RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 GNA11P29992 359 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 SLC16A2P36021 539 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 LONP1P36776 959 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 ACTN3Q08043 901 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 TTLL12Q14166 644 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 ABCB5Q2M3G0 1257 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 RNF187Q5TA31 235 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 SPECC1LQ69YQ0 1117 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 FAAH2Q6GMR7 532 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 CDAN1Q8IWY9 1227 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 NIM1KQ8IY84 436 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 KIRREL3Q8IZU9 778 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 FAM151AQ8WW52 585 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 PAGE5Q96GU1 130 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 TMEM260Q9NX78 707 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 GABBR1Q9UBS5 961 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 ATP8A1Q9Y2Q0 1164 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 ZBTB5O15062 677 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 DPYDQ12882 1025 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 NONOQ15233 471 aaKnown RBP eCLIP8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 DLGAP5Q15398 846 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 DALRD3Q5D0E6 543 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 FKBP1CQ5VVH2 108 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 KANK3Q6NY19 840 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 CCDC65Q8IXS2 484 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 TRMT44Q8IYL2 757 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 B4GALNT2Q8NHY0 566 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 CAPS2Q9BXY5 557 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 SLC7A5P2Q9GIP4 190 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 RIC8AQ9NPQ8 531 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 GINM1Q9NU53 330 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 HERC5Q9UII4 1024 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 ODF2LQ9ULJ1 636 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 MAPK8IP1Q9UQF2 711 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 A0A1W2PRG0 241 aa8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 LAD1O00515 517 aa8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 ZNF189O75820 626 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 PRPF6O94906 941 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 GH2P01242 217 aa8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 PRELPP51888 382 aa8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 TBC1D10BQ4KMP7 808 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 REXO1Q8N1G1 1221 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 LRRC15Q8TF66 581 aa8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 GMCL1Q96IK5 515 aa8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 MED15Q96RN5 788 aa8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 HDAC9Q9UKV0 1011 aa8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 HPCAL4Q9UM19 191 aa8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 NDUFAB1O14561 156 aa8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 ATP6V1G1O75348 118 aa8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 ADCY7P51828 1080 aa8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 SLFN13Q68D06 897 aa8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 RAD9BQ6WBX8 426 aa8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 FAM114A1Q8IWE2 563 aa8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 TBCKQ8TEA7 893 aa8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 ZKSCAN4Q969J2 545 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 TAOK3Q9H2K8 898 aa8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 POLD4Q9HCU8 107 aa8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 MAP3K20Q9NYL2 800 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 KLF15Q9UIH9 416 aa8.75□□□□□ -1.01
PDLIM5-221ENST00000542407 ZEB2O60315 1214 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 PARNO95453 639 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 NDUFB10O96000 172 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 ABL1P00519 1130 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 SSBP05455 408 aaKnown RBP eCLIP8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 CASP1P29466 404 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 PTGER2P43116 358 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 POU5F1Q01860 360 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 MAP3K10Q02779 954 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 ORC2Q13416 577 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 NAALADL2Q58DX5 795 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 NEK8Q86SG6 692 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 SLC43A3Q8NBI5 491 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 NACC2Q96BF6 587 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 NAPGQ99747 312 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 HOOK1Q9UJC3 728 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 ADGRG1Q9Y653 693 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 LTBP3Q9NS15 1303 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 PP2D1A8MPX8 630 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 AKR1B15C9JRZ8 316 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 F5H6K3 240 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 EIF3FO00303 357 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 WNT10BO00744 389 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 TBC1D12O60347 775 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 HARSP12081 509 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 SLC1A4P43007 532 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 MNX1P50219 401 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 ZNF132P52740 706 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 MRPL12P52815 198 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 ZNF280AP59817 542 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 FMR1Q06787 632 aaKnown RBP eCLIP8.74□□□□□ -1.013e-9■■■■■ 33
PDLIM5-221ENST00000542407 KLRC3Q07444 240 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 QRICH1Q2TAL8 776 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 KIAA1755Q5JYT7 1200 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 FAM83AQ86UY5 434 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 PPFIBP1Q86W92 1011 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 CAPZA3Q96KX2 299 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 MTMR9Q96QG7 549 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 TMEM39BQ9GZU3 492 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 TMOD2Q9NZR1 351 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms