RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	CCDC70	Q6NSX1	233 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TYW1B	Q6NUM6	668 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CREG2	Q8IUH2	290 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	RASGRP4	Q8TDF6	673 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ZBED3	Q96IU2	234 aa	Predicted RBP	6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	RNF26	Q9BY78	433 aa	Predicted RBP	6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ZNHIT6	Q9NWK9	470 aa	Known RBP	6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SLX4	Q8IY92	1834 aa		6.23	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	NOP56	O00567	594 aa	Known RBP	6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ATP2C2	O75185	946 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	FAM153B	P0C7A2	387 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	NAP1L1	P55209	391 aa	Known RBP	6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ACTN3	Q08043	901 aa	Predicted RBP	6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	NNT	Q13423	1086 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TRIM14	Q14142	442 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	GRM4	Q14833	912 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TRADD	Q15628	312 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CDC37	Q16543	378 aa	Predicted RBP	6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	FAM153C	Q494X1	144 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	USH1G	Q495M9	461 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CCDC181	Q5TID7	509 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TATDN1	Q6P1N9	297 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PDXDC2P	Q6P474	469 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SPATA4	Q8NEY3	305 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	RNPC3	Q96LT9	517 aa	Known RBP	6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ZIM3	Q96PE6	472 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CEP89	Q96ST8	783 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PYM1	Q9BRP8	204 aa	Known RBP	6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PSTPIP2	Q9H939	334 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	MAGEC2	Q9UBF1	373 aa	Predicted RBP	6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	FAM153A	Q9UHL3	310 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	RASSF10	A6NK89	507 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	LGALS16	A8MUM7	142 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	BUB1	O43683	1085 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	GTPBP6	O43824	516 aa	Predicted RBP	6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	HSF2BP	O75031	334 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CYLC1	P35663	651 aa	Predicted RBP	6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	STAT6	P42226	847 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ZNF543	Q08ER8	600 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SWT1	Q5T5J6	900 aa	Known RBP	6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ZNF658	Q5TYW1	1059 aa	Predicted RBP	6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	KCTD1	Q719H9	257 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	REXO1	Q8N1G1	1221 aa	Known RBP	6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	HPS3	Q969F9	1004 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CCDC42	Q96M95	316 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	DNAJC7	Q99615	494 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CAPN11	Q9UMQ6	739 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SCAF8	Q9UPN6	1271 aa	Known RBP	6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	NOD1	Q9Y239	953 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ZBTB5	O15062	677 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	HPD	P32754	393 aa	Predicted RBP	6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CARS	P49589	748 aa	Known RBP	6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	EVX2	Q03828	476 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	IFT88	Q13099	833 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PKN2	Q16513	984 aa	Known RBP	6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	LDLRAD1	Q5T700	205 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	RNF207	Q6ZRF8	634 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SAPCD2	Q86UD0	394 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	GIMAP8	Q8ND71	665 aa	Predicted RBP	6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	FERMT2	Q96AC1	680 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SH3GL2	Q99962	352 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PHF20	Q9BVI0	1012 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	FAM207A	Q9NSI2	230 aa	Predicted RBP	6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	MAP3K20	Q9NYL2	800 aa	Known RBP	6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ZNF112	Q9UJU3	913 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PPP1R9A	Q9ULJ8	1098 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	NFU1	Q9UMS0	254 aa		6.22	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	MYH8	P13535	1937 aa		6.21	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	IRF6	O14896	467 aa		6.21	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	OPA1	O60313	960 aa		6.21	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	NMT2	O60551	498 aa		6.21	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SCG2	P13521	617 aa		6.21	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CCND2	P30279	289 aa		6.21	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	MTIF2	P46199	727 aa	Known RBP	6.21	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	NONO	Q15233	471 aa	Known RBP eCLIP	6.21	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SPA17	Q15506	151 aa		6.21	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PTPRO	Q16827	1216 aa		6.21	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ADGRA1	Q86SQ6	560 aa		6.21	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	CSGALNACT2	Q8N6G5	542 aa		6.21	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SHCBP1	Q8NEM2	672 aa		6.21	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	ZNF507	Q8TCN5	953 aa		6.21	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	NSUN6	Q8TEA1	469 aa	Known RBP	6.21	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	TUBGCP2	Q9BSJ2	902 aa		6.21	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	RBM12	Q9NTZ6	932 aa	Known RBP	6.21	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	PRKAG2	Q9UGJ0	569 aa		6.21	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	SNX12	Q9UMY4	172 aa		6.21	□□□□□ -1.41
RAPGEF4-215	ENST00000540783	GOLGA8K	D6RF30	607 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	MYCL	P12524	364 aa	Predicted RBP	6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	VCAM1	P19320	739 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	AP3B2	Q13367	1082 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ENOX2	Q16206	610 aa	Known RBP	6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	RASAL3	Q86YV0	1011 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ADSSL1	Q8N142	457 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ENAH	Q8N8S7	591 aa	Predicted RBP	6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	MKL1	Q969V6	931 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SPZ1	Q9BXG8	430 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	UBA5	Q9GZZ9	404 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ASCC2	Q9H1I8	757 aa	Predicted RBP	6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	AZI2	Q9H6S1	392 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PPAN	Q9NQ55	473 aa	Known RBP	6.21	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms