RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 NAP1L4Q99733 375 aaKnown RBP20.65■□□□□ 0.9
SNRPA1-203ENST00000540017 FTOQ9C0B1 505 aaKnown RBP eCLIP20.65■□□□□ 0.9
SNRPA1-203ENST00000540017 GRXCR1A8MXD5 290 aa20.64■□□□□ 0.89
SNRPA1-203ENST00000540017 RSPH10B2B2RC85 870 aa20.64■□□□□ 0.89
SNRPA1-203ENST00000540017 EML1O00423 815 aa20.64■□□□□ 0.89
SNRPA1-203ENST00000540017 HBP1O60381 514 aa20.64■□□□□ 0.89
SNRPA1-203ENST00000540017 CXCL10P02778 98 aa20.64■□□□□ 0.89
SNRPA1-203ENST00000540017 RSPH10BP0C881 870 aa20.64■□□□□ 0.89
SNRPA1-203ENST00000540017 SFNP31947 248 aa20.64■□□□□ 0.89
SNRPA1-203ENST00000540017 JAK3P52333 1124 aa20.64■□□□□ 0.89
SNRPA1-203ENST00000540017 MIER3Q7Z3K6 550 aa20.64■□□□□ 0.89
SNRPA1-203ENST00000540017 DNAJB3Q8WWF6 145 aa20.64■□□□□ 0.89
SNRPA1-203ENST00000540017 FOXP1Q9H334 677 aaPredicted RBP20.64■□□□□ 0.89
SNRPA1-203ENST00000540017 TBX3O15119 743 aa20.63■□□□□ 0.89
SNRPA1-203ENST00000540017 ATP2B1P20020 1258 aa20.63■□□□□ 0.89
SNRPA1-203ENST00000540017 GJB2P29033 226 aa20.63■□□□□ 0.89
SNRPA1-203ENST00000540017 RPAINQ86UA6 219 aa20.63■□□□□ 0.89
SNRPA1-203ENST00000540017 CKAP2LQ8IYA6 745 aa20.63■□□□□ 0.89
SNRPA1-203ENST00000540017 MYH9P35579 1960 aaKnown RBP20.63■□□□□ 0.89
SNRPA1-203ENST00000540017 CAND2O75155 1236 aa20.62■□□□□ 0.89
SNRPA1-203ENST00000540017 PARNO95453 639 aaKnown RBP20.62■□□□□ 0.89
SNRPA1-203ENST00000540017 CHRNA1P02708 482 aa20.62■□□□□ 0.89
SNRPA1-203ENST00000540017 KLRC1P26715 233 aa20.62■□□□□ 0.89
SNRPA1-203ENST00000540017 SMAD3P84022 425 aaKnown RBP20.62■□□□□ 0.89
SNRPA1-203ENST00000540017 SPIRE1Q08AE8 756 aa20.62■□□□□ 0.89
SNRPA1-203ENST00000540017 PPP2R5CQ13362 524 aa20.62■□□□□ 0.89
SNRPA1-203ENST00000540017 FAM26DQ5JW98 314 aa20.62■□□□□ 0.89
SNRPA1-203ENST00000540017 TAF2Q6P1X5 1199 aa20.62■□□□□ 0.89
SNRPA1-203ENST00000540017 MTHFD1LQ6UB35 978 aa20.62■□□□□ 0.89
SNRPA1-203ENST00000540017 RDM1Q8NG50 284 aa20.62■□□□□ 0.89
SNRPA1-203ENST00000540017 BBXQ8WY36 941 aaPredicted RBP20.62■□□□□ 0.89
SNRPA1-203ENST00000540017 TNPO1Q92973 898 aaKnown RBP20.62■□□□□ 0.89
SNRPA1-203ENST00000540017 PCDHA2Q9Y5H9 948 aa20.62■□□□□ 0.89
SNRPA1-203ENST00000540017 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.61■□□□□ 0.89
SNRPA1-203ENST00000540017 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.61■□□□□ 0.89
SNRPA1-203ENST00000540017 ZBBXA8MT70 800 aa20.61■□□□□ 0.89
SNRPA1-203ENST00000540017 STBD1O95210 358 aa20.61■□□□□ 0.89
SNRPA1-203ENST00000540017 U2AF2P26368 475 aaKnown RBP eCLIP20.61■□□□□ 0.892e-7■■■□□ 14.8
SNRPA1-203ENST00000540017 PRKCEQ02156 737 aa20.61■□□□□ 0.89
SNRPA1-203ENST00000540017 MGAT3Q09327 533 aa20.61■□□□□ 0.89
SNRPA1-203ENST00000540017 CUL4AQ13619 759 aa20.61■□□□□ 0.89
SNRPA1-203ENST00000540017 ZNF484Q5JVG2 852 aa20.61■□□□□ 0.89
SNRPA1-203ENST00000540017 NOSTRINQ8IVI9 506 aa20.61■□□□□ 0.89
SNRPA1-203ENST00000540017 FAM49AQ9H0Q0 323 aaPredicted RBP20.61■□□□□ 0.89
SNRPA1-203ENST00000540017 TMEM60Q9H2L4 133 aa20.61■□□□□ 0.89
SNRPA1-203ENST00000540017 COL1A2P08123 1366 aa20.6■□□□□ 0.89
SNRPA1-203ENST00000540017 OATP04181 439 aa20.6■□□□□ 0.89
SNRPA1-203ENST00000540017 MCM7P33993 719 aa20.6■□□□□ 0.89
SNRPA1-203ENST00000540017 CALCRLQ16602 461 aa20.6■□□□□ 0.89
SNRPA1-203ENST00000540017 Q7L0L9 218 aa20.6■□□□□ 0.89
SNRPA1-203ENST00000540017 BANK1Q8NDB2 785 aa20.6■□□□□ 0.89
SNRPA1-203ENST00000540017 MTMR9Q96QG7 549 aa20.6■□□□□ 0.89
SNRPA1-203ENST00000540017 SMC3Q9UQE7 1217 aa20.6■□□□□ 0.89
SNRPA1-203ENST00000540017 SIP14410 1827 aa20.6■□□□□ 0.89
SNRPA1-203ENST00000540017 TMEM150BA6NC51 233 aa20.59■□□□□ 0.89
SNRPA1-203ENST00000540017 MARCH6O60337 910 aa20.59■□□□□ 0.89
SNRPA1-203ENST00000540017 NEMFO60524 1076 aa20.59■□□□□ 0.89
SNRPA1-203ENST00000540017 C22orf31O95567 290 aa20.59■□□□□ 0.89
SNRPA1-203ENST00000540017 ACTN1P12814 892 aa20.59■□□□□ 0.89
SNRPA1-203ENST00000540017 PBX2P40425 430 aa20.59■□□□□ 0.89
SNRPA1-203ENST00000540017 NBR1Q14596 966 aa20.59■□□□□ 0.89
SNRPA1-203ENST00000540017 PLEKHG4Q58EX7 1191 aa20.59■□□□□ 0.89
SNRPA1-203ENST00000540017 GPR153Q6NV75 609 aa20.59■□□□□ 0.89
SNRPA1-203ENST00000540017 CNKSR3Q6P9H4 555 aa20.59■□□□□ 0.89
SNRPA1-203ENST00000540017 SLFN12Q8IYM2 578 aa20.59■□□□□ 0.89
SNRPA1-203ENST00000540017 DBF4BQ8NFT6 615 aa20.59■□□□□ 0.89
SNRPA1-203ENST00000540017 MTIF3Q9H2K0 278 aaKnown RBP20.59■□□□□ 0.89
SNRPA1-203ENST00000540017 WRAP73Q9P2S5 460 aaPredicted RBP20.59■□□□□ 0.89
SNRPA1-203ENST00000540017 KIF3AQ9Y496 699 aa20.59■□□□□ 0.89
SNRPA1-203ENST00000540017 SLC4A7Q9Y6M7 1214 aa20.59■□□□□ 0.89
SNRPA1-203ENST00000540017 SMIM35A0A1B0GVV1 85 aa20.58■□□□□ 0.89
SNRPA1-203ENST00000540017 BAG4O95429 457 aaKnown RBP20.58■□□□□ 0.89
SNRPA1-203ENST00000540017 TOB1P50616 345 aaPredicted RBP20.58■□□□□ 0.89
SNRPA1-203ENST00000540017 TMEM62Q0P6H9 643 aa20.58■□□□□ 0.89
SNRPA1-203ENST00000540017 GNL2Q13823 731 aaKnown RBP20.58■□□□□ 0.89
SNRPA1-203ENST00000540017 ZNF174Q15697 407 aa20.58■□□□□ 0.89
SNRPA1-203ENST00000540017 NCAPH2Q6IBW4 605 aa20.58■□□□□ 0.89
SNRPA1-203ENST00000540017 RSPH3Q86UC2 560 aa20.58■□□□□ 0.89
SNRPA1-203ENST00000540017 KIAA0319LQ8IZA0 1049 aa20.58■□□□□ 0.89
SNRPA1-203ENST00000540017 FAM167AQ96KS9 214 aa20.58■□□□□ 0.89
SNRPA1-203ENST00000540017 PBX4Q9BYU1 374 aa20.58■□□□□ 0.89
SNRPA1-203ENST00000540017 NRBP2Q9NSY0 501 aa20.58■□□□□ 0.89
SNRPA1-203ENST00000540017 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.58■□□□□ 0.89
SNRPA1-203ENST00000540017 CDY2AQ9Y6F7 541 aa20.58■□□□□ 0.89
SNRPA1-203ENST00000540017 TXKP42681 527 aa20.57■□□□□ 0.88
SNRPA1-203ENST00000540017 MRPS6P82932 125 aaKnown RBP20.57■□□□□ 0.88
SNRPA1-203ENST00000540017 TARBP2Q15633 366 aaKnown RBP20.57■□□□□ 0.88
SNRPA1-203ENST00000540017 CEP89Q96ST8 783 aa20.57■□□□□ 0.88
SNRPA1-203ENST00000540017 SH2D3AQ9BRG2 576 aa20.57■□□□□ 0.88
SNRPA1-203ENST00000540017 TTC12Q9H892 705 aaPredicted RBP20.57■□□□□ 0.88
SNRPA1-203ENST00000540017 RGL1Q9NZL6 768 aa20.57■□□□□ 0.88
SNRPA1-203ENST00000540017 PCDHA12Q9UN75 941 aa20.57■□□□□ 0.88
SNRPA1-203ENST00000540017 EVPLQ92817 2033 aa20.56■□□□□ 0.88
SNRPA1-203ENST00000540017 BAIAP3O94812 1187 aa20.56■□□□□ 0.88
SNRPA1-203ENST00000540017 SLC34A2O95436 690 aa20.56■□□□□ 0.88
SNRPA1-203ENST00000540017 GHRP10912 638 aa20.56■□□□□ 0.88
SNRPA1-203ENST00000540017 ATP2A2P16615 1042 aaKnown RBP20.56■□□□□ 0.88
SNRPA1-203ENST00000540017 DNAJB2P25686 324 aa20.56■□□□□ 0.88
SNRPA1-203ENST00000540017 RABGGTBP53611 331 aa20.56■□□□□ 0.88
SNRPA1-203ENST00000540017 WDR5P61964 334 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms