RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 LRWD1Q9UFC0 647 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 PLXNA1Q9UIW2 1896 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 MKI67P46013 3256 aaKnown RBP8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 EML1O00423 815 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 CXCL11O14625 94 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 ZBTB39O15060 712 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 UPP2O95045 317 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 BMP6P22004 513 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 UBA7P41226 1012 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 STAT6P42226 847 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 RAD51AP2Q09MP3 1159 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 CUL4BQ13620 913 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 HSP90AA4PQ58FG1 418 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 ARHGEF16Q5VV41 709 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 ARL6IP4Q66PJ3 421 aaKnown RBP8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 PPP4R3AQ6IN85 833 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 Q6ZVU0 165 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 SAPCD2Q86UD0 394 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 CABP7Q86V35 215 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 PLA2G4DQ86XP0 818 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 ANKRD35Q8N283 1001 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 SNX29Q8TEQ0 813 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 HPS3Q969F9 1004 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 SH2D3AQ9BRG2 576 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 KCNMB3Q9NPA1 279 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 PXMP2Q9NR77 195 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 ABT1Q9ULW3 272 aaKnown RBP8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 PCDHA12Q9UN75 941 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 PCDHA5Q9Y5H7 936 aa8.68□□□□□ -1.02
AC005840.3-201ENST00000541888 SOBPA7XYQ1 873 aa8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 IGF2BP3O00425 579 aaKnown RBP eCLIP8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 GPR37L1O60883 481 aa8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 ATP9AO75110 1047 aa8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 BMP15O95972 392 aa8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 HOXA7P31268 230 aaPredicted RBP8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 LONP1P36776 959 aaKnown RBP8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 GRB10Q13322 594 aa8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 POSTNQ15063 836 aa8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 SASS6Q6UVJ0 657 aa8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 RBM43Q6ZSC3 357 aaKnown RBP8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 RASAL3Q86YV0 1011 aa8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 IGSF22Q8N9C0 903 aa8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 PAGE5Q96GU1 130 aa8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 PNMA5Q96PV4 448 aa8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 TSEN34Q9BSV6 310 aaKnown RBP8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 ACAD9Q9H845 621 aa8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 DISC1Q9NRI5 854 aa8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 RGL1Q9NZL6 768 aa8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 NXF1Q9UBU9 619 aaKnown RBP8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 MAPK8IP1Q9UQF2 711 aa8.67□□□□□ -1.02
AC005840.3-201ENST00000541888 LRRC37A2A6NM11 1700 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 NPHP3-ACAD11A0A0J9YXS1 232 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 FAM237AA0A1B0GTK4 181 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 TMEM150BA6NC51 233 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 E9PMD0 336 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 AP5Z1O43299 807 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 MED24O75448 989 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 FOSP01100 380 aaPredicted RBP8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 CCDC192P0DO97 292 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 PRPHP41219 470 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 USP11P51784 963 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 RAB15P59190 212 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 PSMC6P62333 389 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 SPIRE1Q08AE8 756 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 MCM6Q14566 821 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 CEP55Q53EZ4 464 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 TMEM63BQ5T3F8 832 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 CYP4F22Q6NT55 531 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 CEP57L1Q8IYX8 460 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 FAM177A1Q8N128 213 aaPredicted RBP8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 PDCD2LQ9BRP1 358 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 GLT8D2Q9H1C3 349 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 TMPRSS4Q9NRS4 437 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 KCNH7Q9NS40 1196 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 CPA4Q9UI42 421 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 RPTORQ8N122 1335 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 PASKQ96RG2 1323 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 CYP3A7-CYP3A51PA0A087WV96 503 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 SSBP05455 408 aaKnown RBP eCLIP8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 CETPP11597 493 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 CYP3A7P24462 503 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 GTF2A2P52657 109 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 ERVK-9P63128 1117 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 ERVK-24P63145 666 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 ITGB3BPQ13352 177 aaPredicted RBP8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 CTTNQ14247 550 aaKnown RBP8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 TMEM266Q2M3C6 531 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 TKFCQ3LXA3 575 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 LRCH2Q5VUJ6 765 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 RRAGBQ5VZM2 374 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 FASTKD5Q7L8L6 764 aaKnown RBP8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 DYMQ7RTS9 669 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 MCF2L2Q86YR7 1114 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 PDLIM2Q96JY6 352 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 ZNF577Q9BSK1 485 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 WRAP73Q9P2S5 460 aaPredicted RBP8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 VAV3Q9UKW4 847 aa8.66□□□□□ -1.02
AC005840.3-201ENST00000541888 ERVH48-1M5A8F1 160 aa8.65□□□□□ -1.02
AC005840.3-201ENST00000541888 IPO5O00410 1097 aaKnown RBP8.65□□□□□ -1.02
AC005840.3-201ENST00000541888 LAD1O00515 517 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms