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.83□□□□□ -1.48
CBX5-203ENST00000547872 TIMM13Q9Y5L4 95 aaPredicted RBP5.83□□□□□ -1.48
CBX5-203ENST00000547872 KIF13BQ9NQT8 1826 aa5.83□□□□□ -1.48
CBX5-203ENST00000547872 ARFGEF1Q9Y6D6 1849 aa5.83□□□□□ -1.48
CBX5-203ENST00000547872 C10orf71Q711Q0 1435 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 HRKO00198 91 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 SRGAP3O43295 1099 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 ADCY3O60266 1144 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 PEX10O60683 326 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 CYBBP04839 570 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 DBHP09172 617 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 FBLN1P23142 703 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 CTCFP49711 727 aaPredicted RBP5.82□□□□□ -1.48
CBX5-203ENST00000547872 SRSF3P84103 164 aaKnown RBP5.82□□□□□ -1.48
CBX5-203ENST00000547872 TESK1Q15569 626 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 PKN1Q16512 942 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 DENND5AQ6IQ26 1287 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 PAQR3Q6TCH7 311 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 RPTNQ6XPR3 784 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 SYDE1Q6ZW31 735 aaPredicted RBP5.82□□□□□ -1.48
CBX5-203ENST00000547872 DPH6Q7L8W6 267 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 SCUBE1Q8IWY4 988 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 PPP1R16BQ96T49 567 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 KCNK12Q9HB15 430 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 SIRT5Q9NXA8 310 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 NUDT5Q9UKK9 219 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 PCDHA2Q9Y5H9 948 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 ITGB4P16144 1822 aa5.82□□□□□ -1.48
CBX5-203ENST00000547872 TTC21AQ8NDW8 1320 aa5.81□□□□□ -1.48
CBX5-203ENST00000547872 TRBV23-1A0A0A0MS06 115 aa5.81□□□□□ -1.48
CBX5-203ENST00000547872 FAM153BP0C7A2 387 aa5.81□□□□□ -1.48
CBX5-203ENST00000547872 LCP1P13796 627 aa5.81□□□□□ -1.48
CBX5-203ENST00000547872 BCL6P41182 706 aa5.81□□□□□ -1.48
CBX5-203ENST00000547872 SUMO1P63165 101 aaKnown RBP5.81□□□□□ -1.48
CBX5-203ENST00000547872 MESP2Q0VG99 397 aa5.81□□□□□ -1.48
CBX5-203ENST00000547872 LONRF2Q1L5Z9 754 aa5.81□□□□□ -1.48
CBX5-203ENST00000547872 ZC3H12BQ5HYM0 836 aaKnown RBP5.81□□□□□ -1.48
CBX5-203ENST00000547872 WWC2Q6AWC2 1192 aa5.81□□□□□ -1.48
CBX5-203ENST00000547872 ZC3H14Q6PJT7 736 aaKnown RBP5.81□□□□□ -1.48
CBX5-203ENST00000547872 TEX2Q8IWB9 1127 aa5.81□□□□□ -1.48
CBX5-203ENST00000547872 RCBTB1Q8NDN9 531 aa5.81□□□□□ -1.48
CBX5-203ENST00000547872 THAP3Q8WTV1 239 aaPredicted RBP5.81□□□□□ -1.48
CBX5-203ENST00000547872 DCAF4Q8WV16 495 aa5.81□□□□□ -1.48
CBX5-203ENST00000547872 DPF3Q92784 378 aa5.81□□□□□ -1.48
CBX5-203ENST00000547872 TRMT2BQ96GJ1 504 aaKnown RBP5.81□□□□□ -1.48
CBX5-203ENST00000547872 TMEM169Q96HH4 297 aa5.81□□□□□ -1.48
CBX5-203ENST00000547872 MTA3Q9BTC8 594 aa5.81□□□□□ -1.48
CBX5-203ENST00000547872 PHF20Q9BVI0 1012 aa5.81□□□□□ -1.48
CBX5-203ENST00000547872 MCOLN1Q9GZU1 580 aa5.81□□□□□ -1.48
CBX5-203ENST00000547872 GPR27Q9NS67 375 aa5.81□□□□□ -1.48
CBX5-203ENST00000547872 KLHL14Q9P2G3 628 aa5.81□□□□□ -1.48
CBX5-203ENST00000547872 NSD3Q9BZ95 1437 aa5.81□□□□□ -1.48
CBX5-203ENST00000547872 EVC2Q86UK5 1308 aa5.8□□□□□ -1.48
CBX5-203ENST00000547872 ZC3H12DA2A288 527 aaKnown RBP5.8□□□□□ -1.48
CBX5-203ENST00000547872 C22orf46C9J442 243 aa5.8□□□□□ -1.48
CBX5-203ENST00000547872 F8W031 263 aaPredicted RBP5.8□□□□□ -1.48
CBX5-203ENST00000547872 NFIBO00712 420 aa5.8□□□□□ -1.48
CBX5-203ENST00000547872 PPP1R11O60927 126 aaPredicted RBP5.8□□□□□ -1.48
CBX5-203ENST00000547872 SEMA7AO75326 666 aa5.8□□□□□ -1.48
CBX5-203ENST00000547872 TMEM253P0C7T8 217 aa5.8□□□□□ -1.48
CBX5-203ENST00000547872 GLI4P10075 376 aa5.8□□□□□ -1.48
CBX5-203ENST00000547872 FPR2P25090 351 aa5.8□□□□□ -1.48
CBX5-203ENST00000547872 VIPR1P32241 457 aa5.8□□□□□ -1.48
CBX5-203ENST00000547872 MAPKAPK2P49137 400 aa5.8□□□□□ -1.48
CBX5-203ENST00000547872 AMPHP49418 695 aa5.8□□□□□ -1.48
CBX5-203ENST00000547872 TGFB2P61812 414 aa5.8□□□□□ -1.48
CBX5-203ENST00000547872 YBX1P67809 324 aaKnown RBP5.8□□□□□ -1.48
CBX5-203ENST00000547872 LSAMPQ13449 338 aa5.8□□□□□ -1.48
CBX5-203ENST00000547872 PLEKHN1Q494U1 663 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms