RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 FAM20AQ96MK3 541 aa10.41□□□□□ -0.74
SNHG1-215ENST00000540904 FTOQ9C0B1 505 aaKnown RBP eCLIP10.41□□□□□ -0.74
SNHG1-215ENST00000540904 KCNMB3Q9NPA1 279 aa10.41□□□□□ -0.74
SNHG1-215ENST00000540904 MAFBQ9Y5Q3 323 aaPredicted RBP10.41□□□□□ -0.74
SNHG1-215ENST00000540904 RANBP2P49792 3224 aaKnown RBP10.41□□□□□ -0.74
SNHG1-215ENST00000540904 MBLAC1A4D2B0 266 aaPredicted RBP10.4□□□□□ -0.74
SNHG1-215ENST00000540904 H3BQV1 296 aa10.4□□□□□ -0.74
SNHG1-215ENST00000540904 RBAK-RBAKDNI3L0D1 243 aa10.4□□□□□ -0.74
SNHG1-215ENST00000540904 TBX3O15119 743 aa10.4□□□□□ -0.74
SNHG1-215ENST00000540904 HBP1O60381 514 aa10.4□□□□□ -0.74
SNHG1-215ENST00000540904 NEMFO60524 1076 aa10.4□□□□□ -0.74
SNHG1-215ENST00000540904 BAG4O95429 457 aaKnown RBP10.4□□□□□ -0.74
SNHG1-215ENST00000540904 PFKMP08237 780 aa10.4□□□□□ -0.74
SNHG1-215ENST00000540904 ATP4AP20648 1035 aa10.4□□□□□ -0.74
SNHG1-215ENST00000540904 MCM7P33993 719 aa10.4□□□□□ -0.74
SNHG1-215ENST00000540904 CALCRLQ16602 461 aa10.4□□□□□ -0.74
SNHG1-215ENST00000540904 UGCGQ16739 394 aa10.4□□□□□ -0.74
SNHG1-215ENST00000540904 MCTP1Q6DN14 999 aa10.4□□□□□ -0.74
SNHG1-215ENST00000540904 TAF2Q6P1X5 1199 aa10.4□□□□□ -0.74
SNHG1-215ENST00000540904 NOSTRINQ8IVI9 506 aa10.4□□□□□ -0.74
SNHG1-215ENST00000540904 SLFN12Q8IYM2 578 aa10.4□□□□□ -0.74
SNHG1-215ENST00000540904 RDM1Q8NG50 284 aa10.4□□□□□ -0.74
SNHG1-215ENST00000540904 HAS1Q92839 578 aa10.4□□□□□ -0.74
SNHG1-215ENST00000540904 VWCEQ96DN2 955 aa10.4□□□□□ -0.74
SNHG1-215ENST00000540904 FAM49AQ9H0Q0 323 aaPredicted RBP10.4□□□□□ -0.74
SNHG1-215ENST00000540904 IGSF9BQ9UPX0 1349 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 ZBBXA8MT70 800 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 RSPH10B2B2RC85 870 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 KIF28PB7ZC32 967 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 EML1O00423 815 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 ZNF862O60290 1169 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 NBNO60934 754 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 CAND2O75155 1236 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 PARNO95453 639 aaKnown RBP10.39□□□□□ -0.75
SNHG1-215ENST00000540904 RSPH10BP0C881 870 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 U2AF2P26368 475 aaKnown RBP eCLIP10.39□□□□□ -0.75
SNHG1-215ENST00000540904 KLRC1P26715 233 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 PRKCEQ02156 737 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 PPP2R5CQ13362 524 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 CUL4AQ13619 759 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 GPNMBQ14956 572 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 ZNF174Q15697 407 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 NCAPH2Q6IBW4 605 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 TRAF7Q6Q0C0 670 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 B3GNT9Q6UX72 402 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 RSPH3Q86UC2 560 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 DNAJB3Q8WWF6 145 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 BBXQ8WY36 941 aaPredicted RBP10.39□□□□□ -0.75
SNHG1-215ENST00000540904 HERVK_113Q902F9 699 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 FAM167AQ96KS9 214 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 MTIF3Q9H2K0 278 aaKnown RBP10.39□□□□□ -0.75
SNHG1-215ENST00000540904 CXXC1Q9P0U4 656 aaPredicted RBP10.39□□□□□ -0.75
SNHG1-215ENST00000540904 VAV3Q9UKW4 847 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 TRIOBPQ9H2D6 2365 aa10.39□□□□□ -0.75
SNHG1-215ENST00000540904 ZBTB42B2RXF5 422 aa10.38□□□□□ -0.75
SNHG1-215ENST00000540904 OATP04181 439 aa10.38□□□□□ -0.75
SNHG1-215ENST00000540904 ACTN1P12814 892 aa10.38□□□□□ -0.75
SNHG1-215ENST00000540904 TXKP42681 527 aa10.38□□□□□ -0.75
SNHG1-215ENST00000540904 NBR1Q14596 966 aa10.38□□□□□ -0.75
SNHG1-215ENST00000540904 MBTPS1Q14703 1052 aa10.38□□□□□ -0.75
SNHG1-215ENST00000540904 ZNF484Q5JVG2 852 aa10.38□□□□□ -0.75
SNHG1-215ENST00000540904 TTC38Q5R3I4 469 aa10.38□□□□□ -0.75
SNHG1-215ENST00000540904 RASIP1Q5U651 963 aa10.38□□□□□ -0.75
SNHG1-215ENST00000540904 LARP1BQ659C4 914 aaKnown RBP10.38□□□□□ -0.75
SNHG1-215ENST00000540904 FAM109BQ6ICB4 259 aaPredicted RBP10.38□□□□□ -0.75
SNHG1-215ENST00000540904 MTHFD1LQ6UB35 978 aa10.38□□□□□ -0.75
SNHG1-215ENST00000540904 BANK1Q8NDB2 785 aa10.38□□□□□ -0.75
SNHG1-215ENST00000540904 TTC12Q9H892 705 aaPredicted RBP10.38□□□□□ -0.75
SNHG1-215ENST00000540904 NRBP2Q9NSY0 501 aa10.38□□□□□ -0.75
SNHG1-215ENST00000540904 NOL7Q9UMY1 257 aaKnown RBP10.38□□□□□ -0.75
SNHG1-215ENST00000540904 PCDHA12Q9UN75 941 aa10.38□□□□□ -0.75
SNHG1-215ENST00000540904 PCDHA2Q9Y5H9 948 aa10.38□□□□□ -0.75
SNHG1-215ENST00000540904 COL1A2P08123 1366 aa10.38□□□□□ -0.75
SNHG1-215ENST00000540904 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.37□□□□□ -0.75
SNHG1-215ENST00000540904 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.37□□□□□ -0.75
SNHG1-215ENST00000540904 GRXCR1A8MXD5 290 aa10.37□□□□□ -0.75
SNHG1-215ENST00000540904 K7ELQ4 463 aaPredicted RBP10.37□□□□□ -0.75
SNHG1-215ENST00000540904 CHRNA1P02708 482 aa10.37□□□□□ -0.75
SNHG1-215ENST00000540904 CXCL10P02778 98 aa10.37□□□□□ -0.75
SNHG1-215ENST00000540904 TRAPPC10P48553 1259 aa10.37□□□□□ -0.75
SNHG1-215ENST00000540904 PSMC5P62195 406 aa10.37□□□□□ -0.75
SNHG1-215ENST00000540904 SMAD3P84022 425 aaKnown RBP10.37□□□□□ -0.75
SNHG1-215ENST00000540904 TMEM62Q0P6H9 643 aa10.37□□□□□ -0.75
SNHG1-215ENST00000540904 RPAINQ86UA6 219 aa10.37□□□□□ -0.75
SNHG1-215ENST00000540904 METTL13Q8N6R0 699 aa10.37□□□□□ -0.75
SNHG1-215ENST00000540904 MTMR9Q96QG7 549 aa10.37□□□□□ -0.75
SNHG1-215ENST00000540904 OSBPL7Q9BZF2 842 aa10.37□□□□□ -0.75
SNHG1-215ENST00000540904 TMEM60Q9H2L4 133 aa10.37□□□□□ -0.75
SNHG1-215ENST00000540904 RGL1Q9NZL6 768 aa10.37□□□□□ -0.75
SNHG1-215ENST00000540904 SEPT9Q9UHD8 586 aaPredicted RBP10.37□□□□□ -0.75
SNHG1-215ENST00000540904 CEP131Q9UPN4 1083 aa10.37□□□□□ -0.75
SNHG1-215ENST00000540904 CDY2AQ9Y6F7 541 aa10.37□□□□□ -0.75
SNHG1-215ENST00000540904 SLC4A7Q9Y6M7 1214 aa10.37□□□□□ -0.75
SNHG1-215ENST00000540904 SMIM35A0A1B0GVV1 85 aa10.36□□□□□ -0.75
SNHG1-215ENST00000540904 TMEM150BA6NC51 233 aa10.36□□□□□ -0.75
SNHG1-215ENST00000540904 DDX11L8A8MPP1 907 aa10.36□□□□□ -0.75
SNHG1-215ENST00000540904 M0QZ92 97 aa10.36□□□□□ -0.75
SNHG1-215ENST00000540904 BAIAP3O94812 1187 aa10.36□□□□□ -0.75
SNHG1-215ENST00000540904 C22orf31O95567 290 aa10.36□□□□□ -0.75
SNHG1-215ENST00000540904 RPLP2P05387 115 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms