RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 SWSAP1Q6NVH7 229 aa14.88□□□□□ -0.03
TNFRSF1A-215ENST00000543359 POTEBQ6S5H4 581 aa14.88□□□□□ -0.03
TNFRSF1A-215ENST00000543359 SP7Q8TDD2 431 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF1A-215ENST00000543359 ATP8B4Q8TF62 1192 aa14.88□□□□□ -0.03
TNFRSF1A-215ENST00000543359 SLC5A5Q92911 643 aa14.88□□□□□ -0.03
TNFRSF1A-215ENST00000543359 TOP1MTQ969P6 601 aa14.88□□□□□ -0.03
TNFRSF1A-215ENST00000543359 MBOAT7Q96N66 472 aa14.88□□□□□ -0.03
TNFRSF1A-215ENST00000543359 TRPC6Q9Y210 931 aa14.88□□□□□ -0.03
TNFRSF1A-215ENST00000543359 MAFBQ9Y5Q3 323 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF1A-215ENST00000543359 MTCH2Q9Y6C9 303 aa14.88□□□□□ -0.03
TNFRSF1A-215ENST00000543359 BRWD1Q9NSI6 2320 aa14.88□□□□□ -0.03
TNFRSF1A-215ENST00000543359 MYH9P35579 1960 aaKnown RBP14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 LINC01553A4QN01 128 aa14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 CENPBP07199 599 aaPredicted RBP14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 GHRP10912 638 aa14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 IGFBP4P22692 258 aa14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 AK2P54819 239 aa14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 MRPS6P82932 125 aaKnown RBP14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 Q4G0T1 1027 aa14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 GALNT17Q6IS24 598 aa14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 FAM117BQ6P1L5 589 aa14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 MTHFD1LQ6UB35 978 aa14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 RSPH3Q86UC2 560 aa14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 BLIDQ8IZY5 108 aa14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 TBCKQ8TEA7 893 aa14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 ARNTL2Q8WYA1 636 aa14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 APBB2Q92870 758 aa14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 ZBED2Q9BTP6 218 aa14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 COL25A1Q9BXS0 654 aaPredicted RBP14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 IFIH1Q9BYX4 1025 aaKnown RBP14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 FAM49AQ9H0Q0 323 aaPredicted RBP14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 AGO3Q9H9G7 860 aaKnown RBP14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 ZNF302Q9NR11 478 aa14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 CDY2AQ9Y6F7 541 aa14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 LOXHD1Q8IVV2 1947 aa14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 STK36Q9NRP7 1315 aa14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 TTC3P53804 2025 aa14.87□□□□□ -0.03
TNFRSF1A-215ENST00000543359 SMIM35A0A1B0GVV1 85 aa14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 BACH1O14867 736 aa14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 HBP1O60381 514 aa14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 AMHP03971 560 aa14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 ERVK-21P61565 698 aa14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 KRT76Q01546 638 aa14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 CCDC85BQ15834 202 aaPredicted RBP14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 FAM160B1Q5W0V3 765 aa14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 KRT40Q6A162 431 aa14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 MIS18BP1Q6P0N0 1132 aa14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 CPLX2Q6PUV4 134 aaKnown RBP14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 B3GNT9Q6UX72 402 aa14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 SMAP1Q8IYB5 467 aaPredicted RBP14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 MYOCDQ8IZQ8 938 aa14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 TNPO1Q92973 898 aaKnown RBP14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 GJA10Q969M2 543 aa14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 PHF20Q9BVI0 1012 aa14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 GJB4Q9NTQ9 266 aa14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 KCNJ14Q9UNX9 436 aa14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 INSL6Q9Y581 213 aa14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 PCDHA10Q9Y5I2 948 aa14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 SQORQ9Y6N5 450 aa14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 EVPLQ92817 2033 aa14.86□□□□□ -0.03
TNFRSF1A-215ENST00000543359 ENPP3O14638 875 aa14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 PSMD10O75832 226 aa14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 LARGE1O95461 756 aa14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 RPLP2P05387 115 aaKnown RBP14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 FDPSP14324 419 aaKnown RBP14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 KLRC1P26715 233 aa14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 TMEM62Q0P6H9 643 aa14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 GRB10Q13322 594 aa14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 ME3Q16798 604 aa14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 ZNF484Q5JVG2 852 aa14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 PDXDC2PQ6P474 469 aa14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 RTN4RL1Q86UN2 441 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 KIAA0319LQ8IZA0 1049 aa14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 CRIPAKQ8N1N5 446 aa14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 LINC01599Q8WXQ3 324 aa14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 PPM1EQ8WY54 764 aa14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 RIT2Q99578 217 aa14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 C22orf23Q9BZE7 217 aa14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 SLKQ9H2G2 1235 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 SUGCTQ9HAC7 445 aa14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 KDM3AQ9Y4C1 1321 aa14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 COL1A2P08123 1366 aa14.85□□□□□ -0.03
TNFRSF1A-215ENST00000543359 COL4A6Q14031 1691 aa14.84□□□□□ -0.03
TNFRSF1A-215ENST00000543359 ZNF862O60290 1169 aa14.84□□□□□ -0.03
TNFRSF1A-215ENST00000543359 CDKL5O76039 1030 aa14.84□□□□□ -0.03
TNFRSF1A-215ENST00000543359 TDP2O95551 362 aa14.84□□□□□ -0.03
TNFRSF1A-215ENST00000543359 C22orf31O95567 290 aa14.84□□□□□ -0.03
TNFRSF1A-215ENST00000543359 CD52P31358 61 aa14.84□□□□□ -0.03
TNFRSF1A-215ENST00000543359 ANKRD1Q15327 319 aa14.84□□□□□ -0.03
TNFRSF1A-215ENST00000543359 IER5Q5VY09 327 aa14.84□□□□□ -0.03
TNFRSF1A-215ENST00000543359 TSHZ1Q6ZSZ6 1077 aa14.84□□□□□ -0.03
TNFRSF1A-215ENST00000543359 NME8Q8N427 588 aa14.84□□□□□ -0.03
TNFRSF1A-215ENST00000543359 NECAB1Q8N987 351 aa14.84□□□□□ -0.03
TNFRSF1A-215ENST00000543359 ETNPPLQ8TBG4 499 aa14.84□□□□□ -0.03
TNFRSF1A-215ENST00000543359 BBXQ8WY36 941 aaPredicted RBP14.84□□□□□ -0.03
TNFRSF1A-215ENST00000543359 CELF4Q9BZC1 486 aaKnown RBP14.84□□□□□ -0.03
TNFRSF1A-215ENST00000543359 RC3H2Q9HBD1 1191 aaKnown RBP14.84□□□□□ -0.03
TNFRSF1A-215ENST00000543359 GABBR1Q9UBS5 961 aa14.84□□□□□ -0.03
TNFRSF1A-215ENST00000543359 IGSF9BQ9UPX0 1349 aa14.84□□□□□ -0.03
TNFRSF1A-215ENST00000543359 COL4A4P53420 1690 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms