RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 CDH23Q9H251 3354 aa11.9□□□□□ -0.51
ATL3-204ENST00000540699 A0A0U1RQG5 324 aaPredicted RBP11.89□□□□□ -0.51
ATL3-204ENST00000540699 VWA3AA6NCI4 1184 aa11.89□□□□□ -0.51
ATL3-204ENST00000540699 ARVCFO00192 962 aa11.89□□□□□ -0.51
ATL3-204ENST00000540699 GAS7O60861 476 aa11.89□□□□□ -0.51
ATL3-204ENST00000540699 KINO60870 393 aaKnown RBP11.89□□□□□ -0.51
ATL3-204ENST00000540699 ZNF286BP0CG31 522 aa11.89□□□□□ -0.51
ATL3-204ENST00000540699 TCF7P36402 384 aaPredicted RBP11.89□□□□□ -0.51
ATL3-204ENST00000540699 LONP1P36776 959 aaKnown RBP11.89□□□□□ -0.51
ATL3-204ENST00000540699 SYKP43405 635 aa11.89□□□□□ -0.51
ATL3-204ENST00000540699 NFRKBQ6P4R8 1299 aa11.89□□□□□ -0.51
ATL3-204ENST00000540699 ABHD15Q6UXT9 468 aa11.89□□□□□ -0.51
ATL3-204ENST00000540699 ANKRD33Q7Z3H0 272 aa11.89□□□□□ -0.51
ATL3-204ENST00000540699 SESTD1Q86VW0 696 aa11.89□□□□□ -0.51
ATL3-204ENST00000540699 SMAP1Q8IYB5 467 aaPredicted RBP11.89□□□□□ -0.51
ATL3-204ENST00000540699 SLFN12Q8IYM2 578 aa11.89□□□□□ -0.51
ATL3-204ENST00000540699 RDM1Q8NG50 284 aa11.89□□□□□ -0.51
ATL3-204ENST00000540699 PCYT2Q99447 389 aa11.89□□□□□ -0.51
ATL3-204ENST00000540699 KATNAL1Q9BW62 490 aa11.89□□□□□ -0.51
ATL3-204ENST00000540699 TEKT3Q9BXF9 490 aa11.89□□□□□ -0.51
ATL3-204ENST00000540699 TNMDQ9H2S6 317 aa11.89□□□□□ -0.51
ATL3-204ENST00000540699 FAM13BQ9NYF5 915 aa11.89□□□□□ -0.51
ATL3-204ENST00000540699 VAV3Q9UKW4 847 aa11.89□□□□□ -0.51
ATL3-204ENST00000540699 KCNH3Q9ULD8 1083 aa11.89□□□□□ -0.51
ATL3-204ENST00000540699 A0A087X0B3 334 aa11.88□□□□□ -0.51
ATL3-204ENST00000540699 H3BRB1 525 aa11.88□□□□□ -0.51
ATL3-204ENST00000540699 SUPT20HL2P0C7V6 817 aa11.88□□□□□ -0.51
ATL3-204ENST00000540699 HOXC8P31273 242 aa11.88□□□□□ -0.51
ATL3-204ENST00000540699 PSEN2P49810 448 aa11.88□□□□□ -0.51
ATL3-204ENST00000540699 PSMC6P62333 389 aa11.88□□□□□ -0.51
ATL3-204ENST00000540699 MDM2Q00987 491 aaPredicted RBP11.88□□□□□ -0.51
ATL3-204ENST00000540699 PTPN11Q06124 597 aaPredicted RBP11.88□□□□□ -0.51
ATL3-204ENST00000540699 SPIRE1Q08AE8 756 aa11.88□□□□□ -0.51
ATL3-204ENST00000540699 PPP2R5CQ13362 524 aa11.88□□□□□ -0.51
ATL3-204ENST00000540699 ITGA7Q13683 1181 aa11.88□□□□□ -0.51
ATL3-204ENST00000540699 CAMK4Q16566 473 aa11.88□□□□□ -0.51
ATL3-204ENST00000540699 NBPF20Q3BBV1 942 aa11.88□□□□□ -0.51
ATL3-204ENST00000540699 DTHD1Q6ZMT9 781 aa11.88□□□□□ -0.51
ATL3-204ENST00000540699 Q7L0L9 218 aa11.88□□□□□ -0.51
ATL3-204ENST00000540699 ELOA2Q8IYF1 753 aaPredicted RBP11.88□□□□□ -0.51
ATL3-204ENST00000540699 AFAP1L1Q8TED9 768 aa11.88□□□□□ -0.51
ATL3-204ENST00000540699 SYMPKQ92797 1274 aaKnown RBP11.88□□□□□ -0.51
ATL3-204ENST00000540699 GJA10Q969M2 543 aa11.88□□□□□ -0.51
ATL3-204ENST00000540699 TOX2Q96NM4 488 aa11.88□□□□□ -0.51
ATL3-204ENST00000540699 UNC45AQ9H3U1 944 aa11.88□□□□□ -0.51
ATL3-204ENST00000540699 TUT1Q9H6E5 874 aaKnown RBP11.88□□□□□ -0.51
ATL3-204ENST00000540699 PRUNE2Q8WUY3 3088 aa11.88□□□□□ -0.51
ATL3-204ENST00000540699 MROH7Q68CQ1 1323 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 WDR64B1ANS9 1081 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 DDX39AO00148 427 aaKnown RBP11.87□□□□□ -0.51
ATL3-204ENST00000540699 SFNP31947 248 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 SLC26A2P50443 739 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 FXR2P51116 673 aaKnown RBP eCLIP11.87□□□□□ -0.51
ATL3-204ENST00000540699 JAK3P52333 1124 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 ATN1P54259 1190 aaPredicted RBP11.87□□□□□ -0.51
ATL3-204ENST00000540699 RTP1P59025 263 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 SP4Q02446 784 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 MFSD10Q14728 455 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 CALCRLQ16602 461 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 KIAA0753Q2KHM9 967 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 PLPPR4Q7Z2D5 763 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 TRIM50Q86XT4 487 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 CCDC60Q8IWA6 550 aaPredicted RBP11.87□□□□□ -0.51
ATL3-204ENST00000540699 FAM126BQ8IXS8 530 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 IGSF22Q8N9C0 903 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 EPSTI1Q96J88 318 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 UIMC1Q96RL1 719 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 SMARCAD1Q9H4L7 1026 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 ERAP1Q9NZ08 941 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 ZNF215Q9UL58 517 aaPredicted RBP11.87□□□□□ -0.51
ATL3-204ENST00000540699 PCDHA10Q9Y5I2 948 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 ARID2Q68CP9 1835 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 EVPLQ92817 2033 aa11.87□□□□□ -0.51
ATL3-204ENST00000540699 IGSF9BQ9UPX0 1349 aa11.86□□□□□ -0.51
ATL3-204ENST00000540699 ACTN4O43707 911 aaKnown RBP11.86□□□□□ -0.51
ATL3-204ENST00000540699 CD4P01730 458 aa11.86□□□□□ -0.51
ATL3-204ENST00000540699 PSAPP07602 524 aa11.86□□□□□ -0.51
ATL3-204ENST00000540699 TLE2Q04725 743 aa11.86□□□□□ -0.51
ATL3-204ENST00000540699 E2F4Q16254 413 aa11.86□□□□□ -0.51
ATL3-204ENST00000540699 TRIM60Q495X7 471 aa11.86□□□□□ -0.51
ATL3-204ENST00000540699 LONRF3Q496Y0 759 aa11.86□□□□□ -0.51
ATL3-204ENST00000540699 UTP14CQ5TAP6 766 aaKnown RBP11.86□□□□□ -0.51
ATL3-204ENST00000540699 MIS18BP1Q6P0N0 1132 aa11.86□□□□□ -0.51
ATL3-204ENST00000540699 KRBA2Q6ZNG9 492 aa11.86□□□□□ -0.51
ATL3-204ENST00000540699 CKAP2LQ8IYA6 745 aa11.86□□□□□ -0.51
ATL3-204ENST00000540699 VTI1AQ96AJ9 217 aa11.86□□□□□ -0.51
ATL3-204ENST00000540699 AK8Q96MA6 479 aa11.86□□□□□ -0.51
ATL3-204ENST00000540699 CCSER1Q9C0I3 900 aa11.86□□□□□ -0.51
ATL3-204ENST00000540699 DISC1Q9NRI5 854 aa11.86□□□□□ -0.51
ATL3-204ENST00000540699 GTF2IRD1Q9UHL9 959 aa11.86□□□□□ -0.51
ATL3-204ENST00000540699 TCEAL9Q9UHQ7 104 aa11.86□□□□□ -0.51
ATL3-204ENST00000540699 MAFBQ9Y5Q3 323 aaPredicted RBP11.86□□□□□ -0.51
ATL3-204ENST00000540699 TANC1Q9C0D5 1861 aa11.86□□□□□ -0.51
ATL3-204ENST00000540699 LOXHD1Q8IVV2 1947 aa11.86□□□□□ -0.51
ATL3-204ENST00000540699 VCANP13611 3396 aa11.85□□□□□ -0.51
ATL3-204ENST00000540699 GOLGA6L3A6NEY3 463 aa11.85□□□□□ -0.51
ATL3-204ENST00000540699 EML1O00423 815 aa11.85□□□□□ -0.51
ATL3-204ENST00000540699 POLR2DO15514 142 aaKnown RBP11.85□□□□□ -0.51
ATL3-204ENST00000540699 STAT5BP51692 787 aa11.85□□□□□ -0.51
ATL3-204ENST00000540699 ADAM17P78536 824 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms