RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 SMIM10L2BP0DMW5 78 aa25.97■■□□□ 1.75
SMARCD1-203ENST00000547247 RPA1P27694 616 aa25.97■■□□□ 1.75
SMARCD1-203ENST00000547247 CDC25AP30304 524 aa25.97■■□□□ 1.75
SMARCD1-203ENST00000547247 CDK7P50613 346 aa25.97■■□□□ 1.75
SMARCD1-203ENST00000547247 SNX17Q15036 470 aa25.97■■□□□ 1.75
SMARCD1-203ENST00000547247 TRMT1LQ7Z2T5 733 aaKnown RBP25.97■■□□□ 1.75
SMARCD1-203ENST00000547247 SESTD1Q86VW0 696 aa25.97■■□□□ 1.75
SMARCD1-203ENST00000547247 CATSPER3Q86XQ3 398 aa25.97■■□□□ 1.75
SMARCD1-203ENST00000547247 C4orf19Q8IY42 314 aa25.97■■□□□ 1.75
SMARCD1-203ENST00000547247 SNX29Q8TEQ0 813 aa25.97■■□□□ 1.75
SMARCD1-203ENST00000547247 BBXQ8WY36 941 aaPredicted RBP25.97■■□□□ 1.75
SMARCD1-203ENST00000547247 NRBP2Q9NSY0 501 aa25.97■■□□□ 1.75
SMARCD1-203ENST00000547247 DNAH12Q6ZR08 3092 aa25.97■■□□□ 1.75
SMARCD1-203ENST00000547247 HBP1O60381 514 aa25.96■■□□□ 1.75
SMARCD1-203ENST00000547247 OATP04181 439 aa25.96■■□□□ 1.75
SMARCD1-203ENST00000547247 SPATA31C1P0DKV0 1188 aa25.96■■□□□ 1.75
SMARCD1-203ENST00000547247 CCT6AP40227 531 aaKnown RBP25.96■■□□□ 1.75
SMARCD1-203ENST00000547247 XKR3Q5GH77 459 aa25.96■■□□□ 1.75
SMARCD1-203ENST00000547247 LEO1Q8WVC0 666 aaPredicted RBP25.96■■□□□ 1.75
SMARCD1-203ENST00000547247 CLIC6Q96NY7 704 aa25.96■■□□□ 1.75
SMARCD1-203ENST00000547247 CSRNP2Q9H175 543 aa25.96■■□□□ 1.75
SMARCD1-203ENST00000547247 WRAP73Q9P2S5 460 aaPredicted RBP25.96■■□□□ 1.75
SMARCD1-203ENST00000547247 GTF2IRD1Q9UHL9 959 aa25.96■■□□□ 1.75
SMARCD1-203ENST00000547247 ALPK3Q96L96 1907 aa25.96■■□□□ 1.75
SMARCD1-203ENST00000547247 MROH7Q68CQ1 1323 aa25.96■■□□□ 1.75
SMARCD1-203ENST00000547247 MED24O75448 989 aa25.95■■□□□ 1.75
SMARCD1-203ENST00000547247 PPFIA1Q13136 1202 aa25.95■■□□□ 1.75
SMARCD1-203ENST00000547247 LRRC26Q2I0M4 334 aa25.95■■□□□ 1.75
SMARCD1-203ENST00000547247 NRCAMQ92823 1304 aa25.95■■□□□ 1.74
SMARCD1-203ENST00000547247 TCHHQ07283 1943 aa25.95■■□□□ 1.74
SMARCD1-203ENST00000547247 INSRRP14616 1297 aa25.95■■□□□ 1.74
SMARCD1-203ENST00000547247 MUTP22033 750 aa25.95■■□□□ 1.74
SMARCD1-203ENST00000547247 UBA7P41226 1012 aa25.95■■□□□ 1.74
SMARCD1-203ENST00000547247 ME1P48163 572 aa25.95■■□□□ 1.74
SMARCD1-203ENST00000547247 HTATIP2Q9BUP3 242 aa25.95■■□□□ 1.74
SMARCD1-203ENST00000547247 LYPLA2O95372 231 aa25.94■■□□□ 1.74
SMARCD1-203ENST00000547247 GNAT1P11488 350 aa25.94■■□□□ 1.74
SMARCD1-203ENST00000547247 RTP1P59025 263 aa25.94■■□□□ 1.74
SMARCD1-203ENST00000547247 MMTAG2Q9BU76 263 aaKnown RBP25.94■■□□□ 1.74
SMARCD1-203ENST00000547247 SETD4Q9NVD3 440 aa25.94■■□□□ 1.74
SMARCD1-203ENST00000547247 C17orf102A2RUQ5 167 aa25.93■■□□□ 1.74
SMARCD1-203ENST00000547247 RRN3P2A6NIE6 340 aa25.93■■□□□ 1.74
SMARCD1-203ENST00000547247 DDX11L8A8MPP1 907 aa25.93■■□□□ 1.74
SMARCD1-203ENST00000547247 CUTAO60888 179 aa25.93■■□□□ 1.74
SMARCD1-203ENST00000547247 STBD1O95210 358 aa25.93■■□□□ 1.74
SMARCD1-203ENST00000547247 GRIK4Q16099 956 aa25.93■■□□□ 1.74
SMARCD1-203ENST00000547247 TRIM60Q495X7 471 aa25.93■■□□□ 1.74
SMARCD1-203ENST00000547247 SPECC1Q5M775 1068 aa25.93■■□□□ 1.74
SMARCD1-203ENST00000547247 ANKRD33Q7Z3H0 272 aa25.93■■□□□ 1.74
SMARCD1-203ENST00000547247 CABP7Q86V35 215 aa25.93■■□□□ 1.74
SMARCD1-203ENST00000547247 SEPT9Q9UHD8 586 aaPredicted RBP25.93■■□□□ 1.74
SMARCD1-203ENST00000547247 PCDHA7Q9UN72 937 aa25.93■■□□□ 1.74
SMARCD1-203ENST00000547247 ATP11BQ9Y2G3 1177 aa25.93■■□□□ 1.74
SMARCD1-203ENST00000547247 HOXC8P31273 242 aa25.92■■□□□ 1.74
SMARCD1-203ENST00000547247 YWHABP31946 246 aaKnown RBP25.92■■□□□ 1.74
SMARCD1-203ENST00000547247 ZNF484Q5JVG2 852 aa25.92■■□□□ 1.74
SMARCD1-203ENST00000547247 GDF6Q6KF10 455 aaPredicted RBP25.92■■□□□ 1.74
SMARCD1-203ENST00000547247 OTUD6AQ7L8S5 288 aa25.92■■□□□ 1.74
SMARCD1-203ENST00000547247 ZNF579Q8NAF0 562 aaKnown RBP25.92■■□□□ 1.74
SMARCD1-203ENST00000547247 TOX2Q96NM4 488 aa25.92■■□□□ 1.74
SMARCD1-203ENST00000547247 KDM3AQ9Y4C1 1321 aa25.92■■□□□ 1.74
SMARCD1-203ENST00000547247 DCDC2CA8MYV0 355 aa25.91■■□□□ 1.74
SMARCD1-203ENST00000547247 SLC26A4O43511 780 aa25.91■■□□□ 1.74
SMARCD1-203ENST00000547247 PQBP1O60828 265 aaKnown RBP25.91■■□□□ 1.74
SMARCD1-203ENST00000547247 IGBP1P78318 339 aa25.91■■□□□ 1.74
SMARCD1-203ENST00000547247 TLE2Q04725 743 aa25.91■■□□□ 1.74
SMARCD1-203ENST00000547247 ANO5Q75V66 913 aa25.91■■□□□ 1.74
SMARCD1-203ENST00000547247 FAM126BQ8IXS8 530 aa25.91■■□□□ 1.74
SMARCD1-203ENST00000547247 LMBR1Q8WVP7 490 aa25.91■■□□□ 1.74
SMARCD1-203ENST00000547247 EPSTI1Q96J88 318 aa25.91■■□□□ 1.74
SMARCD1-203ENST00000547247 CDK5RAP3Q96JB5 506 aa25.91■■□□□ 1.74
SMARCD1-203ENST00000547247 NACC1Q96RE7 527 aa25.91■■□□□ 1.74
SMARCD1-203ENST00000547247 NIFKQ9BYG3 293 aaKnown RBP25.91■■□□□ 1.74
SMARCD1-203ENST00000547247 GDPD2Q9HCC8 539 aa25.91■■□□□ 1.74
SMARCD1-203ENST00000547247 COL1A2P08123 1366 aa25.91■■□□□ 1.74
SMARCD1-203ENST00000547247 KAT6AQ92794 2004 aa25.91■■□□□ 1.74
SMARCD1-203ENST00000547247 TLR3O15455 904 aaKnown RBP25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 B4GALT4O60513 344 aa25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 ZRSR1Q15695 479 aaKnown RBP25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 ECM1Q16610 540 aa25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 PTGISQ16647 500 aa25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 AXDND1Q5T1B0 1012 aaPredicted RBP25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 POTEGQ6S5H5 508 aa25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 DPF3Q92784 378 aa25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 SYMPKQ92797 1274 aaKnown RBP25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 CALML4Q96GE6 196 aa25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 CCSER1Q9C0I3 900 aa25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 NT5C3AQ9H0P0 336 aa25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 TRMT13Q9NUP7 481 aaKnown RBP25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 KIAA1024Q9UPX6 916 aa25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 ZBTB39O15060 712 aa25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 XRCC6P12956 609 aaKnown RBP eCLIP25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 TXLNAP40222 546 aa25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 ADAM17P78536 824 aa25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 HIC1Q14526 733 aa25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 HYIQ5T013 277 aa25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 USP49Q70CQ1 688 aa25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 PIGOQ8TEQ8 1089 aa25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 TRAPPC12Q8WVT3 735 aa25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 TRPV6Q9H1D0 765 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms