RNA–Protein interactions for RNA: ENST00000539276.6

ATP2A2-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-204ENST00000539276 TRAF1Q13077 416 aa17.08■□□□□ 0.33
ATP2A2-204ENST00000539276 C16orf86Q6ZW13 317 aa17.08■□□□□ 0.33
ATP2A2-204ENST00000539276 CCT8L2Q96SF2 557 aa17.08■□□□□ 0.33
ATP2A2-204ENST00000539276 CCDC77Q9BR77 488 aa17.08■□□□□ 0.33
ATP2A2-204ENST00000539276 INTS9Q9NV88 658 aaKnown RBP17.08■□□□□ 0.33
ATP2A2-204ENST00000539276 TMOD1P28289 359 aa17.08■□□□□ 0.32
ATP2A2-204ENST00000539276 MYL7Q01449 175 aa17.08■□□□□ 0.32
ATP2A2-204ENST00000539276 PPP4R3CPQ6ZMV5 832 aa17.08■□□□□ 0.32
ATP2A2-204ENST00000539276 KCNK18Q7Z418 384 aa17.08■□□□□ 0.32
ATP2A2-204ENST00000539276 FMNL3Q8IVF7 1028 aa17.08■□□□□ 0.32
ATP2A2-204ENST00000539276 ANKS1AQ92625 1134 aa17.08■□□□□ 0.32
ATP2A2-204ENST00000539276 TBC1D31Q96DN5 1066 aa17.08■□□□□ 0.32
ATP2A2-204ENST00000539276 DNAJC12Q9UKB3 198 aa17.08■□□□□ 0.32
ATP2A2-204ENST00000539276 FAM153BP0C7A2 387 aa17.08■□□□□ 0.32
ATP2A2-204ENST00000539276 DR1Q01658 176 aa17.08■□□□□ 0.32
ATP2A2-204ENST00000539276 NAB2Q15742 525 aa17.08■□□□□ 0.32
ATP2A2-204ENST00000539276 FAM153CQ494X1 144 aa17.08■□□□□ 0.32
ATP2A2-204ENST00000539276 MIIPQ5JXC2 388 aa17.08■□□□□ 0.32
ATP2A2-204ENST00000539276 C10orf76Q5T2E6 689 aa17.08■□□□□ 0.32
ATP2A2-204ENST00000539276 KLHDC7AQ5VTJ3 777 aa17.08■□□□□ 0.32
ATP2A2-204ENST00000539276 MCTP2Q6DN12 878 aa17.08■□□□□ 0.32
ATP2A2-204ENST00000539276 C4orf32Q8N8J7 132 aa17.08■□□□□ 0.32
ATP2A2-204ENST00000539276 DNAJC17Q9NVM6 304 aaKnown RBP17.08■□□□□ 0.32
ATP2A2-204ENST00000539276 FAM153AQ9UHL3 310 aa17.08■□□□□ 0.32
ATP2A2-204ENST00000539276 TTI1O43156 1089 aa17.07■□□□□ 0.32
ATP2A2-204ENST00000539276 NT5C2P49902 561 aa17.07■□□□□ 0.32
ATP2A2-204ENST00000539276 GRIK5Q16478 980 aa17.07■□□□□ 0.32
ATP2A2-204ENST00000539276 TNS2Q63HR2 1409 aa17.07■□□□□ 0.32
ATP2A2-204ENST00000539276 CASKIN2Q8WXE0 1202 aa17.07■□□□□ 0.32
ATP2A2-204ENST00000539276 BLOC1S4Q9NUP1 217 aa17.07■□□□□ 0.32
ATP2A2-204ENST00000539276 RGL1Q9NZL6 768 aa17.07■□□□□ 0.32
ATP2A2-204ENST00000539276 CCDC188H7C350 402 aa17.07■□□□□ 0.32
ATP2A2-204ENST00000539276 TRIM49P0CI25 452 aa17.07■□□□□ 0.32
ATP2A2-204ENST00000539276 TRIM49CP0CI26 452 aa17.07■□□□□ 0.32
ATP2A2-204ENST00000539276 TCP11Q8WWU5 503 aa17.07■□□□□ 0.32
ATP2A2-204ENST00000539276 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.07■□□□□ 0.325e-9■■■□□ 15.1
ATP2A2-204ENST00000539276 CELF4Q9BZC1 486 aaKnown RBP17.07■□□□□ 0.32
ATP2A2-204ENST00000539276 AARSP49588 968 aaKnown RBP eCLIP17.07■□□□□ 0.32
ATP2A2-204ENST00000539276 FXR2P51116 673 aaKnown RBP eCLIP17.07■□□□□ 0.328e-8■□□□□ 8.9
ATP2A2-204ENST00000539276 CDK17Q00537 523 aa17.07■□□□□ 0.32
ATP2A2-204ENST00000539276 ZNF543Q08ER8 600 aa17.07■□□□□ 0.32
ATP2A2-204ENST00000539276 GJB7Q6PEY0 223 aa17.07■□□□□ 0.32
ATP2A2-204ENST00000539276 CCDC17Q96LX7 622 aa17.07■□□□□ 0.32
ATP2A2-204ENST00000539276 PNMA5Q96PV4 448 aa17.07■□□□□ 0.32
ATP2A2-204ENST00000539276 PLCB1Q9NQ66 1216 aa17.07■□□□□ 0.32
ATP2A2-204ENST00000539276 USTQ9Y2C2 406 aa17.07■□□□□ 0.32
ATP2A2-204ENST00000539276 GRID2IPA4D2P6 1211 aa17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 MDH1P40925 334 aaKnown RBP17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 SNX1Q13596 522 aa17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 JMJD4Q9H9V9 463 aa17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 UBE2TQ9NPD8 197 aaPredicted RBP17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 NKIRAS1Q9NYS0 192 aa17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 MEFVO15553 781 aaPredicted RBP17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 ORC2Q13416 577 aaPredicted RBP17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 ABCB5Q2M3G0 1257 aa17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 ZNF746Q6NUN9 644 aaPredicted RBP17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 PACS2Q86VP3 889 aa17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 ZNF473Q8WTR7 871 aaKnown RBP17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 STK38LQ9Y2H1 464 aa17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 GMNCA6NCL1 334 aa17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 ZNF263O14978 683 aa17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 ZNF365Q70YC5 407 aa17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 TAOK1Q7L7X3 1001 aa17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 USP38Q8NB14 1042 aa17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 AENQ8WTP8 325 aaKnown RBP17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 HOOK2Q96ED9 719 aa17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 TRIM51Q9BSJ1 452 aa17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 PARVGQ9HBI0 331 aa17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 ABCC6O95255 1503 aa17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 FOSP01100 380 aaPredicted RBP17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 ACTN3Q08043 901 aaPredicted RBP17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 BIRC3Q13489 604 aa17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 DRAP1Q14919 205 aaPredicted RBP17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 ZKSCAN8Q15776 578 aaPredicted RBP17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 OTUD6AQ7L8S5 288 aa17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 PHLDB2Q86SQ0 1253 aa17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 NEK9Q8TD19 979 aa17.06■□□□□ 0.32
ATP2A2-204ENST00000539276 MYO1FO00160 1098 aa17.05■□□□□ 0.32
ATP2A2-204ENST00000539276 BBOX1O75936 387 aa17.05■□□□□ 0.32
ATP2A2-204ENST00000539276 MKRN4PQ13434 485 aaPredicted RBP17.05■□□□□ 0.32
ATP2A2-204ENST00000539276 CCDC197Q8NCU1 140 aa17.05■□□□□ 0.32
ATP2A2-204ENST00000539276 MXD3Q9BW11 206 aa17.05■□□□□ 0.32
ATP2A2-204ENST00000539276 EPN3Q9H201 632 aa17.05■□□□□ 0.32
ATP2A2-204ENST00000539276 TMOD4Q9NZQ9 345 aa17.05■□□□□ 0.32
ATP2A2-204ENST00000539276 DAGLAQ9Y4D2 1042 aa17.05■□□□□ 0.32
ATP2A2-204ENST00000539276 MYBP10242 640 aa17.05■□□□□ 0.32
ATP2A2-204ENST00000539276 PRLRP16471 622 aa17.05■□□□□ 0.32
ATP2A2-204ENST00000539276 COPB2P35606 906 aa17.05■□□□□ 0.32
ATP2A2-204ENST00000539276 HIBCHQ6NVY1 386 aaPredicted RBP17.05■□□□□ 0.32
ATP2A2-204ENST00000539276 REEP2Q9BRK0 252 aa17.05■□□□□ 0.32
ATP2A2-204ENST00000539276 LARSQ9P2J5 1176 aaKnown RBP17.05■□□□□ 0.32
ATP2A2-204ENST00000539276 SIK3Q9Y2K2 1263 aa17.05■□□□□ 0.32
ATP2A2-204ENST00000539276 MYCLP12524 364 aaPredicted RBP17.05■□□□□ 0.32
ATP2A2-204ENST00000539276 NMT1P30419 496 aaKnown RBP17.05■□□□□ 0.32
ATP2A2-204ENST00000539276 FAM133BQ5BKY9 247 aaKnown RBP17.05■□□□□ 0.32
ATP2A2-204ENST00000539276 TACO1Q9BSH4 297 aaKnown RBP17.05■□□□□ 0.32
ATP2A2-204ENST00000539276 ARHGEF10LQ9HCE6 1279 aa17.05■□□□□ 0.32
ATP2A2-204ENST00000539276 TULP2O00295 520 aa17.04■□□□□ 0.32
ATP2A2-204ENST00000539276 RPSAP08865 295 aaKnown RBP17.04■□□□□ 0.32
ATP2A2-204ENST00000539276 HDLBPQ00341 1268 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms