RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 SH2D3AQ9BRG2 576 aa17.74■□□□□ 0.43
RPAIN-206ENST00000539417 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.74■□□□□ 0.43
RPAIN-206ENST00000539417 RGL1Q9NZL6 768 aa17.74■□□□□ 0.43
RPAIN-206ENST00000539417 NOL7Q9UMY1 257 aaKnown RBP17.74■□□□□ 0.43
RPAIN-206ENST00000539417 TANC1Q9C0D5 1861 aa17.73■□□□□ 0.43
RPAIN-206ENST00000539417 MBLAC1A4D2B0 266 aaPredicted RBP17.73■□□□□ 0.43
RPAIN-206ENST00000539417 POTEMA6NI47 508 aa17.73■□□□□ 0.43
RPAIN-206ENST00000539417 BAG4O95429 457 aaKnown RBP17.73■□□□□ 0.43
RPAIN-206ENST00000539417 IQCF3P0C7M6 154 aa17.73■□□□□ 0.43
RPAIN-206ENST00000539417 TRAPPC10P48553 1259 aa17.73■□□□□ 0.43
RPAIN-206ENST00000539417 PRKCEQ02156 737 aa17.73■□□□□ 0.43
RPAIN-206ENST00000539417 FPGSQ05932 587 aa17.73■□□□□ 0.43
RPAIN-206ENST00000539417 RESTQ13127 1097 aa17.73■□□□□ 0.43
RPAIN-206ENST00000539417 MBTPS1Q14703 1052 aa17.73■□□□□ 0.43
RPAIN-206ENST00000539417 IL17AQ16552 155 aa17.73■□□□□ 0.43
RPAIN-206ENST00000539417 ZNF618Q5T7W0 954 aa17.73■□□□□ 0.43
RPAIN-206ENST00000539417 CKAP2LQ8IYA6 745 aa17.73■□□□□ 0.43
RPAIN-206ENST00000539417 RDM1Q8NG50 284 aa17.73■□□□□ 0.43
RPAIN-206ENST00000539417 DYDC2Q96IM9 177 aa17.73■□□□□ 0.43
RPAIN-206ENST00000539417 PCDHA12Q9UN75 941 aa17.73■□□□□ 0.43
RPAIN-206ENST00000539417 KAT6AQ92794 2004 aa17.73■□□□□ 0.43
RPAIN-206ENST00000539417 HBP1O60381 514 aa17.72■□□□□ 0.43
RPAIN-206ENST00000539417 OR52Z1P0C646 297 aa17.72■□□□□ 0.43
RPAIN-206ENST00000539417 BMP8BP34820 402 aa17.72■□□□□ 0.43
RPAIN-206ENST00000539417 TECP42680 631 aa17.72■□□□□ 0.43
RPAIN-206ENST00000539417 SLC26A2P50443 739 aa17.72■□□□□ 0.43
RPAIN-206ENST00000539417 PTGDRQ13258 359 aa17.72■□□□□ 0.43
RPAIN-206ENST00000539417 CTTNQ14247 550 aaKnown RBP17.72■□□□□ 0.43
RPAIN-206ENST00000539417 SHHQ15465 462 aa17.72■□□□□ 0.43
RPAIN-206ENST00000539417 TCTN1Q2MV58 587 aa17.72■□□□□ 0.43
RPAIN-206ENST00000539417 TUBE1Q9UJT0 475 aa17.72■□□□□ 0.43
RPAIN-206ENST00000539417 A0A087WWV3 80 aa17.71■□□□□ 0.43
RPAIN-206ENST00000539417 PITPNM1O00562 1244 aa17.71■□□□□ 0.43
RPAIN-206ENST00000539417 ZBTB39O15060 712 aa17.71■□□□□ 0.43
RPAIN-206ENST00000539417 OATP04181 439 aa17.71■□□□□ 0.43
RPAIN-206ENST00000539417 CTSHP09668 335 aa17.71■□□□□ 0.43
RPAIN-206ENST00000539417 THPOP40225 353 aa17.71■□□□□ 0.43
RPAIN-206ENST00000539417 CYP4A11Q02928 519 aa17.71■□□□□ 0.43
RPAIN-206ENST00000539417 RBL2Q08999 1139 aa17.71■□□□□ 0.43
RPAIN-206ENST00000539417 PKP1Q13835 747 aa17.71■□□□□ 0.43
RPAIN-206ENST00000539417 EPHA7Q15375 998 aa17.71■□□□□ 0.43
RPAIN-206ENST00000539417 MTHFD1LQ6UB35 978 aa17.71■□□□□ 0.43
RPAIN-206ENST00000539417 DEFB128Q7Z7B8 93 aa17.71■□□□□ 0.43
RPAIN-206ENST00000539417 ZNF579Q8NAF0 562 aaKnown RBP17.71■□□□□ 0.43
RPAIN-206ENST00000539417 DNAJB3Q8WWF6 145 aa17.71■□□□□ 0.43
RPAIN-206ENST00000539417 BBXQ8WY36 941 aaPredicted RBP17.71■□□□□ 0.43
RPAIN-206ENST00000539417 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.71■□□□□ 0.433e-12■■□□□ 13.8
RPAIN-206ENST00000539417 FTOQ9C0B1 505 aaKnown RBP eCLIP17.71■□□□□ 0.43
RPAIN-206ENST00000539417 SIP14410 1827 aa17.71■□□□□ 0.43
RPAIN-206ENST00000539417 STX6O43752 255 aa17.7■□□□□ 0.42
RPAIN-206ENST00000539417 NBNO60934 754 aa17.7■□□□□ 0.42
RPAIN-206ENST00000539417 GNAT1P11488 350 aa17.7■□□□□ 0.42
RPAIN-206ENST00000539417 PDCP20941 246 aa17.7■□□□□ 0.42
RPAIN-206ENST00000539417 KLRC1P26715 233 aa17.7■□□□□ 0.42
RPAIN-206ENST00000539417 BFSP2Q13515 415 aa17.7■□□□□ 0.42
RPAIN-206ENST00000539417 PLA2G4FQ68DD2 849 aa17.7■□□□□ 0.42
RPAIN-206ENST00000539417 LRRC8DQ7L1W4 858 aa17.7■□□□□ 0.42
RPAIN-206ENST00000539417 TMEM199Q8N511 208 aa17.7■□□□□ 0.42
RPAIN-206ENST00000539417 CAGE1Q8TC20 777 aa17.7■□□□□ 0.42
RPAIN-206ENST00000539417 CEP89Q96ST8 783 aa17.7■□□□□ 0.42
RPAIN-206ENST00000539417 EIF2AK1Q9BQI3 630 aaKnown RBP17.7■□□□□ 0.42
RPAIN-206ENST00000539417 TET1Q8NFU7 2136 aa17.7■□□□□ 0.42
RPAIN-206ENST00000539417 RRN3P2A6NIE6 340 aa17.69■□□□□ 0.42
RPAIN-206ENST00000539417 SLITRK3O94933 977 aa17.69■□□□□ 0.42
RPAIN-206ENST00000539417 C22orf31O95567 290 aa17.69■□□□□ 0.42
RPAIN-206ENST00000539417 SELPP16109 830 aa17.69■□□□□ 0.42
RPAIN-206ENST00000539417 ORC2Q13416 577 aaPredicted RBP17.69■□□□□ 0.42
RPAIN-206ENST00000539417 RILPL1Q5EBL4 403 aa17.69■□□□□ 0.42
RPAIN-206ENST00000539417 TMEM240Q5SV17 173 aa17.69■□□□□ 0.42
RPAIN-206ENST00000539417 FOXD4L5Q5VV16 416 aaPredicted RBP17.69■□□□□ 0.42
RPAIN-206ENST00000539417 ZNF365Q70YC5 407 aa17.69■□□□□ 0.42
RPAIN-206ENST00000539417 ANO5Q75V66 913 aa17.69■□□□□ 0.42
RPAIN-206ENST00000539417 RETREG2Q8NC44 543 aa17.69■□□□□ 0.42
RPAIN-206ENST00000539417 FOXD4L4Q8WXT5 416 aaPredicted RBP17.69■□□□□ 0.42
RPAIN-206ENST00000539417 HSD17B14Q9BPX1 270 aa17.69■□□□□ 0.42
RPAIN-206ENST00000539417 LXNQ9BS40 222 aa17.69■□□□□ 0.42
RPAIN-206ENST00000539417 FAM49AQ9H0Q0 323 aaPredicted RBP17.69■□□□□ 0.42
RPAIN-206ENST00000539417 IL23AQ9NPF7 189 aa17.69■□□□□ 0.42
RPAIN-206ENST00000539417 CHRNA1P02708 482 aa17.69■□□□□ 0.42
RPAIN-206ENST00000539417 P4HBP07237 508 aaKnown RBP17.69■□□□□ 0.42
RPAIN-206ENST00000539417 QARSP47897 775 aaKnown RBP17.69■□□□□ 0.42
RPAIN-206ENST00000539417 PSMC5P62195 406 aa17.69■□□□□ 0.42
RPAIN-206ENST00000539417 TMEM62Q0P6H9 643 aa17.69■□□□□ 0.42
RPAIN-206ENST00000539417 TARBP2Q15633 366 aaKnown RBP17.69■□□□□ 0.42
RPAIN-206ENST00000539417 ZNF484Q5JVG2 852 aa17.69■□□□□ 0.42
RPAIN-206ENST00000539417 SEPT9Q9UHD8 586 aaPredicted RBP17.69■□□□□ 0.42
RPAIN-206ENST00000539417 PCDHA2Q9Y5H9 948 aa17.69■□□□□ 0.42
RPAIN-206ENST00000539417 TRIOBPQ9H2D6 2365 aa17.68■□□□□ 0.42
RPAIN-206ENST00000539417 EVPLQ92817 2033 aa17.68■□□□□ 0.42
RPAIN-206ENST00000539417 DDX11L8A8MPP1 907 aa17.68■□□□□ 0.42
RPAIN-206ENST00000539417 PP2D1A8MPX8 630 aa17.68■□□□□ 0.42
RPAIN-206ENST00000539417 MED24O75448 989 aa17.68■□□□□ 0.42
RPAIN-206ENST00000539417 HSP90AA1P07900 732 aaKnown RBP17.68■□□□□ 0.42
RPAIN-206ENST00000539417 SPATA31C1P0DKV0 1188 aa17.68■□□□□ 0.42
RPAIN-206ENST00000539417 NPEPPSP55786 919 aa17.68■□□□□ 0.42
RPAIN-206ENST00000539417 MGAT3Q09327 533 aa17.68■□□□□ 0.42
RPAIN-206ENST00000539417 PPIGQ13427 754 aaKnown RBP eCLIP17.68■□□□□ 0.422e-8■■■□□ 15.8
RPAIN-206ENST00000539417 MTERF2Q49AM1 385 aa17.68■□□□□ 0.42
RPAIN-206ENST00000539417 BRAPQ7Z569 592 aa17.68■□□□□ 0.42
RPAIN-206ENST00000539417 TDHQ8IZJ6 230 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms