RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 FAM160B1Q5W0V3 765 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 GDF6Q6KF10 455 aaPredicted RBP7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 PLPPR4Q7Z2D5 763 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 MIER3Q7Z3K6 550 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 C7orf31Q8N865 590 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 GLG1Q92896 1179 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 CTAGE1Q96RT6 745 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 RNPEPQ9H4A4 650 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 SMARCAD1Q9H4L7 1026 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 AZI2Q9H6S1 392 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 ZNF302Q9NR11 478 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 DISC1Q9NRI5 854 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 HDAC6Q9UBN7 1215 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 TBX21Q9UL17 535 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 SAMM50Q9Y512 469 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 PCDHA10Q9Y5I2 948 aa7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 MAFBQ9Y5Q3 323 aaPredicted RBP7.86□□□□□ -1.15
LPCAT3-209ENST00000540060 DCDC2CA8MYV0 355 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 LAD1O00515 517 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 BACH1O14867 736 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 TLR3O15455 904 aaKnown RBP7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 ZNF862O60290 1169 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 MARCH6O60337 910 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 F13A1P00488 732 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 ZSCAN22P10073 491 aaPredicted RBP7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 ATP4AP20648 1035 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 PRPHP41219 470 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 TXKP42681 527 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 ADAM17P78536 824 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 ATP2C1P98194 919 aaPredicted RBP7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 PTGDRQ13258 359 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 PLCB4Q15147 1175 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 NCAPH2Q6IBW4 605 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 SWSAP1Q6NVH7 229 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 PDXDC2PQ6P474 469 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 FAM173BQ6P4H8 233 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 SH3RF1Q7Z6J0 888 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 ATP8B4Q8TF62 1192 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 LMBR1Q8WVP7 490 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 DPF3Q92784 378 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 FTOQ9C0B1 505 aaKnown RBP eCLIP7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 TRPV6Q9H1D0 765 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 ZSCAN16Q9H4T2 348 aaPredicted RBP7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 TTC12Q9H892 705 aaPredicted RBP7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 TRMT13Q9NUP7 481 aaKnown RBP7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 GABBR1Q9UBS5 961 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 PCDHA12Q9UN75 941 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 PTPRSQ13332 1948 aa7.85□□□□□ -1.15
LPCAT3-209ENST00000540060 COL1A2P08123 1366 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 NRCAMQ92823 1304 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 C17orf102A2RUQ5 167 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 TRIM43BA6NCK2 446 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 ZBTB42B2RXF5 422 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 KIAA0355O15063 1070 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 BRD1O95696 1058 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 OATP04181 439 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 SYN1P17600 705 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 DDIT3P35638 169 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 ZNF200P98182 395 aaPredicted RBP7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 PRKCEQ02156 737 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 PPFIA1Q13136 1202 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 EPHA7Q15375 998 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 SF3A1Q15459 793 aaKnown RBP7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 GRIK4Q16099 956 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 PTGISQ16647 500 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 MARCH8Q5T0T0 291 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 IGSF22Q8N9C0 903 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 BANK1Q8NDB2 785 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 DHX38Q92620 1227 aaKnown RBP7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 ATP6V0A1Q93050 837 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 TRIM43Q96BQ3 446 aaPredicted RBP7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 LXNQ9BS40 222 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 PRDM5Q9NQX1 630 aaPredicted RBP7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 SETD4Q9NVD3 440 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 WRAP73Q9P2S5 460 aaPredicted RBP7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 NR2E3Q9Y5X4 410 aa7.84□□□□□ -1.15
LPCAT3-209ENST00000540060 LAMA3Q16787 3333 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 GBF1Q92538 1859 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 UMODL1Q5DID0 1318 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 MICAL3Q7RTP6 2002 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 MYH11P35749 1972 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 MBLAC1A4D2B0 266 aaPredicted RBP7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 TREHO43280 583 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 HBP1O60381 514 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 STBD1O95210 358 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 BMP15O95972 392 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 P4HBP07237 508 aaKnown RBP7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 CYP2C9P11712 490 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 INSRRP14616 1297 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 ITGB8P26012 769 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 ANP32AP39687 249 aaKnown RBP7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 TECP42680 631 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 QARSP47897 775 aaKnown RBP7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 PSMC5P62195 406 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 CYP4A11Q02928 519 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 RBL2Q08999 1139 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 PTK7Q13308 1070 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 PTPAQ15257 358 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 IL17AQ16552 155 aa7.83□□□□□ -1.16
LPCAT3-209ENST00000540060 TMEM266Q2M3C6 531 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms