RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 IGSF9BQ9UPX0 1349 aa21.11■□□□□ 0.97
PRPF40B-206ENST00000547764 MYH9P35579 1960 aaKnown RBP21.11■□□□□ 0.97
PRPF40B-206ENST00000547764 RSPH10B2B2RC85 870 aa21.11■□□□□ 0.97
PRPF40B-206ENST00000547764 MARCH6O60337 910 aa21.11■□□□□ 0.97
PRPF40B-206ENST00000547764 CAND2O75155 1236 aa21.11■□□□□ 0.97
PRPF40B-206ENST00000547764 RSPH10BP0C881 870 aa21.11■□□□□ 0.97
PRPF40B-206ENST00000547764 ATP2B1P20020 1258 aa21.11■□□□□ 0.97
PRPF40B-206ENST00000547764 MBTPS1Q14703 1052 aa21.11■□□□□ 0.97
PRPF40B-206ENST00000547764 UGCGQ16739 394 aa21.11■□□□□ 0.97
PRPF40B-206ENST00000547764 TRMT1LQ7Z2T5 733 aaKnown RBP21.11■□□□□ 0.97
PRPF40B-206ENST00000547764 BBXQ8WY36 941 aaPredicted RBP21.11■□□□□ 0.97
PRPF40B-206ENST00000547764 SMC3Q9UQE7 1217 aa21.11■□□□□ 0.97
PRPF40B-206ENST00000547764 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.11■□□□□ 0.97
PRPF40B-206ENST00000547764 TET1Q8NFU7 2136 aa21.11■□□□□ 0.97
PRPF40B-206ENST00000547764 KIF28PB7ZC32 967 aa21.1■□□□□ 0.97
PRPF40B-206ENST00000547764 RBAK-RBAKDNI3L0D1 243 aa21.1■□□□□ 0.97
PRPF40B-206ENST00000547764 EML1O00423 815 aa21.1■□□□□ 0.97
PRPF40B-206ENST00000547764 ZNF862O60290 1169 aa21.1■□□□□ 0.97
PRPF40B-206ENST00000547764 BAG4O95429 457 aaKnown RBP21.1■□□□□ 0.97
PRPF40B-206ENST00000547764 CXCL10P02778 98 aa21.1■□□□□ 0.97
PRPF40B-206ENST00000547764 CTSHP09668 335 aa21.1■□□□□ 0.97
PRPF40B-206ENST00000547764 PPP2R5CQ13362 524 aa21.1■□□□□ 0.97
PRPF40B-206ENST00000547764 GNL2Q13823 731 aaKnown RBP21.1■□□□□ 0.97
PRPF40B-206ENST00000547764 RPAINQ86UA6 219 aa21.1■□□□□ 0.97
PRPF40B-206ENST00000547764 NOSTRINQ8IVI9 506 aa21.1■□□□□ 0.97
PRPF40B-206ENST00000547764 SLFN12Q8IYM2 578 aa21.1■□□□□ 0.97
PRPF40B-206ENST00000547764 MTIF3Q9H2K0 278 aaKnown RBP21.1■□□□□ 0.97
PRPF40B-206ENST00000547764 SZT2Q5T011 3432 aa21.1■□□□□ 0.97
PRPF40B-206ENST00000547764 ZBTB42B2RXF5 422 aa21.09■□□□□ 0.97
PRPF40B-206ENST00000547764 NEMFO60524 1076 aa21.09■□□□□ 0.97
PRPF40B-206ENST00000547764 U2AF2P26368 475 aaKnown RBP eCLIP21.09■□□□□ 0.97
PRPF40B-206ENST00000547764 KLRC1P26715 233 aa21.09■□□□□ 0.97
PRPF40B-206ENST00000547764 CUL4AQ13619 759 aa21.09■□□□□ 0.97
PRPF40B-206ENST00000547764 CALCRLQ16602 461 aa21.09■□□□□ 0.97
PRPF40B-206ENST00000547764 ZNF484Q5JVG2 852 aa21.09■□□□□ 0.97
PRPF40B-206ENST00000547764 MTHFD1LQ6UB35 978 aa21.09■□□□□ 0.97
PRPF40B-206ENST00000547764 DNAJB3Q8WWF6 145 aa21.09■□□□□ 0.97
PRPF40B-206ENST00000547764 FAM167AQ96KS9 214 aa21.09■□□□□ 0.97
PRPF40B-206ENST00000547764 PCDHA2Q9Y5H9 948 aa21.09■□□□□ 0.97
PRPF40B-206ENST00000547764 WDR81Q562E7 1941 aa21.09■□□□□ 0.97
PRPF40B-206ENST00000547764 COL1A2P08123 1366 aa21.09■□□□□ 0.97
PRPF40B-206ENST00000547764 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.08■□□□□ 0.97
PRPF40B-206ENST00000547764 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.08■□□□□ 0.97
PRPF40B-206ENST00000547764 ZBBXA8MT70 800 aa21.08■□□□□ 0.97
PRPF40B-206ENST00000547764 ACTN1P12814 892 aa21.08■□□□□ 0.97
PRPF40B-206ENST00000547764 SMAD3P84022 425 aaKnown RBP21.08■□□□□ 0.97
PRPF40B-206ENST00000547764 PRKCEQ02156 737 aa21.08■□□□□ 0.97
PRPF40B-206ENST00000547764 FAM26DQ5JW98 314 aa21.08■□□□□ 0.97
PRPF40B-206ENST00000547764 FAM109BQ6ICB4 259 aaPredicted RBP21.08■□□□□ 0.97
PRPF40B-206ENST00000547764 RSPH3Q86UC2 560 aa21.08■□□□□ 0.97
PRPF40B-206ENST00000547764 FAM49AQ9H0Q0 323 aaPredicted RBP21.08■□□□□ 0.97
PRPF40B-206ENST00000547764 CHRNA1P02708 482 aa21.07■□□□□ 0.96
PRPF40B-206ENST00000547764 OATP04181 439 aa21.07■□□□□ 0.96
PRPF40B-206ENST00000547764 MCM7P33993 719 aa21.07■□□□□ 0.96
PRPF40B-206ENST00000547764 SPIRE1Q08AE8 756 aa21.07■□□□□ 0.96
PRPF40B-206ENST00000547764 GPR153Q6NV75 609 aa21.07■□□□□ 0.96
PRPF40B-206ENST00000547764 MTMR9Q96QG7 549 aa21.07■□□□□ 0.96
PRPF40B-206ENST00000547764 OSBPL7Q9BZF2 842 aa21.07■□□□□ 0.96
PRPF40B-206ENST00000547764 TMEM60Q9H2L4 133 aa21.07■□□□□ 0.96
PRPF40B-206ENST00000547764 NRBP2Q9NSY0 501 aa21.07■□□□□ 0.96
PRPF40B-206ENST00000547764 SLC4A7Q9Y6M7 1214 aa21.07■□□□□ 0.96
PRPF40B-206ENST00000547764 SMIM35A0A1B0GVV1 85 aa21.06■□□□□ 0.96
PRPF40B-206ENST00000547764 GRXCR1A8MXD5 290 aa21.06■□□□□ 0.96
PRPF40B-206ENST00000547764 ZNF174Q15697 407 aa21.06■□□□□ 0.96
PRPF40B-206ENST00000547764 TCTN1Q2MV58 587 aa21.06■□□□□ 0.96
PRPF40B-206ENST00000547764 CNKSR3Q6P9H4 555 aa21.06■□□□□ 0.96
PRPF40B-206ENST00000547764 BANK1Q8NDB2 785 aa21.06■□□□□ 0.96
PRPF40B-206ENST00000547764 PCDHA12Q9UN75 941 aa21.06■□□□□ 0.96
PRPF40B-206ENST00000547764 CEP131Q9UPN4 1083 aa21.06■□□□□ 0.96
PRPF40B-206ENST00000547764 H3BQV1 296 aa21.05■□□□□ 0.96
PRPF40B-206ENST00000547764 STBD1O95210 358 aa21.05■□□□□ 0.96
PRPF40B-206ENST00000547764 C22orf31O95567 290 aa21.05■□□□□ 0.96
PRPF40B-206ENST00000547764 RPLP2P05387 115 aaKnown RBP21.05■□□□□ 0.96
PRPF40B-206ENST00000547764 TXKP42681 527 aa21.05■□□□□ 0.96
PRPF40B-206ENST00000547764 TRAPPC10P48553 1259 aa21.05■□□□□ 0.96
PRPF40B-206ENST00000547764 PSMC5P62195 406 aa21.05■□□□□ 0.96
PRPF40B-206ENST00000547764 MGAT3Q09327 533 aa21.05■□□□□ 0.96
PRPF40B-206ENST00000547764 EPHA7Q15375 998 aa21.05■□□□□ 0.96
PRPF40B-206ENST00000547764 TTC38Q5R3I4 469 aa21.05■□□□□ 0.96
PRPF40B-206ENST00000547764 MCTP1Q6DN14 999 aa21.05■□□□□ 0.96
PRPF40B-206ENST00000547764 NCAPH2Q6IBW4 605 aa21.05■□□□□ 0.96
PRPF40B-206ENST00000547764 TTC12Q9H892 705 aaPredicted RBP21.05■□□□□ 0.96
PRPF40B-206ENST00000547764 NOL7Q9UMY1 257 aaKnown RBP21.05■□□□□ 0.96
PRPF40B-206ENST00000547764 BAIAP3O94812 1187 aa21.04■□□□□ 0.96
PRPF40B-206ENST00000547764 QARSP47897 775 aaKnown RBP21.04■□□□□ 0.96
PRPF40B-206ENST00000547764 MRPS6P82932 125 aaKnown RBP21.04■□□□□ 0.96
PRPF40B-206ENST00000547764 TMEM62Q0P6H9 643 aa21.04■□□□□ 0.96
PRPF40B-206ENST00000547764 ORC2Q13416 577 aaPredicted RBP21.04■□□□□ 0.96
PRPF40B-206ENST00000547764 PLEKHG4Q58EX7 1191 aa21.04■□□□□ 0.96
PRPF40B-206ENST00000547764 XKR3Q5GH77 459 aa21.04■□□□□ 0.96
PRPF40B-206ENST00000547764 LARP1BQ659C4 914 aaKnown RBP21.04■□□□□ 0.96
PRPF40B-206ENST00000547764 KIAA0319LQ8IZA0 1049 aa21.04■□□□□ 0.96
PRPF40B-206ENST00000547764 NME8Q8N427 588 aa21.04■□□□□ 0.96
PRPF40B-206ENST00000547764 DBF4BQ8NFT6 615 aa21.04■□□□□ 0.96
PRPF40B-206ENST00000547764 CDY2AQ9Y6F7 541 aa21.04■□□□□ 0.96
PRPF40B-206ENST00000547764 K7ELQ4 463 aaPredicted RBP21.03■□□□□ 0.96
PRPF40B-206ENST00000547764 P4HBP07237 508 aaKnown RBP21.03■□□□□ 0.96
PRPF40B-206ENST00000547764 TOB1P50616 345 aaPredicted RBP21.03■□□□□ 0.96
PRPF40B-206ENST00000547764 IKBKEQ14164 716 aa21.03■□□□□ 0.96
PRPF40B-206ENST00000547764 NBR1Q14596 966 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms