RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 PCSK9Q8NBP7 692 aaKnown RBP17.88■□□□□ 0.45
PRPF40A-212ENST00000545856 AFG1LQ8WV93 481 aa17.88■□□□□ 0.45
PRPF40A-212ENST00000545856 BBXQ8WY36 941 aaPredicted RBP17.88■□□□□ 0.45
PRPF40A-212ENST00000545856 DHX58Q96C10 678 aa17.88■□□□□ 0.45
PRPF40A-212ENST00000545856 SEZ6LQ9BYH1 1024 aa17.88■□□□□ 0.45
PRPF40A-212ENST00000545856 NRBP2Q9NSY0 501 aa17.88■□□□□ 0.45
PRPF40A-212ENST00000545856 RGL1Q9NZL6 768 aa17.88■□□□□ 0.45
PRPF40A-212ENST00000545856 COL1A2P08123 1366 aa17.88■□□□□ 0.45
PRPF40A-212ENST00000545856 MYH11P35749 1972 aa17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 A0A087X0B3 334 aa17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 POTEFA5A3E0 1075 aa17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 DYNC1LI2O43237 492 aaPredicted RBP17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 OATP04181 439 aa17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 LGALS2P05162 132 aa17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 CNGA1P29973 690 aa17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 YWHABP31946 246 aaKnown RBP17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 LBX1P52954 281 aa17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 FSCN1Q16658 493 aaKnown RBP17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 LONRF3Q496Y0 759 aa17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 SWSAP1Q6NVH7 229 aa17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 POTEGQ6S5H5 508 aa17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 SH3RF1Q7Z6J0 888 aa17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 SYT2Q8N9I0 419 aaPredicted RBP17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 GLG1Q92896 1179 aa17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 COPS5Q92905 334 aa17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 CCDC43Q96MW1 224 aaKnown RBP17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 JPH2Q9BR39 696 aaPredicted RBP17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 NIFKQ9BYG3 293 aaKnown RBP17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 XPNPEP3Q9NQH7 507 aa17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 BLOC1S4Q9NUP1 217 aa17.87■□□□□ 0.45
PRPF40A-212ENST00000545856 SYNRGQ9UMZ2 1314 aa17.86■□□□□ 0.45
PRPF40A-212ENST00000545856 HTTP42858 3142 aa17.86■□□□□ 0.45
PRPF40A-212ENST00000545856 ADCY6O43306 1168 aa17.86■□□□□ 0.45
PRPF40A-212ENST00000545856 GAS2O43903 313 aaKnown RBP17.86■□□□□ 0.45
PRPF40A-212ENST00000545856 ADAMTS4O75173 837 aa17.86■□□□□ 0.45
PRPF40A-212ENST00000545856 CABYRO75952 493 aa17.86■□□□□ 0.45
PRPF40A-212ENST00000545856 F2P00734 622 aa17.86■□□□□ 0.45
PRPF40A-212ENST00000545856 PRKCEQ02156 737 aa17.86■□□□□ 0.45
PRPF40A-212ENST00000545856 SP4Q02446 784 aa17.86■□□□□ 0.45
PRPF40A-212ENST00000545856 CTTNQ14247 550 aaKnown RBP17.86■□□□□ 0.45
PRPF40A-212ENST00000545856 RBM43Q6ZSC3 357 aaKnown RBP17.86■□□□□ 0.45
PRPF40A-212ENST00000545856 RNF180Q86T96 592 aa17.86■□□□□ 0.45
PRPF40A-212ENST00000545856 BANK1Q8NDB2 785 aa17.86■□□□□ 0.45
PRPF40A-212ENST00000545856 ATP8B4Q8TF62 1192 aa17.86■□□□□ 0.45
PRPF40A-212ENST00000545856 ARMC5Q96C12 935 aa17.86■□□□□ 0.45
PRPF40A-212ENST00000545856 UIMC1Q96RL1 719 aa17.86■□□□□ 0.45
PRPF40A-212ENST00000545856 TSEN34Q9BSV6 310 aaKnown RBP17.86■□□□□ 0.45
PRPF40A-212ENST00000545856 GTPBP6O43824 516 aaPredicted RBP17.85■□□□□ 0.45
PRPF40A-212ENST00000545856 HBP1O60381 514 aa17.85■□□□□ 0.45
PRPF40A-212ENST00000545856 SMC2O95347 1197 aa17.85■□□□□ 0.45
PRPF40A-212ENST00000545856 PLA2G4BP0C869 781 aa17.85■□□□□ 0.45
PRPF40A-212ENST00000545856 ZRSR1Q15695 479 aaKnown RBP17.85■□□□□ 0.45
PRPF40A-212ENST00000545856 ECM1Q16610 540 aa17.85■□□□□ 0.45
PRPF40A-212ENST00000545856 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.85■□□□□ 0.45
PRPF40A-212ENST00000545856 BCAS3Q9H6U6 928 aa17.85■□□□□ 0.45
PRPF40A-212ENST00000545856 PAK6Q9NQU5 681 aaPredicted RBP17.85■□□□□ 0.45
PRPF40A-212ENST00000545856 SERTAD1Q9UHV2 236 aa17.85■□□□□ 0.45
PRPF40A-212ENST00000545856 KCNG1Q9UIX4 513 aa17.85■□□□□ 0.45
PRPF40A-212ENST00000545856 ARHGEF35A5YM69 484 aa17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 MOXD2PA6NHM9 499 aa17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 ZNF862O60290 1169 aa17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 DGAT1O75907 488 aa17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 C6orf222P0C671 652 aaPredicted RBP17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 SCP2P22307 547 aa17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 CCND3P30281 292 aaPredicted RBP17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 RFC5P40937 340 aa17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 RARRES1P49788 294 aa17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 SLC12A3P55017 1021 aa17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 TRIM32Q13049 653 aa17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 POSTNQ15063 836 aa17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 ARRDC4Q8NCT1 418 aa17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 KLHDC9Q8NEP7 349 aa17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 CCDC47Q96A33 483 aaKnown RBP17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 PAGE5Q96GU1 130 aa17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 GSDMAQ96QA5 445 aa17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 PCYT2Q99447 389 aa17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 C7orf25Q9BPX7 421 aa17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 C16orf70Q9BSU1 422 aa17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 BHMT2Q9H2M3 363 aa17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 RMND1Q9NWS8 449 aa17.84■□□□□ 0.45
PRPF40A-212ENST00000545856 PVALEFA0A1B0GWK0 134 aa17.83■□□□□ 0.45
PRPF40A-212ENST00000545856 H3BRB1 525 aa17.83■□□□□ 0.45
PRPF40A-212ENST00000545856 RPLP2P05387 115 aaKnown RBP17.83■□□□□ 0.45
PRPF40A-212ENST00000545856 GUCY2CP25092 1073 aa17.83■□□□□ 0.45
PRPF40A-212ENST00000545856 UGCGQ16739 394 aa17.83■□□□□ 0.45
PRPF40A-212ENST00000545856 ZNF484Q5JVG2 852 aa17.83■□□□□ 0.45
PRPF40A-212ENST00000545856 GJC2Q5T442 439 aaPredicted RBP17.83■□□□□ 0.45
PRPF40A-212ENST00000545856 NT5DC1Q5TFE4 455 aa17.83■□□□□ 0.45
PRPF40A-212ENST00000545856 TRIML1Q8N9V2 468 aa17.83■□□□□ 0.45
PRPF40A-212ENST00000545856 MCPH1Q8NEM0 835 aa17.83■□□□□ 0.45
PRPF40A-212ENST00000545856 SPATA20Q8TB22 786 aa17.83■□□□□ 0.45
PRPF40A-212ENST00000545856 PANK2Q9BZ23 570 aa17.83■□□□□ 0.45
PRPF40A-212ENST00000545856 TRIM9Q9C026 710 aa17.83■□□□□ 0.45
PRPF40A-212ENST00000545856 TUT1Q9H6E5 874 aaKnown RBP17.83■□□□□ 0.45
PRPF40A-212ENST00000545856 WRAP73Q9P2S5 460 aaPredicted RBP17.83■□□□□ 0.45
PRPF40A-212ENST00000545856 ODF2LQ9ULJ1 636 aa17.83■□□□□ 0.45
PRPF40A-212ENST00000545856 E9PMD0 336 aa17.82■□□□□ 0.44
PRPF40A-212ENST00000545856 STBD1O95210 358 aa17.82■□□□□ 0.44
PRPF40A-212ENST00000545856 MDM2Q00987 491 aaPredicted RBP17.82■□□□□ 0.44
PRPF40A-212ENST00000545856 TMEM63BQ5T3F8 832 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms